Cyprinodon variegatus (sheepshead minnow): 107093193
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Entry
107093193 CDS
T06110
Name
(RefSeq) contactin-4-like isoform X1
KO
K06762
contactin 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107093193
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
Contactins
107093193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
V-set_CD47
Ig_C17orf99
Pur_ac_phosph_N
C2-set_2
Ig_5
Tissue_fac
C2-set
fn3_2
Ig_4
Interfer-bind
fn3_4
Motif
Other DBs
NCBI-GeneID:
107093193
NCBI-ProteinID:
XP_015243562
Ensembl:
ENSCVAG00000002233
UniProt:
A0A3Q2G998
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MMLLWKLLLLQSLMGCLAERSVLQSPAFTKQPGSIVYPVETVGNNREVVFSCEAQGTPPP
TYRWKLNGTEVIPKAGSHYSLSGGNLRISRLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLENFKTHKRSSVSVREGQGVVLLCGPPPHSGDLIFSWIFNEYPNFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVIH
VAKGSTVKLECFALGNPAPTIGWKRVDNVPFPRKVDMRKASGVLEIPYFQQEDAGTYECV
AENSRGMNTVKGKLSFYAPPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRWMKNGENL
ESAEERIQVANGILSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQLKS
QTLVKVGGDILIECKPKMSPWGVILWRKGSEPLQGSSRISILDNGSLRIWNVTKLDAGLY
TCVARNQFGVASSTGSVTVKEPTIITTQPTTLDITVGESVVLPCQVSHDPSLELKFTWFF
NEQLIHFGNNGGFFEKVGGQHSAGDIMIRNIQLGHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIQVEEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGH
QLTATVIALSPWVEYEFRVLASNRVGTGEPSKPSKQARTKSTTPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVVAFRPRGATGWMQAAVPSPEASRYVFKNESIQPFSPFHV
RVGVYNNEGEGPFGSVTTIYSAEEEPGRAPTRIRLKSLSASEIEVSWKALPWNASKRRVL
GYELRYWSRSEREETASILRTTGNQTSTVISGLRGSTVYYISVRAYNTAGTGPSSTTVNV
TTKKPPPSQPPVKVMWNTSNSKIILNWEHVKALENESEVTGYKVLYKKNRHSRPNVMETN
TTSVELALPTDEEYIIQIKPFGEGGDGNSSKQITIPRIAGPNAVGSASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactactgctgctgcagtcacttatggggtgcctggcagagcgc
agcgtcctgcagagtcctgctttcaccaaacagccaggcagcattgtgtatcctgtggag
acggtggggaacaacagagaggtggtattcagctgcgaggcccagggtaccccacctccc
acataccggtggaaattaaacggtacagaagtcattcccaaagccgggtctcactacagc
ctttctggaggcaacctcagaatcagccgtctgaacaaagaccaagatgccggaacgtat
cagtgcctagcctccaactccttcgggaccatcgtcagccgagaggccagtctaaccttt
gcatacttggagaacttcaagactcacaaaagaagctctgtctcagtacgtgaaggtcaa
ggagtggttttgctgtgtggccctcctccacattcaggagatctgatcttttcttggatc
ttcaatgagtacccaaatttcgtaaagcaggacactcgccgcttcatctcccaggaaaca
gggaatctgtacattgccaaagtggagccttcagatgttggaaattacacctgtgtggtg
accaacacagtcacaaagactcgtgttcagggtcctcccactcctcttgtgcttcgcagt
gatggtgttatgggtgaatatgagccaaagattgaagttcaatttccagaggttatccac
gtagccaaaggatccactgtaaagctggagtgctttgcacttggaaaccctgcacccacc
attggttggaagagggtggataatgtacccttccccaggaaagtggacatgaggaaggcc
agcggtgtcctagaaatcccatatttccaacaggaggatgccggcacatatgaatgtgtg
gctgaaaactccagggggatgaacacagtgaaagggaagctctctttctacgctccacct
catctcattgagaagccccaagatgtgcaaaagctcatcgatgactcactggtgtgggag
tgcaaagccacagggaaaccaaaaccctcgtacagatggatgaagaatggagaaaacctg
gagtctgcagaggagcgcatacaggttgccaatgggattctgtcaatcagtcggctaacc
ctgtctgacaccggaatgtaccagtgtgtggcagggaacaagcatggcgaggtctattcc
aacgcagagctccgagtcatagctgttgccccagatttctctcacaatcaactgaagagt
cagacactggtgaaagtaggaggagatatcctgatcgagtgcaagcccaagatgtctcct
tggggtgtcatcttgtggcggaagggcagcgaacccctacagggaagcagcaggatctcc
attctggacaatggcagccttcggatttggaatgtgacgaaattggacgctggtctctac
acctgtgttgcaagaaaccagtttggagtagcaagcagcacaggaagcgttacagttaaa
gagccaaccatcatcactacacagcccacaacgctggacatcactgttggggagagtgtg
gttctgccatgtcaggtgagccacgacccgtctctggagcttaagttcacctggttcttc
aacgagcagctcatccactttgggaacaatggcggattcttcgaaaaagttggaggccag
cactcagcgggagacattatgattcggaacatccagctgggccacgcagggaagtacaca
tgcgctgtgcagaccaaggtggacagcatctccatagctgtggacctagtagttcgaggt
cccccagggccacccaccagcattcaagtagaagaaatcactgataccaccgcgtctctg
tcctggaggcctggtcctgataatcacagtccaattacggcatacaccattcaggccagg
acaccattttccctggggtggcaggctgtcaccacagttcctgaggttgtagggggccac
cagctgacagctacagtaatagcgctgagcccttgggtggagtacgagttccgggtcctg
gcaagcaacagagtcgggacgggtgagcccagcaagccgtccaaacaagctaggacgaag
agcaccactccgaaggtcacaccggctaatgtgagtggaggaggaggcagtcgctccgaa
ttagtcatcacatgggagcccgttccagaggagctgcagaatggaccagggttcggctat
gtggtggctttccgacctcgaggcgccacgggctggatgcaggcagccgtgccgtcccca
gaggcatccagatatgtttttaaaaacgagagcatccaacctttctcgcctttccacgtg
agggtcggggtttacaacaacgagggcgaggggccatttggctcggttaccactatctac
tcagccgaggaagagcctggccgagctcccaccaggattcgtctcaagagcctctctgca
tctgagatcgaggtgtcatggaaagccctgccctggaacgccagcaagcggagggtgctg
ggctacgagctgaggtactggagtagaagtgagagggaggagacggccagcatactgagg
accacagggaatcagacatccaccgtcatcagtgggttgagaggcagcaccgtctattat
atctcagtgagggcctacaacacagctggaacaggcccttcaagcaccacagtcaatgtg
accaccaaaaaaccacctcccagccagcctccggttaaagtcatgtggaacacatcaaac
tccaagattatcctgaactgggagcacgtcaaagctctggagaacgagtcagaagtgacc
ggttacaaagtgctatacaagaagaatcgacacagccgacctaatgtcatggaaactaac
accacctcagtggagcttgctcttccgactgatgaggaatatatcatccaaataaagcca
tttggagagggaggagacgggaacagcagcaagcagatcaccatccctaggatagcagga
cccaatgcagtcggctcagcctccaaggtctccacgctgtcagccctcagcacaatagct
ctctctttcacagcacggacatctttatga
DBGET
integrated database retrieval system
