Cyprinodon variegatus (sheepshead minnow): 107093260
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Entry
107093260 CDS
T06110
Name
(RefSeq) FERM and PDZ domain-containing protein 1-like
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107093260
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Other domain-containing proteins
FERM domain-containing proteins
107093260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
FERM_C_FAK1
RA_3
FERM_f0
PDZ_2
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-GeneID:
107093260
NCBI-ProteinID:
XP_015243710
LinkDB
All DBs
Position
Unknown
AA seq
2068 aa
AA seq
DB search
MESQDRSRSPSRRTSRVEQVVGRWLRRSRDLGSRSLSLSRDRVAVDGKTGESSGSDQRNY
PFRFNIQIQKDLDLNSHGLTLSTQIPILVEEVMPGGPADGRLVPGDQLVKINDIAVDDLT
PEQAAEIIRECQDTLTMTVLRIIKGPKSSFITPEKRAKLRSNPVKVHFAEEVEVNGQSQG
NSLLFLPNVLKVYLENGQTKAFKFEISTTVKDIVMTLKEKLSLNRIEHFSLVLEQQHNSS
RLLLLHDEERIHQVVQKKEVHNYRCLFRVCFLPKDFKALLQEDPAAFEYLYLQGVNDVLQ
ERYAVEMRCNAALRLAALHIQERLVSSGQSPKANLKMITKTWGIENFVSSTLLRNMREKD
LRKAISFHLKKTQSHQDPRQKALSVEQARINYLEELSDLKSFGGKSFGATLMLQDRESMV
SLLVGARYGVSQVVNHKLSIMTTLTEFNSITRVELLPESDKVSLVKIYLQDIKPITLLLE
ASAAKDMSCLIAGYCRVFIDPNLNVFPWMDDKKHRVSAEEGYVSRCGSDSEDSSDLDMEP
LYSLASQDDQTSPRVRSSSDPDGRKRKDRDLMRSKDNESKGEMPVESKKLKQENSPDTAK
ETSSLENNGGREKQDMVEVQRHDSKIQIQITDSSEGQKINPGTGEEEQPTVSEASDSCHT
DSRVLSSPSSDSLDALEEDDLISCSSSSVQTHARSQAHVCTHSPIQLHFHSDGRIQPHLL
APPPLHSHPLIHLTVVNCGREPEEGEGSSRSGDGADPKLISTLSQSPKVQKHSSELCSAD
SSLCFAELSRLVDLLPSPPEASEDDDAEEDDLQRKAKLQCGISGTLRTDDRRGVQGHPLS
TSPSSPSSHKDFFFNFDQSDARCYYNLCSNITPDSAHNLPGPQHPNSGGSHKTEVKTADP
EPVPILQPPPGFGDSSSDDEFFDARDRFTSPEDPTSGAVPRGIQMNKKLDSNSCVSLSDI
RVSVMDINKDKGAEMDKQKEEEERGSKETMFLLRKRSRKRRSFMETDYTSQVTYPESDLD
SESNLNSCRLQKNILTDSSDNTILTSDPEPSEQTQNPSLTVSSLTHAEGEPAQLESKPIL
SKLHSHGPGFLSASEQTRNLKPPSRTRKQEMEMEPDAMESKSVTDLVKVVPPTITVVRCR
VDPDGKESADRRGDGKEEGEDQEEMSGRKGESKEEKPACLTGNGPFTTHMFLPDIIEEEE
KDDVKKEKMFQLSSSLKRPLVGAEISQDATLIPNSLTEVNKNVVTTQINTHVDKHFPTFI
TSPPPPPPSRLLPQTPTGLKLDCETLVKEAELHKTIETSIKLSALNLKEEISCHSDTAQS
IKQTLVSINDEELIGIQESTESSNSDNVFEDEDDAHTSFSPNCTSDEHQYDRTVSANSSL
TQGTTDKLHIDAQLHLNCEEQIRGLNADHILAIKSIRAKLEATTNIISSLNSGTELKNMG
ISKPKSDSSLVGGATADSSGSPSIVIPKAATLSDLSKDLTPPARFLFQTYSPSIMGRLSA
STLRGKIQNLPLYLSRSQESLTQAGVESSAQSPAKEACRNEAYPLDGFHDITQTFDLEMG
LAPDSAESDDSDATLTGSELDGEFFLETASAQRSPLTPEKKEVSFELPVQTEPKQHHQTL
