Cyprinodon variegatus (sheepshead minnow): 107093370
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Entry
107093370 CDS
T06110
Symbol
arhgef28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107093370 (arhgef28)
Membrane trafficking [BR:
cvg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107093370 (arhgef28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PHD
SOS1_NGEF_PH
Prok-RING_1
C1_2
PH_13
PHD_2
Motif
Other DBs
NCBI-GeneID:
107093370
NCBI-ProteinID:
XP_015243873
Ensembl:
ENSCVAG00000001016
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MSHLIFNFFFPSGTGDTKELNVDGNALLDNVFEDQPTLFLIDTDSEEETSSSLSVNVHLK
QSTEVQNQFSQRASDPSLSMINGNDQTFAQHTQACEEDIKFRVDDVTSDSTNTDGSLWDP
EDLLLATDTPPPHSHLRELPASLPSSLSLSPVDQALTRLIRRPSTEPNSHRDSPTMETCD
ISLVALEVDSEEEPPEPKSLLSRLFSDVGKSEEKKETRRPNPDLTCTRSQSASACEPNSK
DLSEEGVRLRSYSYSHSKFCPSRSNRDNHTSEGSPDGVLHSVSHSRSLLQALSLSKSTLS
LSLLHPGKQRTSSISEPSHDKREVRFRKRAQSADDEGSVELAESLHHLTLSEFLKEIEEE
ELEKCNIPNKAESEKYKVIRTFSFLKNRMSSTRNKSKVNKGKGKDREAKDRQLNGHRFGA
GPCLGPTVCVVCDKPASGKDLLHCSGCTAIVHKSCKESVPPCLKKLQDRHATTGIKSKTA
SLPQNFIVRESPPHSVIPISVSQPVLTPKERKDTVTHSGSLPGSLPNSDSLLSESSETES
EALKPNSLSEELLPTPGSSASNESSFGEDCVDSYIHTYSDILADSADYEAESWSLTVEHK
FCKRQDKRAVKRQDVIYELMQTELHHLQTLHIMAEVFRRGMKEEVQLDTESVERVFPCLD
QLLVLHHAFFTAMKERRQTSGQPQGHRNYLIQQIGDILLHQFSEENGEKMKQVYGEFCSH
HNEAVSFFKDLLLHNKRFQSFVKQQGHNSLVRRREIPECILLVTQRITKYPVLLERILHY
TQEETDEHGNISKALAHIREVIAAVDSRVSEYERHQRLQEVCNRMENRSTAKLKSGRTFR
KQDMMGPGQTLRYQGVLLWKTATGRLKDVLALLLTDSLIFLQEKDQKYAFAAVDQKPPVI
ALQKLIVREVANEEKGMFLISASSAGPEMYEVHTSSKEERNTWMRLIREAVESCPEETEG
SASESEEEKRAAEVRFQKILKLQESLTSQDQQICSSLEEKLQIYTELSALSGRMEAVSAE
PRLLVQMQSEELPQAAGLLAAALQEAENLKAALSSKARSLSSHSQDSDSMFPVSPDALAD
PTFEENGGSLTDAFESQSAADLQKRDGSCIDFKAAESVQTLTQLLYSLQAAVTIQDTCYE
VQRLLLQASEHTSPRSHCLPLHGLRSNTLQEQEKQRNLEKRKEEVAAAQRLRERLRQEKE
RWERECQARESQQVEQESKLEEREKKCQLAAEKLRRERQELEEQLEEYQQSLERLREGQR
SVERERERLEDQHKLLQAWKHGRQSSLPAVIPHMVIPLDVQQASPPYNSRRHAGNGSVFV
NEAAYAGDSFNNRHVHHKRNDPNAHNSFNSLLDRSNRQYPVVSNPLGSGYIYSPIGRLQH
STSDHSYNGETWMSTADLNPQLTHPSEHQLELNTLVSLETDSDQEDGREETIVFL
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcttatatttaattttttttttccatctggcacaggggacaccaaggagctt
aatgtagacgggaatgcactgttggacaatgtttttgaagatcagccgactttgttttta
attgacactgatagtgaagaagaaacctcatcctcactgtccgtaaacgtgcacctgaag
cagagcactgaagttcagaaccagttcagccagcgtgcttcagacccgtcactctccatg
atcaatggcaatgatcagacctttgcacagcacactcaggcttgtgaagaggacattaag
ttcagagtagatgatgtgacaagtgacagcaccaacactgatggcagtttatgggaccct
gaggatcttctccttgcaactgacacccctccaccccattctcacttaagagagctccct
gcctctctgcctagctccctctctctctcaccagttgatcaggccctcaccaggctgatc
cgtcggccctccactgagccgaacagtcacagagacagtccaacaatggaaacctgcgac
atcagtctggtggccctggaagtggacagtgaggaagaacctcctgagcctaagtctctg
ctttcccgcctattttcagacgttggcaaaagcgaagaaaagaaagaaacccggcgtccc
aatcctgatctcacctgcactcgtagccagtcggcttcagcatgcgaacccaactccaaa
gacttaagcgaggaaggtgttcgactgcgctcctattcctactcgcactccaagttctgt
cctagtcgcagcaaccgggacaaccacacatcggaaggtagccctgatggcgttctccac
agtgtcagccacagccgatctcttcttcaggcgctctctctgtctaaatccaccctgtct
ctgtctctgctacacccgggtaagcagagaacctccagcatatctgagccgtcccatgac
aaaagagaggttaggttccgtaaacgggcccagtctgctgatgatgagggcagcgttgag
ctggcagagtccctgcaccatctcaccctgtctgagtttctcaaagagattgaagaagag
gagttggaaaagtgcaatattccaaacaaggcagaatccgagaagtataaagtcattcgt
