Cyprinodon variegatus (sheepshead minnow): 107092901
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Entry
107092901 CDS
T06110
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107092901 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107092901 (trim33)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107092901 (trim33)
Protein kinases [BR:
cvg01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
107092901 (trim33)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107092901 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
107092901
NCBI-ProteinID:
XP_015243087
Ensembl:
ENSCVAG00000001996
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MADNKGDEDMEPPANPDSVPTAMAEEQLNKNSGDKVVIIEADSKQDGETESQKDANVEPS
ATTEGEHESSGGATEATAAAPAPAAVVAASILTEADGSVSNVASPAETISANPEPLATET
APVADPPASGNTTETSPASAAPAAAATPVPTPISLLDTCAVCKQSLQTRDCEPKLLPCLH
SFCLKCIPQPDRQISVQVPGPHGQTDTHIVNVMRCSVCHQDYKQSDIIDNYFVKDTTEAT
STSDEKTAQVCTSCEDNAGTVGFCVECGEWLCKTCVEAHQRVKITKDHKIRTKEDADAAA
ESGNTAGQRLVFCPIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNHKGII
EANMAKLQDKKNYVHYSVSQLQNRLKELGETHRKVEHEIKIAVFTLINEINKKGKALLQQ
LESVNKERSMRLMAQHKDTTQLAQQIHHVLNFCNWAITSGSSTALLYSKRPIMYQLRQLF
KARLEPAPQSNGAVRFFCDPTFWAKNVVNLGNLVIEKPPPSAQPPSVMLGGPAISPGQGH
PGKHPGQINLAQLRLQHMQQAAYAQQKHHHQQQQQHQQQQQQQQQQQQQIQQQMRLASQM
SQQHARQGGPAMVQQQPPRLISMQQLQRAGTINGGPSPSMFPSSHHMRLAGPPQGRMPTA
QPRHNGQQYAPLMQPQLQRQMSLESEMSHQRFRFLLQSGHSNPGHAGPFPVASLHNASPT
SPTSASMAGAHAHRGPASPIVGPIELIPSVTNPENLPCLPEIPPIQLEDAGSSNLGHLLS
RYISASQHQLGSTDMNPSPGLSTLSPGSSGLSNAHTPARPSSTSSTGSRGSCSSAGRAGT
GGGATAEQVKVKKEPGTGDEYGCPSSSVKTERGKDSGRSACMMSSPENSPLGVASIGQDA
FRGVGERIKTEPASETSCSGLNGTSSSTTNTISTATSSSTTSQGGPLTNGSIDKRGGTND
ATQGAGGKDDDPNEDWCAVCINGGDLLCCDRCPKVFHMKCHVPTIKIIPQGDFLCTFCRS
IANPEIEYCDESKRVKGDQSLGPEDQRRCERLLLYIFCHELSMGFREPVSSSVPNYYKII
KQPMDLKKVKKKLQLRSSQYYKSIQEFVDDMRLIFKNCAKYNEMSRIIRVYDEEKEINTQ
AGSEMAISGKAVSLYFEEKLQEMFPNQTFPDSPDPESSDEREREEVETEDSEDDIQPRRK
RLKTDEKVFHIK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaggcgatgaggatatggaaccgccagctaatccggattcagtacct
actgccatggccgaagagcaattaaacaaaaatagtggcgataaggtagtaattatagaa
gcggattcgaagcaagatggagaaaccgagtcccagaaagacgctaacgtggagcctagc
gccaccactgaaggagagcacgagagcagtggcggggcaactgaggctactgccgccgct
cccgctcccgctgctgttgttgcggcgagcatcttaactgaagccgacggtagcgttagc
aatgttgctagcccggctgagaccattagcgccaatccagaaccgttagcaactgaaaca
gcacccgttgcggatcctccagctagcggaaacacgacggaaacatctccggcttcagct
gccccggcggcggcggccaccccggtacccactcccattagtttactggatacgtgcgct
gtgtgtaaacaaagtcttcagactcgagactgtgaaccaaaacttttgccctgtctgcac
tctttctgcctaaaatgcatcccgcaaccggacagacagataagcgttcaggtgcctggg
ccacacgggcaaacggatacgcatatagtaaatgttatgagatgttcggtttgccaccag
gactacaaacaaagcgacattattgacaactactttgtcaaagacacaacagaagctacc
agcacatctgatgaaaaaactgcacaggtgtgcacaagctgtgaagacaatgctgggact
gtcggcttttgtgtggagtgtggcgaatggctgtgtaaaacgtgtgtcgaggcccatcag
agagtgaaaattaccaaggaccacaaaattcgtacaaaggaagatgcggatgctgccgct
