Cyprinodon variegatus (sheepshead minnow): 107093182
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Entry
107093182 CDS
T06110
Name
(RefSeq) protein VPRBP-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107093182
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107093182
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107093182
Protein kinases [BR:
cvg01001
]
Serine/threonine kinases: Other
Other
107093182
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107093182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
LisH
WAPL
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
DUF948
TetR_C_6
Menin
Motif
Other DBs
NCBI-GeneID:
107093182
NCBI-ProteinID:
XP_015243536
Ensembl:
ENSCVAG00000002473
UniProt:
A0A3Q2C9S2
LinkDB
All DBs
Position
Unknown
AA seq
1572 aa
AA seq
DB search
MSSQDEDSSAALSAVLSSAWAAALSAAVAVATSVDAKADLGKLLDEWEETRHATTEQLVS
TLTKISELIEKETEEFYKSDPDPFDDRHPERAHPNCMLGQLLRMIFINDEFTNELLDTYI
MTSRDVALNTAACRLFLNIGPGLDTVVVFEEKEGLLAKIFSWAREAERPLCVYATGLLAR
AMSNQELATNHREENAKLVSMMIKRLHELQSAELTSPFSPTHTAQNLPPDSQDEAAHTSV
VTKKRRIQTEEEDGSEDKEGKENNGESSRSMSKVKSPAQRNGGRSSSSRLLPNFVYQASP
HPASKEKEETQGGEEEGRGKKLNENGRKAKQKQDCTTSISGAEEEGEKADTSQQPSSSSS
WAEMSPILIGSDYRLSPLSPAMEQRLILQYLTPLGDYQELLGVFMKLDTLSLMMNYIDLR
KTKNVQLTFDALLYLASLLLHKKFSSEFTAHGGVQKLLEIPRPSMAATGVSLCLYYLAYN
QDAMERVCMFPDGVLSDMVSYALWLLESSHASGICHATMFFSISFSFRAVLQLFDQLDGL
RRLVNLISTLEILNAENAQRLSDDQIFSSRQTAKHTCMALRKYFEAHLAVKTEQVKRSLN
TSENGTIIPHQPSYKAYTYTREQIIEMMEFLIECGPPQLHWEPVEVFYKLSCVPLMLKLI
SAACDWSTYNGRSDTARYALDIIAVLTVVPKVQLVLAGTVEVYDENGSLVPTIGMSIILG
VAEGEVFPNDAEIQKSALQVIINCVCAPDQSRNSVGAFAVSPLKKPLHPQQSPPIHNRVL
SHMWQVVQNNNGIKVLLSLLSVKVPITDADLIRALACKALVGLSHCSAIRQIISKLPLFT
SSQIQQLMKEPVLQDKRSEHVLFCRYAVKLTERVSGKPIIMGADVSLARLQKDNVVAQTR
ITFSEKELLILIRNHLVAKGLHDTANTLVKEANLPAAPLGPNSTLSCVTPTSSTSRPRTC
RLASGMSARIAGHVGASPLSSGHSAPSVSRSPAASHMSGSWASTSAVPTTPPQPAPYGQS
SHLSGRILFSRERQMASCNSGKKLRALKQKSDHGAFVQTPAMKRQLELHLPSPPTLDNII
TEYLREQHARCPNPVTTCPPFSLFTPHRCPVSKLRRQAPPNFTARLGSRVLYPRYGGQDR
GSLDRHLIFSRFRPMSVFHEGDGGDSSFTCCAFSACERFLMLGTCSGQLKLYNIFSGEEE
ASYTCNGSAITYIEPSRDGNLVLTSASWRVPLSALWSMDGVFSMKTSFGEDHHVEFSKLS
QDRVIGTKDEVAHIYDIQTGHKILTLNDPALANDYKRNCATFNPTDDLVLNDGVLWDVRA
SRAIHKFDKFNMNLSGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCGLVFNSTGTIM
YGAMLQDDDEHDSISGQVASPFGSSFRTFDATDYKPIATLDVKRNIFDLRTDTKDYHLAV
IENQDTTSMDTVCRLYQVGRLKLAEEGDDDDQDQDQDDDDDSSDSDDDDDDDDDLDINPL
IEELADINEQENVEDANTSDEIQAILGNSSDYDPSNIDSEDSDLEDSILNSSWLREESDD
EDSDIFGYMSDV