accttcagcttccttaagaacaggatgtccagcacacgtaacaagagcaaggtcaacaag
ggaaaagggaaggacagagaagccaaggatagacaactaaatgggcatcggtttggagcg
ggcccatgtttagggcccacagtgtgtgtggtttgtgacaaaccagcttctggaaaggat
cttctgcactgctcaggttgcactgctatcgtccacaagagctgtaaggaatctgtccca
ccatgcttgaagaaacttcaggataggcatgccacgactggaataaaaagcaagacagcc
tccctgccacagaacttcatagtgagagagagccccccccattctgtgatccccatttct
gtttcccaacctgtccttaccccgaaggagaggaaagacactgtaacccattcaggctct
ctgcctggaagtttaccaaacagtgacagtctgctcagcgagagttcagagacagaatct
gaagccctaaagccaaacagcctttcagaggagctcctgccaactccaggctcctctgcc
tccaatgagtcatccttcggagaagactgtgtggactcatatattcacacatacagtgac
atattagctgattctgctgattatgaagctgagtcatggagtctgacggtagaacacaag
ttctgcaagaggcaagacaaacgagctgtcaagaggcaggatgtaatctatgagctgatg
cagactgagctccaccacctgcagacgctgcacatcatggctgaggttttccggcgtggt
atgaaggaagaagtacagctcgacacggaatctgtggagcgagtgtttccctgcctggac
cagctgcttgttctccaccacgctttcttcactgccatgaaggagcggcgtcagacctct
gggcagccccagggtcataggaactacctgatacagcaaattggagacatcttgcttcat
cagttttcagaagagaatggagaaaaaatgaagcaggtttacggagagttctgcagtcat
cacaatgaagcagtcagttttttcaaagatctcttgcttcataacaagagatttcaaagt
tttgttaagcaacaaggtcataactctttggtgcgccggagagagatccctgagtgcatt
ttactggtaacccaaagaatcacaaagtacccagtcctgctggagaggatactacattat
actcaagaggaaacagatgagcatggtaacatttccaaagctctggcgcacatccgagaa
gtgatagcagctgtagactcaagagtcagcgaatatgagcgccaccagagattgcaggaa
gtgtgtaaccgcatggagaaccgcagcaccgccaagctgaagagtggacgcacgttccgt
aagcaggacatgatggggccgggtcaaaccctcagataccagggtgtgctactgtggaag
accgccactggccgacttaaggatgtcctggcactgctcctcaccgacagcctcatcttc
cttcaggaaaaagaccagaaatatgcatttgctgctgtggaccagaagcctcctgtgatt
gcactgcagaaattaatagttcgggaagttgcaaatgaagaaaaagggatgtttttgatc
agtgcctcttccgccggcccggaaatgtacgaggtccacacttcatccaaagaggaacga
aacacctggatgaggcttattagagaggctgtagaaagctgtccagaggagactgaggga
tctgcaagcgaatctgaagaggagaaacgagctgctgaggttcgtttccagaagatcctc
aaacttcaagagagtttgacgagtcaggatcagcagatctgctccagcctggaggagaag
ctgcaaatctacacggaactgtctgctctgagcgggagaatggaggccgtttcagcagaa
ccgcgtctgctggtccagatgcaatcagaggagctgccgcaggcggctggactgctggct
gctgccctacaagaagctgagaacctcaaagctgcactgtcatccaaggcccgttctctg
tcaagtcacagccaggactcggactccatgttccctgtcagtcccgacgctctcgccgat
cccacattcgaggaaaacgggggaagcctgactgatgcttttgagtctcagtctgcagct
gacttacaaaaaagagatgggagctgtattgattttaaggctgcagagagtgtccaaacc
ctgactcagctgctctacagtttacaggctgccgtaaccattcaggacacttgctatgag
gtccagagacttctactccaagcgagtgagcacacctcgccccgcagccactgcttgccc
ctccacggccttcgcagcaacaccctgcaggagcaggagaagcagcgcaacctggagaaa
cgcaaggaagaagtggcggcagcccagcggctccgggaacggctgcgccaggaaaaggag
cgctgggagcgagagtgccaggcaagagagagccagcaggtggagcaagagagcaagctg
gaggaaagggagaaaaagtgccagctggctgcagagaaactgaggcgggaaagacaggag
ctggaggaacaacttgaggagtaccagcagagcctggagcggctcagagagggtcagagg
agcgtggaaagggagcgggagcgtctggaggatcagcacaagctgctccaggcctggaag
cacggtcggcagagcagcctgcccgctgttatacctcacatggtcatccctctagatgtg
cagcaggcctctccgccatataactccagacggcacgccggtaacggctccgtgtttgtg
aacgaggcggcgtacgctggtgacagctttaacaaccgccatgtccaccacaaacggaat
gacccgaacgcacacaatagtttcaacagcctgctggacagatctaacagacagtaccct
gttgtatccaaccctcttggatcaggatacatctacagtcccataggaaggctacagcac
tcgaccagcgatcatagctataatggggagacctggatgtcgacggctgacctcaatcca
cagctcacacatcccagtgagcatcagctggagctgaacacgctggtttccttggagaca
gacagcgatcaggaggacggacgggaggaaacaattgtgttcctctga
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