YAGPNDNTPGPVTEPPTSIIHFFQRDSSGLNAHMPGPIKDAPELNIRVNNLPEDIPGYKD
SSQSPIVVTTQNLNGPQLAFYGQSQKVRRTSNDRPLMGLCRPLEQISDPSKVPSTSCKVF
TICEDLSQKSPSSDLVSATPLKAEFGCSSLFASGCESVAEGVQVPLDACGCPASYTNCFS
GEESFDDELTVYEFSCRSQNSSISQTSRGGLHLITSPTAPSFISTSSTLSPSYPNPILLS
TSTSELSPLLSPPSESSNSYLSQAHKDTLRHLGQQHYPEPPEGFQVLRRDVDKLLTILEG
SNSSDRSVEGLGGRHPRDTCPAHFTENKRVLQLEARRLMSGCQKVAGTGQSPDEMLKFLA
DSFQTLVELASVCLWFSGCDRCDRRNAEAWAGLADVARSFRDFCLAAERASSKRSCQDLS
TKLLAKQCTALTASVFCLTQLFRTLTAL
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atggaatcccaggacaggagtcgctccccgtcccgtaggactagccgagtggaacaggtt
gtgggacgatggctgagacgatccagggacttgggcagcaggtctctctctctgagcagg
gatcgtgttgctgtggatgggaaaacaggggagtccagtggctccgatcagagaaattac
ccgttccgattcaatattcagattcaaaaggacctggacctcaattcccatggcctcaca
ctttccacccagatccccattctggtggaggaggtcatgccaggtggtcctgcagatggt
cgacttgtccctggtgaccagcttgtgaagatcaatgacattgctgtcgatgacctaaca
ccagagcaagctgctgaaataatcagggagtgtcaagacacactgactatgactgtcctg
aggatcataaaaggcccaaagtcatcattcatcacgcctgaaaaacgggccaagctgagg
tccaaccccgttaaggtccactttgctgaggaggttgaagtcaatggacagtctcagggg
aattctctgctcttcctgcctaacgttttaaaggtgtatctagagaatggacagaccaag
gctttcaagtttgagattagcacaaccgtcaaggacattgtgatgacgctaaaggaaaaa
ctgtccctgaaccgtattgagcacttctccctggtgcttgaacagcagcacaacagcagt
aggcttttgctgctacatgatgaagagaggatacatcaggtggtccagaagaaggaagtt
cataactacaggtgtctgttccgtgtttgttttctgcccaaagacttcaaggcactgctc
caggaagaccccgctgctttcgagtatctttacctacagggagtaaacgacgttctgcag
gagcggtatgcagttgagatgaggtgtaatgcagcattgaggctcgccgctctgcatatt
caggagaggctggtgagcagtggacagtcccccaaagccaacctgaagatgatcacgaag
acttgggggatcgaaaattttgtgtcatcgacattactgaggaacatgcgagaaaaagat
ctgaggaaggccatcagcttccacctgaagaaaacccaatcccatcaggatcccaggcaa
aaggccctgtcagtagaacaagcaaggatcaactatctggaggagctgagtgatctcaaa
tccttcggggggaagtcgttcggtgctactttgatgcttcaggatagggaatcgatggtg
agcctccttgttggagcgcgctatggggtgagtcaggtggtcaaccacaagctgagtatc
atgacgactctaacagagtttaacagcatcactcgcgtcgagctgctgcccgaatcagac
aaagtcagcctcgtcaaaatatacctacaggacataaagcccatcacattactgttggaa
gcaagtgcagcaaaggatatgtcctgcctcatagcagggtactgccgcgtgtttattgac
cccaacctcaatgtcttcccttggatggatgacaagaaacacagagtttctgcagaagaa
ggttacgtgtcacgatgtggaagtgactcggaggactcttctgacttggatatggagcca
ttgtacagcctggcatctcaagatgaccaaacctctcctcgtgttagatcctcgtcagac
cctgacggaaggaaaaggaaggacagggacctgatgagaagcaaagacaacgaatctaag
ggagagatgcctgtggagagcaaaaaacttaaacaagagaattctcctgatactgcaaag
