Cyprinodon variegatus (sheepshead minnow): 107093422
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Entry
107093422 CDS
T06110
Symbol
slc27a1
Name
(RefSeq) long-chain fatty acid transport protein 1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03320
PPAR signaling pathway
cvg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
107093422 (slc27a1)
09158 Development and regeneration
04382 Cornified envelope formation
107093422 (slc27a1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cvg01004
]
107093422 (slc27a1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107093422 (slc27a1)
Lipid biosynthesis proteins [BR:
cvg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107093422 (slc27a1)
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
107093422 (slc27a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107093422
NCBI-ProteinID:
XP_015243955
Ensembl:
ENSCVAG00000023374
UniProt:
A0A3Q2DKM0
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MHNAASVSASLGSVGLLRLVGVSWSWTLAAGLGVYLGTRSWKYFYIAARTAKRDLNGLYV
LLRVKLALWRYMRSGSNIPTIFAETVKRHPNKPALIYEATGETWTFNQLDEISNAVAHWA
RGQGWVPGDVVALFLESRPLHVALWLGLAKAGVEAALINFSLRCDPLLHCIGVSGSRAIV
FGAELADAMLEINSSLSQSMVRFCTGDLSAEHLAALGAQPLDPLLATASRHPPSPCVPPK
GMNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYFAFRMHPEDVIYDCLPLYHSAGNI
IGVGQCLIHGLTVVVKRKFSASRFWEDCIKFNCTVVQYIGEICRYLLSQPVRPSEKGHKV
RLAVGNGLRPSVWEAFTERFGVGQIGEFYGATECNCSIANMDGKVGACGFNSRILPYVYP
IRLVKVNEDTMELIRDSHGLCVPCRPGEPGLLVGRINQKDPLRRFDGYANQDATKKKIIH
NVFRKNDTAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGILNSVLNQTDVA
VYGVAVPGVEGKAGMAAIADSTGNFDCDGFLQKIQRLLPTYARPVFLRISPQIDTTGTFK
IQKTRLQREGFDPRLTTDQIFFLNGRAARYEPVDEELYNSIVEGRMSL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcagcgagtgtgtcagcctctctggggtctgtgggactgctacgtctggtt
ggggtgtcctggtcctggactctggcagcaggcctaggtgtatatctgggcaccagaagc
tggaaatacttctacattgcagcacgtactgccaaaagagacctcaatggcctgtatgtg
ctgctgagggtgaagctggctttgtggcgttacatgcgctctggaagcaatattcctacc
attttcgcagagacagtgaaacgccacccaaataaaccagctctgatctatgaagccaca
ggagaaacatggaccttcaatcagctggatgagatctctaatgcagtagctcactgggca
agaggtcaaggatgggtccctggggatgtggtggctctctttctggaaagcaggccctta
catgtggctctgtggcttggcctggccaaggctggagtggaagctgctcttattaacttc
agcctccgctgcgatcctcttctgcactgcattggggtgtcagggtcacgggctatagtg
ttcggagctgagctggctgatgccatgctggagattaattcatccctcagccagtccatg
gtacgcttttgcacaggggacctcagtgcagagcatttggcagctctgggagctcaacct
cttgatccacttctagccactgcatcaagacatccaccttcaccatgtgttcccccaaaa
ggcatgaatgaccgcctgttttatatttacacctctggaaccactggacttcccaaagct
gctattgtggtccacagtcgctactacagaatagctgcatttgggtactttgcctttcga
atgcatcctgaagatgtcatctatgactgcctgcccctgtatcactcagcaggcaacatt
attggagttggtcagtgtcttatccatggtctcacagtggtagtgaaaaggaaattctct
gccagccgcttctgggaagattgcatcaagttcaactgcactgtggttcagtatattggg
gaaatctgtcggtacctcctgtcacagccggtccgaccttctgaaaagggccacaaagtc
cgcctggcagtggggaacgggttgcgccccagcgtttgggaagccttcacggagagattt
ggggtggggcagatcggggagttttatggagctactgaatgcaactgcagcattgccaac
atggatggaaaggtcggagcctgtggatttaacagccgcattctaccctacgtttacccc
atccggctggtgaaagtcaacgaagacaccatggaactcattcgggacagccatggtctc
tgtgtgccttgccgccctggggaaccaggccttctagtaggacgaataaatcagaaggac
ccattacggcgctttgatggatatgccaaccaggatgctactaagaagaagatcattcac
aatgtcttcaggaaaaatgatacagcatatttgtcaggggatgtgctagtgatggatgag
ctgggctacatgtactttcgtgaccgcagcggggacaccttccgatggcgaggggaaaac
gtttctaccactgaggtggagggcatactcaacagtgttctgaatcaaactgacgtggct
gtgtacggcgtagcagtgccaggtgtggaaggtaaagcaggcatggctgccattgctgat
tctacagggaactttgactgcgacggtttcttgcagaagattcagagattacttcctact
tatgcccgcccagtgttcctgcgaatttccccacagatagacaccacaggtacatttaag
atccaaaagaccagactgcagagggagggatttgacccacgtctcacaacagaccagatc
ttctttttgaacggtcgagctgcccgttatgagccagtggatgaggagctttacaactcc
atagtggagggcagaatgtctctatga
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integrated database retrieval system
