Cyprinodon variegatus (sheepshead minnow): 107092959
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Entry
107092959 CDS
T06110
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
cvg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107092959 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107092959 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvg03016
]
107092959 (tnpo3)
Transfer RNA biogenesis [BR:
cvg03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
107092959 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
AtzG-like
Motif
Other DBs
NCBI-GeneID:
107092959
NCBI-ProteinID:
XP_015243194
Ensembl:
ENSCVAG00000020285
UniProt:
A0A3Q2DDG5
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MEGGKPSLTLVYQAVQVLYHDPDPAGKERASLWLGELQRSMFAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNDDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSNTV
VSLLTTCVEKTGNDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQILQRDETSTN
LHEAASDCVCSALYAIENVDTNMPLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDVN
LHNIFRPYIQRLLHCLARHCQLDPDHEGIPEETDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGSPPWEVTEAVLFIMASIAKSVDPENNPTVSEVLQQVVLLPENVHIAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLEIARSLDSFALSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVLALKKLLAEQS
TNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNSLRNHPDTVDDLFRLATRFVQRSPVTLLGSTIIVHIIQCA
IAAASLDHRDANCSVMKFIRDLVHTGVGNDHEEDFELRKRLIGQAMEQNGQQLINQLLHS
CCFCLPPYTLPDVAEVLWEIMLFDRPMFCRWLENALKGLPKETAGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggcaaaccgagcctgacgctggtctaccaggcggtccaggtcttgtaccac
gacccggacccggccgggaaggagcgagcctcgctgtggctcggggagcttcagagatcg
atgtttgcctgggagatctccgaccagctgctgcagcttaagcaagacgtagaatcatgt
tacttcgccgctcagaccatgaagatgaagatccaaacttccttctatgagcttcctcca
gagacccacaacgcactgcgggactcgctgttgacccacatccagaacctcaaagacttg
tcccccatcatcgtcactcagctggctctggccatcgccgacctcgccctgcagatggcc
tcttggaaaggctgcgttcacacgctcatagagaaatacaacgatgacatcagttcaatg
ccgttcctcatcgagatcctgacggtgctgccggaggaggttcacagccgctctttgagg
atcggagccaaccgcaggacggaaatcattgaggatttggcttattactccaacacagtg
gtgtccctgctgacaacatgtgtggagaagacgggaaacgatgagaaaatgcttatcaag
gtgttccgctgtctgggcagttggttcaacctcggagtcctggacagcaacttcatggcc
agcaaccagctgctcatggttctcttccaaatcctgcaaagggatgaaacgtctacaaac
ctgcacgaagcagcgtccgactgcgtctgctcggccctctacgccatagaaaacgtcgac
acaaacatgcctctggctctgcagctcttccagggcgtcctgacgttggagacggcctat
cacatggccgtggcccgagaggacctggacaaggtgctgaactactgcaggatcttcacc
gagctctgtgagacgttcttagaaaccactgtcagaactccgggtcaggggatgggagac
ctgaggacgctggagctgctgctcatctgtgcaggacacccgcagtacgaggttgttgag
atttctttcaacttctggtaccgtctgggagaacatctctacaaaataaacgatgtaaat
cttcacaacatcttccgaccctacatccagagactcctgcactgtttggcgcggcactgc
cagctcgatccggaccacgagggaattccagaggaaacagacgattttggggaattcagg
atgagggtttcagacctcgttaaggatgttattttcctggtgggatccatggaatgcttt
tctcagttgtattctacactaaaagatggcagtcctccgtgggaggtgacggaagccgtc
ctcttcatcatggcttccatcgcgaagagcgtcgacccagagaacaacccgacggtgtct
gaggttctgcagcaggtggtcctgcttccggaaaacgtccacatagctgtgcgctacacc
agcatcgagctggtgggagagatgagcgaggtggtggaccggaaccccagattcctggac
ccggtgctgaactacctgatgaaggggctcagagagaagcctctggcgtcagcggcggcc
aaggccatccacaacatctgctccgtgtgccgggatcacatggctcagcacttccagggt
ctgctggagatcgctcgctctctggactccttcgctctgtccaccgaggctgcggtcgga
ctcctcaaaggtacggcgctggtcctggcccggctgcctctggagaagatagcagaatgt
ctcagcgacctgtgtgctgttcaggttctggcactgaagaagcttctggcggaacaatct
acgaacgggaagtcagcggatcccacggtgtggctggacaggctggccgtcatcttcaga
cacaccaaccccatcgtggagaacggacagacccatccgtgtcagaaagtcatccaggag
atctggccggttctgtcggagacgctcaacgctcaccaggcggacaaccggatcgtggag
cgctgctgccgctgcctccgcttcgccgtgcgctgcgtcgggaaaggctccgcctccttg
ctgcagccgctcgtcactcagatggtgagtgtgtaccaggtgtatccccactcctgcttc
ctgtacctgggcagcatcctggtggacgagtacggcatggaggagggctgcaggcagggg
ctgctggacatgctgcaggctctctgcatgcccaccttccagctgctggagcagcccaac
agcctgaggaaccaccccgacaccgtggacgacctgttcagactagccaccagatttgtc
cagaggagtcccgtcacgctgctaggcagcactatcatcgtccacatcatccagtgcgcc
atcgccgccgcatccctcgaccaccgggacgccaactgcagcgtgatgaagttcatccga
gacctggtccacaccggagtcggcaacgatcacgaggaggactttgagttgaggaagcgt
ctgattggtcaggccatggagcagaacggccagcagctcattaaccagctgctgcactcc
tgctgcttctgcctgccgccatacacgctgccggacgtggccgaggttctgtgggaaatc
atgctgttcgaccgacccatgttctgccgctggctggaaaatgctctgaaaggcttaccg
aaggagacggcgggaggagccgtgaccgtcacccacaaacagctgacggacttccacaaa
caggtgaccagtgccgaggagtgcaaacaggtgtgctgggccatccgagagttcaccaga
ctgtaccgatag
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