Cyprinodon variegatus (sheepshead minnow): 107093198
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Entry
107093198 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: AP-3 complex subunit beta-2-like
KO
K12397
AP-3 complex subunit beta
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107093198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107093198
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Others
AP-3 complex
107093198
Endosome - Golgi transport
107093198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
INTS1_R4
7TMR-HDED
MOR2-PAG1_C
Tautomerase
Motif
Other DBs
NCBI-GeneID:
107093198
NCBI-ProteinID:
XP_015243567
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSSSSAFSEEKGGSSSVGEPEYGHDPASGGIFSSDYKRHDDLKEMLDSNKDSLKLEAMKR
IVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLK
DPNQLIRASALRVLSSIRVTIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDPEQK
DQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVII
NMLTRYARTQFLNPNVNETLLEEGGGGEKTFYGSDEDEDEEDEEKQGGIRRCLEGEEKKA
EAAAMAKRKPYVMDPDHRLLLRNTKPLLQSRNAAVVMAVAQLYFHLAPKAEVGVIAKALV
RLLRSHSEVQYVVLQNVATMTIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANET
NISTILREFQTYIKSMDKDFVAATIQAIGRCATNIGEVRDTCLNGLVQLLSNRDELVVAE
SVVVIKKLLQMQPEKHSDIIKHMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRK
MAKSFTNEEDIVKLQILNLAAKLYLTNSKQTKLLTQYVLNLAKYDQNYDIRDRARFIRQL
IVPIEKSGALSKYAKKLFLALKPAPVLESPFKDRDHFQLGSLSHLLNAKAGGYQELPDWP
ESAPDPSVRNVETEEVITTGEGRIGLLGDWREVPCLRVQWF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccagctctgcttttagtgaagagaaggggggctcctccagcgtcggggagcct
gaatatggtcacgacccagcgagcggcgggatcttctcctcggactataagcggcatgat
gacttgaaggagatgctggacagcaacaaagactccctgaagctggaggcgatgaagcgg
attgtggctatgattgcccggggcaaaaacgcatcagaccttttccccgccgtggtaaaa
aacgtggcgtgtaaaaacattgaggtgaagaagctggtctatgtttacttggtgcgttat
gcagaagagcagcaggatcttgcccttctctcaatttctacgttccagcgtggattaaag
gatcccaatcagctgatcagagccagcgccctgcgtgtcctgtccagcatacgagttacc
attattgtccccataatgatgctggccatcaaagaagctgcttcagatatgtctccctat
gtcaggaagactgctgcccatgctatccccaaactctacagtttggatcctgagcaaaaa
gatcagcttatagaagtgatagagaaactcctggcagacaaaactactctggtggctgga
agcgtggtgatggcctttgaggaggtttgcccggagcgcatcgatctgatccacaaaaac
tacaggaagctgtgcaacctgctgatcgacgtggaggagtgggggcaggtcgtcatcatc
aatatgttgacccgctacgcaaggacccagtttctcaacccaaacgtcaatgagactctg
ctagaggagggaggcggtggggagaagaccttctatggttcagacgaagacgaggatgag
gaagatgaggagaagcagggaggaattaggaggtgtttagagggagaggagaagaaagca
gaggccgcagcaatggccaagaggaagccgtacgtcatggaccccgaccaccggctactg
ctgaggaacaccaagcctctactgcagagccgcaacgccgctgtggtgatggccgtggct
cagttgtatttccatctggccccgaaagcagaagtgggtgtgattgccaaagcattggtc
cgtctgcttaggagccacagtgaagtccagtacgtagttcttcagaatgtggcaaccatg
accattaaaaggcggggcatgtttgaaccatacctgaagagcttctacatccgctccaca
gacccaactcagataaaaatcctaaagctggaggtccttacaaatctggccaatgagaca
aacatttccaccatcctcagggaatttcagacttacattaaaagtatggacaaagatttc
gtggctgcaacaattcaggctatcggtcgctgtgccaccaacatcggagaagtcagagac
acgtgtttgaacggtctggtgcagctgctgtccaatcgagatgagctggtggtagccgag
tcagtggttgtcatcaagaagctgctacagatgcagccagaaaagcacagcgacatcatc
aagcacatggccaaactcaccgacaacatccaggttccgatggcccgagccagtatcctg
tggctgattggagaatactgtgagcacgtgccaaagatcgctccagatgtcttgaggaag
atggccaagtcgtttaccaatgaagaggacattgtgaagctacagatcctaaatctggct
gcaaagctctatctcaccaactctaaacagactaaattgttgacgcagtacgttctcaac
ttggccaagtacgaccagaactatgacatccgtgatcgggcgcggttcattcggcagctc
atagtgcccattgagaagagcggagctctcagcaagtatgccaagaagcttttcctggct
ctgaaacctgcacctgtgcttgagtctccatttaaagatagagaccacttccagttgggt
tccctttcccacctgctgaatgccaaagctgggggctaccaggagctgcctgactggccc
gaatccgcccccgacccctccgtgcgcaacgtggagacagaagaagtcataaccaccgga
gagggacggatcggcctcctgggggattggcgagaggtgccctgtttgagagtgcagtgg
ttttag
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