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccaagatgaagactcatcggctgccctgtctgctgtcctgtcctctgcatgg
gcggctgctttgtctgctgcagttgcagttgccacgtcagtggacgccaaagctgatctg
ggcaaactgttggatgagtgggaagagacaaggcatgctaccacagagcagctggtgtcc
accttaaccaaaatatctgagctgatcgaaaaggagacagaagaattttacaaatctgat
cctgacccctttgatgatcgtcatccagaaagagctcacccaaactgtatgctgggtcag
ctgctgaggatgatctttataaatgatgaattcactaatgagcttttggacacgtatatc
atgaccagtcgagacgttgcccttaacacagcagcctgtcgcctctttctgaacattggc
ccaggcctggataccgttgttgtctttgaagagaaggaaggcttgttggcgaagatattc
agttgggcccgcgaagctgagcgacctctttgcgtctacgccacgggcctgctggccaga
gccatgagcaaccaggagttggcaactaaccacagagaggagaacgctaaactggtatcc
atgatgatcaaacgtctacatgagctgcaatctgcagagctcaccagtccctttagtccc
acccacaccgcccagaacctacctccagactctcaggatgaagccgcccacacctcagtt
gtcacaaaaaaacggcgaatccagactgaagaggaagatggctcagaagacaaggaggga
aaggagaataatggggagagtagtaggtcaatgtcaaaggtcaaatctcctgcccagaga
aacggtggccgctcctcctcctctcgccttctcccaaactttgtgtatcaagcgagcccg
catcctgcttcaaaagagaaggaagaaactcagggaggagaagaagaaggaagagggaag
aaactaaatgagaatggaaggaaggctaaacagaagcaggactgcaccacctccatcagt
ggggctgaggaggagggagagaaggcggataccagccagcagcccagcagcagctcctcc
tgggctgagatgagccccattctgattggctccgactacagactgtcgccgttgagtcca
gccatggagcagaggctcatcctgcagtatttgacaccgcttggagattaccaagagctg
ctgggagtctttatgaaactggacactctgtcgctgatgatgaactacattgacctcagg
aagaccaaaaatgttcagcttacttttgatgctctgctgtatctcgcctcactgctcctt
cataagaagttctcgtctgagttcactgctcacggaggagtgcagaaactcctggagatc
ccgaggccctccatggcagcaacaggcgtttctctctgcctttactatctggcttacaat
caggatgcaatggagagggtttgcatgtttccagacggcgtgctgtcagacatggtgtca
tacgcgctgtggttgctggagtcatcccatgcttcgggcatctgccacgccaccatgttt
ttctccatttctttttcattcagggctgtgctgcagctcttcgaccagctggatggtctc
cgcaggctggtcaatctgatcagcactttggagatcctgaacgcagagaatgcacagaga
ttaagtgatgatcagatcttctcaagcagacagacagccaagcacacctgcatggcgctg
cgcaagtactttgaagctcacctggcagtgaagactgaacaggtgaaacgctctttgaac
acttcagaaaatggcaccattattccccatcagccatcttacaaggcctatacatacacc
agagagcaaatcattgagatgatggagttccttattgaatgtggacctcctcagctccac
tgggagccggtcgaagttttctacaagttgtcctgtgttcctttaatgctgaagctcata
tcagccgcctgcgactggtcaacctacaacggcaggagcgacacagctcgctatgctttg
gacatcatagccgtgctgacagttgttcctaaagtccagttggtgctggcgggtacagtg
gaggtttatgatgaaaatggatcccttgttcccactataggtatgagcatcattctggga
gtggccgaaggtgaggtgttccctaacgatgccgagattcagaagtctgccctgcaagtg
ataataaactgtgtgtgcgctccagaccagagccggaacagcgtcggggctttcgctgtc
tcccccctcaaaaagcctttgcacccccagcagtccccgcccatccacaacagggtgctt
