Cyprinodon variegatus (sheepshead minnow): 107093394
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Entry
107093394 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K12012
tripartite motif-containing protein 35
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107093394
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107093394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
U-box
zf-RING_2
zf-B_box
zf-C3HC4_3
zf-RING_5
zf-Nse
zf-RING_10
zf-ANAPC11
DUF4988
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107093394
NCBI-ProteinID:
XP_015243914
Ensembl:
ENSCVAG00000023383
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MALRPRASSQPGKLSLLQITKVTSSLRPRAVSSRSSSVLEDELSCPVCCEIFKEPVVLKC
SHSFCRACLQQFWNKKKARRECPICRRKCSLTEPTVSLALKNVADTFLREQERRTASASL
GPGASVAGEEAVLEEKCVTHGEVLKLFCMDDFEVLCCVCHTSKKHQGHKVCPLDEGSQDL
KTELKKDLVPLKKNLRRLYEAKQECDDTTVHIKNQTLATEKQIRQEFEELREFLEREEEA
RLAALRKEDEEKKELVKRKSDSITRDILTFSHAVIAIENEIASSDAHFLQNYTNTKKRAQ
LPQKDPEKVQGALINVAKHVSSLKYHVWAKMVKLVQYTPITLDPNTAYSWLSLSSDLTSV
ANSGSLLQLPDNPERFGHFVFVLGSEGFTSGRHAWEVEVGGKVDWMLGVVKESIDRKGKI
SGCPEGGFWMISHSEGEYSAMTRPSTPLHLERDLTRVRVQLDYEAGEVIFSNPVTMKPIY
TFTDVFTEKIYPFFCPGVNINGSNPKPLKICPAKVAVWNSATW
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcggccccgagcttcctcccagccaggaaagctttccctgcttcagattacc
aaggtaacctcgtcccttcgtccacgagctgtttcctctcgttcaagctctgtgctggag
gatgagctgtcttgtcccgtctgctgcgagatcttcaaggagccggttgttctcaaatgc
agccacagcttctgcagggcctgcctgcagcagttctggaacaagaagaaggccaggcgc
gagtgtcccatctgcaggaggaagtgctctctaacggagcccacagtcagccttgccttg
aagaatgtggctgacactttcctgagggagcaggagaggaggacggcttcagccagcctg
gggccgggggccagcgtggcaggggaggaagcagtcctggaggagaagtgtgtgacacat
ggggaggttctgaaactcttttgcatggacgactttgaagtcttgtgctgtgtgtgtcac
acttccaagaagcaccagggacataaagtttgtcccctagatgaaggatcccaggatctg
aagacagaactaaagaaggacctagtccccctgaagaagaacctgcgccgcctgtatgaa
gccaagcaggagtgtgatgacacaactgttcacatcaagaaccagactctggccacagag
aagcagataagacaagagtttgaggagcttcgagagtttctcgagcgggaggaggaggcg
agactggccgccctgaggaaggaggatgaggagaagaaggagctggtgaagaggaagtct
gacagcataaccagagacatcctcactttctctcatgccgtcatcgccattgagaatgag
attgcatccagtgatgctcatttccttcagaattacaccaacacaaagaaacgagcacag
ctcccacagaaggatccagaaaaagtgcaaggtgctcttataaatgtggccaagcatgtg
agctcgcttaaataccacgtttgggcaaagatggtgaaacttgttcagtacactcccata
accttggaccccaacactgcctactcctggctgtccctctcctcggacttgaccagcgtg
gccaacagtggatccctgctgcagctcccagacaacccagagcgctttggtcactttgtg
ttcgtgcttggatcagaaggcttcacgtcaggccgccacgcctgggaggtggaagtgggc
ggtaaggtggactggatgctcggcgtggtgaaggagtccatcgacaggaaagggaagatt
tcgggttgtccggagggaggcttctggatgatctcacactctgagggcgagtactcagcc
atgacgaggcctagcaccccgctccacctggaaagggacttgactcgtgtcagggtgcag
ctggactatgaggctggggaggtgattttctccaaccctgtgaccatgaagccaatctac
accttcactgacgttttcactgaaaagatataccctttcttctgccctggagtcaacatt
aatgggagcaaccccaaacctctcaaaatctgccccgccaaagtggctgtgtggaacagt
gcaacctggtaa
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