gaaacatcttcactagaaaacaatggagggagagaaaaacaagacatggtggaagtacag
agacatgattcaaaaatacagatccaaataacagacagttcagagggacagaaaataaac
cctgggactggggaagaagagcagccgactgtgtcagaggcatcagattcatgccatact
gactcccgtgtcctcagcagtccctccagtgactctctcgatgccctggaggaggatgat
ttaatttcctgttcctcctcctctgtgcagactcatgctcggtcacaggctcatgtttgt
acccactcccctattcagcttcacttccactctgacggccgcattcagcctcacctcctt
gctcctccgccacttcactctcacccccttattcacctaactgtggttaactgtgggagg
gagccagaagaaggagaaggcagcagcagatcaggtgatggtgctgatcctaagcttatc
tccaccctatctcagagccccaaagttcaaaaacattcaagtgaactctgctcagcggat
agctccctgtgctttgctgagctctcccgccttgtagacctcctgccgagccctcctgag
gctagcgaggatgatgatgctgaagaagatgatctgcagcgaaaggctaagttacagtgc
ggtataagtgggactctaagaacggatgacagaagaggtgttcaggggcatcctctttct
acttctccgtcatccccatcttcccacaaagactttttttttaactttgaccaaagcgat
gctcgctgctactacaatctctgctccaacatcactcctgacagcgctcacaaccttcca
ggccctcagcatcctaacagtggagggtcgcataagactgaggtgaagactgcagaccct
gagccagttcccatcctccagccgccacctggatttggggacagcagctctgatgatgag
ttctttgatgcaagagatcgcttcacctcacctgaagatccaacgtcaggggccgtccca
agaggaattcagatgaataagaagcttgactccaacagctgtgtcagtctgagtgatatc
agagtctctgtgatggacataaataaagataaaggggcagaaatggacaagcagaaagaa
gaagaggaaagagggagcaaagaaacaatgttcctcctccggaaaaggtccagaaagcga
cgctctttcatggagactgattatacctctcaagtgacatatccagagtctgatctggat
tcagaatccaatttaaactcttgtaggcttcagaaaaacatattgactgattcaagtgat
aatacaatactgacttcagatccagaaccctcagagcaaacccaaaatccaagccttacc
gtctcctctctcacgcatgctgaaggagagccagctcagctcgagtccaaacccatccta
tcaaagctccactcacatggaccgggctttctttctgcttctgaacagaccagaaattta
aagcctccttccagaacaaggaaacaggaaatggagatggaaccagatgcgatggaatcc
aaatcagtcactgatcttgtgaaggtggtgcctcctaccatcactgttgtccgctgtcgg
gtcgatccagacggaaaggagagtgcagatcggagaggagatgggaaggaggaaggggaa
gatcaggaggagatgagtggaaggaagggggaatcgaaggaggagaagccagcttgtttg
acaggaaatggaccattcactactcatatgtttttacctgatataattgaggaggaagaa
aaagatgacgtgaagaaagagaaaatgtttcagttatcatccagtttaaagagacccctt
gtgggcgctgaaatatcacaggacgctaccttaattcctaatagtttaacagaagtaaat
aaaaacgtggtcactacccagataaacacacatgtggataagcatttccctacgtttatt
acatcgccaccacctcccccaccatcacggcttctccctcaaactcccactggactcaaa
ctggattgtgagactctggtcaaagaagcagaactccacaaaaccattgaaacctcaatc
aaactatctgctttaaatttaaaagaagaaattagttgccacagtgacactgcacagtcc
ataaaacagaccttggtgagcataaatgatgaggaactcattggtattcaggaatctaca
