KEGG   Cyprinodon variegatus (sheepshead minnow): 107093027
Entry
107093027         CDS       T06110                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107093027
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cvg01009]
    107093027
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvg03021]
    107093027
Protein phosphatases and associated proteins [BR:cvg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107093027
Transcription machinery [BR:cvg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     107093027
    Little elongation complex (LEC)
     107093027
SSDB
Motif
Pfam: ELL Occludin_ELL EzrA Seryl_tRNA_N SWIRM A_deaminase_N
Other DBs
NCBI-GeneID: 107093027
NCBI-ProteinID: XP_015243313
Ensembl: ENSCVAG00000016765
UniProt: A0A3Q2EBY1
LinkDB
Position
Unknown
AA seq 618 aa
MSALREQRCYGLSSGKLNPGSNVSVFHVKLTDSAARAIGSFHNGKSWSSCPTITFNGNQG
RIAIPCSENGNEARIFTFGVTNVARNSPHGSFDCVKQRSIGAAEELTCLGVIQKKMTVNA
TDDSYDKARQSLAQAEEETRSRGAIVIKNGARYQGKKVTVRAPAPALAKLTKPKYSSHSL
LNIKRGVSTSRPRKGPCPVSRKSDIQDRPLRERVMHLLALRPYKRPELILRLQKDGLPEG
DKDLLDSVIMEVGQLSNRDSTFVLKDGLYKELQKDWPGYTSGDQQLLKRILVRRLFQPQQ
NLLTVPEAQVSPLRETPNSSPAHRPKHSLLDESAEPLASKKPRISLLSRKSASENSRRRS
SKQATRTDAGAKAEEEQNNSLDPKRLFESLSAVCQQEAEVAKRLEPKDSPQEEPKEPNEQ
QKPKSDGPPPPLMVPDLSRHAVRKKKSKHKDQEKDGWRDGKERRKEKSCSSDYSCKDPSE
CKESSGLFDSNEPQADAVTADYLSKYVVISSQNQRQSYKQDFNKEYSEYRDLHARIDSVT
QQFMELDTQLKQLHQESHKYKTVRNKILQEYRKIKKSNPNYNQDKVRCEYLHNKLAHIKK
LISDFDQQQLSVDHISAK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgtcggctctgagggagcagcggtgttacgggctttccagcggtaaactgaaccccggc
tctaacgtctccgtttttcacgtaaaactcactgacagcgcggcaagagccatcgggagc
tttcacaacggcaagagctggtcttcctgtcctaccatcaccttcaatggaaatcaaggg
agaattgccatcccttgctcagagaatggaaatgaagcgcggatcttcacctttggagtg
actaacgtcgctcgcaatagtccgcatgggagcttcgactgtgtcaaacagcgcagcata
ggtgccgccgaggagctgacatgtcttggagtgattcagaagaagatgacggtcaacgcc
acagatgattcgtacgataaagcccgccagagcttggcccaggcagaggaggagacccgc
agccgaggggccatcgtcatcaaaaacggagcgcgctaccagggtaagaaggtgactgtg
cgagccccagctcctgcactggccaaactgaccaagcctaaatactcatcccactccctc
ctcaacattaaaaggggggtcagcacgtccaggcccaggaagggtccctgtcctgtgagc
agaaaaagtgacatccaggatcggcccctcagggagagagttatgcacctgctggctctg
aggccgtacaagaggcctgagttgatcctgaggctgcagaaagacgggcttccagaagga
gacaaagatctgctggactcggtcatcatggaggtgggacagctcagtaacagagacagc
acatttgttctgaaggacggcctttataaggagctgcagaaggactggccaggatacacc
tcaggggaccagcagcttctgaagcgcatcctcgtcaggagactttttcaaccacagcag
aacctcctcactgtccccgaggcgcaggtcagcccccttcgagagacccccaactcttcc
ccagcacaccgcccgaaacactcccttctagatgaatccgctgagcctctggctagtaag
aagcccaggatatccctcctatcaagaaaatcagccagcgagaattcaagacggaggtcg
tcgaaacaagcgacccggacagacgcaggagccaaagcagaagaggagcaaaataactcg
cttgaccctaaaagactctttgagtcgctgtcagcagtttgtcaacaggaagcagaagtg
gctaaaaggctggagccaaaggattctcctcaagaggaacctaaagagccaaatgagcaa
cagaaacccaaatctgatgggcccccgccgcccctgatggtgcccgatctgagcagacac
gcagtcaggaagaagaagagcaaacacaaagatcaggagaaagatggatggagagacgga
aaggaaagaagaaaagagaaaagttgcagttcggattattcatgtaaagatccttcggag
tgcaaagaatccagtggattgtttgactccaatgaaccccaagctgacgccgtgacagcc
gactatttatcgaaatatgtggtgatctccagccagaaccagagacagagttacaaacag
gactttaataaggagtacagcgagtacagagatttgcacgctcgcatcgacagcgtcaca
cagcagttcatggaactggacactcagctcaagcagcttcaccaggagtcgcataagtac
aagacggttcggaataaaatccttcaagagtaccgcaaaattaaaaagtctaatcccaac
tacaatcaggacaaagttcgctgtgagtatttacacaacaagctggcccacatcaagaag
ctcatatcggactttgaccagcagcagctctctgtggatcacatcagtgccaaatga

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