tcccacatgtggcaagtggtgcagaacaataatggcataaaggtgcttctgtctctgctg
tccgtgaaggttcctatcacagatgcagacctgatccgagctttggcctgtaaggctctg
gttgggctcagtcattgctctgccatcaggcagatcatcagcaagctgccgcttttcacc
agcagtcagattcagcagctcatgaaggagccggtgctgcaggacaaacgcagcgaacac
gttctgttctgtcgctatgccgtcaagctgaccgagcgagtgtctggcaagcccatcatc
atgggtgctgacgtgtcactggcccgcttgcagaaggacaacgtggtcgcccagactcgc
atcacgttttctgagaaggagctcctcattctgattaggaaccaccttgtagccaaagga
ctccatgacacagccaacaccctggttaaggaggctaatctacctgcagctcctctgggt
ccaaactccaccctctcatgtgtcacccctacctcctccacctccagacctaggacttgt
cggttagccagcgggatgtcagctcgcatcgccggccatgtcggagcctctcctctgtcc
tcaggtcattctgctccctcagtttcccgatccccagcggcgtctcacatgtcaggttcc
tgggcatctacctcagctgttccaactactcctcctcagcctgcaccctatgggcagagc
tcgcatctttctggccggatcttgttttcgcgagaacgacaaatggccagctgcaactca
gggaaaaaacttcgtgcactgaaacagaagtccgaccacggtgcttttgtacagacccca
gctatgaaaaggcagctggagctccacctgccgtctccgccgacccttgacaacatcatc
acagagtacctgagggagcaacacgcccgttgtcccaatcccgtcaccacctgtcctccg
ttttcccttttcacccctcaccgctgcccagtgtccaaactgaggcgtcaggctcccccc
aacttcaccgcccgtctggggagcagggtgctgtatccacggtacggtggtcaggataga
ggaagcctggacagacacctgatattcagcaggtttcgccccatgtcagttttccatgaa
ggcgacggaggcgacagcagtttcacctgttgtgccttttcagcctgcgagcgcttcctg
atgctgggaacctgctccggtcaactcaagctttacaacatcttctctggagaggaggag
gccagctacacctgcaatggatcggccatcacttacatcgagccttcccgggatggtaac
ttagttcttacctctgcctcctggagagtccccctgtcagctctgtggagtatggacggt
gtctttagcatgaaaacctcatttggagaggatcaccatgttgagttcagcaaactctct
caggacagagtaattggtactaaggatgaagtcgcacatatctatgacatccagacgggc
cataagatcctgaccctgaacgaccctgcactggccaatgactacaagagaaactgtgcc
accttcaaccccacggatgacttggtgctaaacgacggggtcctgtgggatgtgcgcgca
tcacgggccatccacaagttcgacaagttcaacatgaacctcagcggggttttccatcca
aacgggctggaggtcatcatcaacacagagatttgggacctgaggaccttccatctgctc
cacacggttcctgctctggatcagtgcgggttggtctttaacagcactggcaccatcatg
tatggagcgatgctacaagatgatgatgagcacgacagcataagcgggcaggtggcgagt
ccctttggctcctccttcagaacttttgatgctacagactacaagcctatcgccaccctg
gatgtaaagaggaacatctttgatttgcgtacggatactaaggactaccatctggctgtc
atagagaaccaggatacaacgagcatggatacggtatgtcgtctatatcaagttggacga
ctgaaactggcagaagaaggagacgatgacgatcaggatcaagatcaggatgatgatgat
gattcgtcagattcagatgatgatgatgatgatgacgatgatctagacataaaccccctc
attgaggaactggctgatattaatgaacaggagaacgtggaggacgctaacactagtgat
gagattcaggctattcttggtaatagcagtgattatgaccctagtaatattgactcggag
gactcagacctagaagattcaatcctcaactcatcatggttaagagaagaatcagatgat
gaagactccgacatatttggatacatgtctgacgtatag
DBGET
integrated database retrieval system