gaaagctctaattcagacaatgtttttgaggatgaagatgatgcacacactagtttttca
ccaaattgcacttcagacgagcatcaatacgacaggactgtaagtgcaaatagtagctta
acgcagggaactacagacaaattacacattgatgcacagcttcatttaaattgtgaagag
caaattaggggacttaatgcagatcacattctagctataaagtctattagagctaaactt
gaagctacaaccaacatcatatcttctcttaactcaggaaccgagctgaaaaacatgggc
atatcaaaaccaaaaagtgattcctccttggtcggtggcgccactgcagacagttcagga
agtcccagcattgtgatcccaaaagctgccactctgagcgatctatccaaagacttaaca
cctccagctcgttttctcttccagacttattcaccaagtatcatgggccgtttatcagcc
tcaacactaagggggaagattcaaaacttgcctctttatttgtcacgttcccaagaaagt
ctgactcaagcaggagttgagagttctgcacagagtccagcaaaggaagcttgcaggaat
gaggcatatcccctcgacggcttccatgatatcacacaaacatttgacttggagatgggc
ttggcacctgattcagccgaatcagatgattccgatgcaactttgactggatctgaattg
gatggggagttttttttggaaacagcctcagcacagagatctcccttgacacctgagaaa
aaagaagtcagttttgagctgcctgtgcagacggagcccaagcagcatcatcaaacccta
tatgccggacctaatgacaatacaccaggaccggtgacagagcctcctacatccatcata
catttttttcaaagagatagctctgggttgaatgcacatatgccaggacccattaaagat
gccccagagttaaatataagggtcaacaatctacctgaagacattccagggtataaagac
agcagccagtctccgattgtggtgacaacccagaatctgaatggtccacaacttgctttt
tatggtcagtcccaaaaagtcagaaggacaagtaatgacagacctttgatgggtctttgc
agacctttagagcaaatttcagacccatcaaaagttccttctactagttgtaaagtgttc
accatctgtgaggatctgtctcagaaaagtccttcatctgacctggtttctgctacaccc
ctaaaggctgaatttggttgcagctctttgtttgcatcagggtgtgagtctgtagcagag
ggtgttcaggttcccctggacgcctgtggctgtccagcatcatatacaaactgcttcagt
ggggaagagagctttgatgatgagcttacagtctatgagttctcctgtcgctctcaaaac
agcagcatttctcagacctccaggggaggtcttcatctcattacatctccaactgctccc
tccttcatctccacctcctccaccctgtccccatcatatcctaaccccatccttttatcc
acttctacctctgaactcagccctcttctctcacccccctcagaatcctccaactcatat
ttgtctcaagcgcacaaggacactctccgtcatctgggtcagcagcactatccagaaccc
cctgaaggtttccaagttcttcgcagagatgtagataaactcctgacaattttggaaggt
agcaacagctctgaccgatctgtggaagggctggggggtcgccacccaagggacacatgc
cctgcacatttcacagagaacaagagggtactgcagttggaggccagacgcctgatgtct
ggttgccagaaagtggcaggcactggccagagcccagacgaaatgctcaagttcctggct
gacagtttccagacattggtagagcttgccagcgtgtgcctctggttctctggttgcgat
aggtgcgatcgaaggaatgcagaggcatgggcagggctggctgatgttgcccgctcattc
agggacttctgcttggcggcagagcgagccagcagcaaacgtagttgccaggacctgagc
accaagctgttggcaaaacagtgcacagcacttaccgcctcagtcttctgtctcacgcag
ctgttccgcaccctcactgcactatga
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integrated database retrieval system