gagtcgggaaacacggcaggacagaggcttgttttctgtcccatccataaacaagaacct
ctgaaacttttctgcgaaacatgtgacacgttaacatgtcgggactgccagcttctggag
cacaaggagcacaggtaccagtttttggaggaagctttccagaaccataaaggaatcatc
gaggccaacatggccaaactacaggataaaaagaactatgtccattattctgtctctcag
ttgcaaaacaggttgaaagagctgggagagactcatagaaaagtggaacatgagatcaag
attgctgtatttactctcataaatgaaatcaacaaaaagggcaaagcgttacttcagcag
ctggagagcgtgaacaaagagaggagcatgaggcttatggctcagcataaggacaccacc
cagctggctcaacagatccaccatgtgctcaacttttgcaactgggccatcacttctggc
agcagcacagcgttactctacagcaagaggccgatcatgtaccaacttcgccagctcttc
aaggcaagactggagccagccccacagtccaatggagccgtccggttcttctgtgatcca
accttctgggccaaaaatgttgtgaatttaggtaatttagttattgaaaagcctcctcca
tcggcacaacctcccagtgtgatgttaggtggaccggccatttcaccaggacaaggtcac
ccaggcaaacatccaggacagatcaacctggctcagcttcggctgcagcacatgcaacaa
gctgcttatgcacagcaaaagcatcatcaccaacagcagcagcagcatcagcaacaacaa
caacaacaacaacaacaacagcagcagattcagcaacaaatgcgtttagcctcccaaatg
tcccagcagcatgccaggcagggtggcccggctatggttcagcagcagcctcctagactc
atcagcatgcagcagcttcagagagccgggactattaacggtgggcccagtccctctatg
ttcccctcctcccatcatatgcgtctagctggtcccccacagggccgaatgcccacagct
cagcccagacacaacggacagcagtatgcacctctgatgcagcctcagttgcagagacag
atgtctttagaatctgagatgagccaccaaaggtttcgtttcttactccaatcagggcat
tccaacccgggacacgctggcccctttccggtggcatccctgcataacgccagtcccacg
agtcccaccagcgccagcatggccggggcccatgctcaccgtggtcctgccagccccatc
gttggtcccatcgagcttatcccctctgttactaatcctgaaaaccttccctgcctacct
gagatcccgccaatccagttggaagatgcaggttccagcaatcttgggcatcttctttcc
cgttacatctcagcgagccaacatcagctcggctcaacagacatgaacccctcacccggc
ctgtccaccctctctcctggatcatcaggtctgtccaacgctcacacaccagcgagaccc
tccagtacatcaagtacaggcagcagaggcagctgcagctctgctggcagagcgggaacc
ggcggtggagcgactgcagagcaggtgaaggtgaagaaggaacctggtactggggatgag
tacggctgtccctcctcttctgtgaagactgagcgaggcaaagactctgggaggagcgcc
tgtatgatgagcagtccagagaacagcccactcggagttgcatccataggccaggatgcc
ttcaggggtgttggagaacgcatcaaaacagaaccagcatctgagacgtcttgttccggc
ctgaacggcacatcctcctctaccactaacactatatccaccgctacctcgtcgtccacc
acaagtcagggaggccctctcaccaacggaagcatagacaagagaggtgggactaatgat
gcgacgcagggtgctggtgggaaagacgacgaccccaatgaggactggtgtgctgtctgt
atcaacggtggtgaccttctgtgctgcgaccgatgtccgaaagtgttccacatgaaatgt
cacgttccgaccataaaaatcatcccacagggtgactttctctgcacgttctgccggagt
atagccaaccctgagatcgagtactgtgatgaaagcaagagggtcaaaggcgatcagagc
ctgggtcccgaagatcagcggagatgcgaacggctcctcctgtatattttctgtcatgag
ctcagcatgggctttagagaacccgtttcaagctctgtacccaactattacaagatcatt
aagcagcccatggacttaaagaaggtgaagaagaagctgcagctgcgcagctcccagtac
tacaaatccatccaggagtttgtggatgacatgcgccttatcttcaaaaactgtgcaaaa
tacaacgagatgtctcgaataatccgagtttatgatgaggagaaagagattaatacccag
gcgggatcggagatggcgatatccggtaaggcggtgagcctgtactttgaggagaagctt
caggagatgttcccgaatcaaaccttccccgactcgccggatccagagtcgtcagacgag
agagaacgagaggaggtggaaacggaggactcggaggacgacattcagcccagacgtaaa
cggttgaaaacggacgaaaaggtttttcacatcaaatag
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integrated database retrieval system
