Cyprinodon variegatus (sheepshead minnow): 107093391
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Entry
107093391 CDS
T06110
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00310
Lysine degradation
cvg00514
Other types of O-glycan biosynthesis
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107093391
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
107093391
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107093391
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
107093391
Glycosyltransferases [BR:
cvg01003
]
O-Glycan biosynthesis
O-linked Gal type
107093391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
IF4E
Motif
Other DBs
NCBI-GeneID:
107093391
NCBI-ProteinID:
XP_015243910
Ensembl:
ENSCVAG00000023369
UniProt:
A0A3Q2FBU5
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MKGVAFLAVVLLLLLTSCSSVRGYFAEERWSPESPLLAPRVLLALICRNSEHSLPYFLGT
IERLRYPKDRMALWVATDHNEDNTTTILREWLLKVQSFYHYVEWRPKEEPSHYKDEDGPK
HWTDLRYEHIMKLRQGALESAREMWADYLMFVDCDNLLTDRDVLWKLMKENKTIIAPMLE
SRGAYSNFWCGMTSEGYYRRTPAYIPIRKQVRKGCFAVPMVHSTFIIDLRKEASRQLAFH
PPHPEYSWAFDDIIVFAYSAQMADVQMFVCNKETYGYLPVPLRAHNTLQDEADSFLHSLL
EVNVRNPPLMPSKYIPVPRKKADKMGFDEVFMINLQRRTDRRERMLRTLYEQQIACKVIA
AVDGKAMNISEIHALGIHMLPGYQDPYHGRPLTKGELGCFLSHYNVWKEIVDRHLETSLV
IEDDLRFEVFFKRRLMNLMSEVEQEGLDWDLIYIGRKRMQVDHKEKAVPNIHNIVEADYS
YWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMFNKHPVSDYMEQFENRDLKAFSAEP
LLVYPTHYTGDPGYISDTETSTVWDNEKVRTDWDREARSGKTQEQTEISREAQNTDVLQS
PLDSTARDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggggttgccttcctcgccgtggtgctcctcctgctcctcacctcctgctcctct
gttcgggggtactttgctgaggagcgctggagccccgagtctccgctcctggcccctcgg
gttcttcttgcgctcatctgcagaaactctgagcactctttgccctattttttaggaact
atagagcgacttcggtatcccaaggaccgtatggctctctgggtagcaacagatcacaat
gaggacaataccacaacaattctgcgtgagtggcttttaaaggtgcagagcttttaccat
tatgtagagtggaggccaaaagaagaacccagtcattacaaggatgaagatggtccaaaa
cactggacagacctccgttatgagcatattatgaagctccggcaaggagcattggagtcc
gctcgtgagatgtgggcagactacttgatgtttgtggattgtgataaccttcttaccgat
cgagatgtactctggaagctgatgaaagaaaacaagacaataatagccccgatgcttgaa
tcccgtggcgcctattcaaacttttggtgtggaatgacctcagagggttactatagacgg
acccctgcctacatacctatcaggaagcaagtccgtaaaggttgttttgcagttccaatg
gttcattccacattcatcatagacctcaggaaagaggcatccaggcagctagcctttcat
ccaccacatccagaatacagctgggcatttgatgacatcattgtgtttgcgtattctgct
cagatggcagatgttcaaatgtttgtatgtaataaggagacctatggttaccttcctgta
cctttacgcgcccacaatactttgcaagatgaagctgatagttttttacactcactattg
gaagttaatgtgcggaatcctcctctaatgccttccaaatatatccctgttcctagaaag
aaagctgataaaatggggtttgatgaggtattcatgataaatttgcagaggcggactgat
cgcagagaacgtatgctaaggaccctgtatgagcagcagattgcatgcaaagtcattgca
gcagtagatggaaaagcaatgaatatcagtgaaattcatgccttgggtatccatatgctc
ccagggtatcaggacccttatcatggtcgaccactgacaaagggggagctaggctgcttt
ctttcccactacaatgtctggaaagagattgtagatcgacatctagagacttctctggtg
attgaagatgacctgcggtttgaggtcttcttcaaacgtcggttgatgaacttgatgagt
gaggttgagcaagaagggctggactgggatcttatatatattgggcggaaaagaatgcaa
gtggatcacaaggagaaagcagtacccaatatacataacatagtggaagcagattattca
tactggactctaggttatatgatttcattgcagggtgctgagaagctgttaaaagcagaa
ccactaaaaaggattttgccagtagatgagttccttcctataatgttcaacaaacaccct
gtctctgattatatggagcagtttgaaaacagggacctgaaggccttttctgcagagcct
ctcctggtgtacccaactcactatactggtgacccgggctacatcagtgacactgaaacc
tccactgtctgggacaatgaaaaggtccggacagactgggacagagaagcgcgctccgga
aaaactcaggaacagactgagatcagccgtgaggcccaaaacacggatgtacttcagtcc
cctttggacagtacagctcgggacgagctttga
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