Cyprinodon variegatus (sheepshead minnow): 107093566
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Entry
107093566 CDS
T06110
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107093566
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107093566
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107093566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
107093566
NCBI-ProteinID:
XP_015244191
Ensembl:
ENSCVAG00000020077
UniProt:
A0A3Q2EEX7
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MEQDVMSLSGEDCFESKSPCCSDSEALSQGDKEYDDILELNQFDGLPYSSRFYKLLKERR
ELPVWRAKGEFMLSLAKGQFVVLSGFAKTGRSSQIPQWCAEFCLSVQFQHGMVVCTQIHP
QQAVDLALRVADEMDINIGHEVGYTIPLENCCTSETFLRYCTDDMLLREMMSDPLLERYG
VVIVDQAHQRTVATDVLLGLLKEIALQRPELRVVLLSATEPSPKLLTIFTASAQPGIHLE
VPEAGEVVYSSTGDNYFCSALCLVLEIHRSKEQGDVVVFLATKQEIDLAQNILCHKKSSL
PPYLGELLPIAVHPGQSGSLPVCGEEEMGQTRRVFLTRSPNEDYFWAVSSIKFVIDAGLE
KRYVYNPRIRTNSVTIQPISSWQSECRRQLAGPTGKCFRLYPKERQLPAEIRPHIVESDI
TSTVLFLKRMEIAGLGHCDFIDRPDPGGLMQALEELDYLAALDNDGNLSEIGIIMSELPL
EPQMAKTVLASCEFDCVSEVVIIAAMLTAPSCYMVPPVELKPEAARCHMKFQHPEGDHFT
LINIFKAFKQCQQDAYCNEEKWCQDFFFNYAALLTADALRNELTDTLKRIELPISAPAFG
SRGNTVNIKRALLAGFFMQVARDVDGSGNYFILTHKHVAQICPLSGYGAKSPKLGLPEWV
LFHEHTFSEDNCLRTITHITPEEFIQMTPQYFFYNLPSSESKDILQSILNHGSSESTESK
RSSCEEPQEGQTSDRCVVQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagacgtcatgagtttgagtggagaggactgcttcgagagcaagtctccctgc
tgttcagattcagaggctttgagtcaaggagacaaagaatatgatgatatcctggaactt
aaccagtttgatggacttccttactcttccaggttttataaactgctgaaagagaggaga
gagctcccagtgtggagagcaaagggtgaatttatgctttctttggccaaaggacagttt
gtagttctaagtggctttgccaaaactggaagaagctcacaaattcctcagtggtgtgct
gaattttgcctctcagtccagttccagcatggtatggtggtatgcacccaaatccatcca
cagcaggctgtggatctcgctctgagagttgctgatgagatggacatcaacattggccat
gaggtcggatacaccatccctttggagaattgctgcaccagtgaaactttcctaaggtat
tgcacagatgatatgctgttgagagaaatgatgtcggaccccttgcttgagcgctatggt
gtggtgattgtagaccaggcccaccagaggactgtggccaccgatgtgcttctgggtctt
ctgaaggagatcgctctgcagaggccagagctccgtgtggtccttctgtcagctactgaa
ccaagccccaagctgctgaccatcttcacagcatcagctcaaccaggcatccatctggaa
gtcccagaagctggggaggtggtgtacagcagcacaggtgacaactacttctgttctgct
ctctgtctggtgttggagatccatcgctcaaaggagcaaggggatgtggttgtttttctg
gcgacaaagcaggaaatagatctggcacagaacatcctgtgtcacaagaagagtagctta
ccaccttatctgggtgagctgctgcctatagctgtgcatcctggtcagtctgggagttta
ccagtctgtggggaggaggagatgggccagacaagaagggtgttcctcacacgcagccca
aacgaagactacttctgggccgttagctcaattaaatttgttattgatgccggcttggaa
aaaagatatgtttacaaccccagaatcagaacaaattctgtgaccatccagccaatcagc
tcatggcaaagtgagtgccgcagacagctggctggtccaacaggcaagtgttttcgcctt
tacccaaaagagagacagcttcctgcagagattcgtccccatatagtggagtctgacatc
acctccactgtgctcttcctaaaaaggatggagatagctgggctcggtcactgtgacttc
attgacaggccagatcctggaggtctgatgcaggcattggaggagctggactacctagca
gctttggataacgacgggaacctgtctgagataggcatcatcatgtctgaattaccgctg
gagccccagatggccaaaactgtgttggcctcctgtgagtttgactgcgtcagcgaggtg
gtcatcattgctgccatgctaacagcaccttcttgctacatggttcctccggtggagctg
aagccagaggcggcccgatgtcacatgaagtttcagcacccagaaggagaccacttcact
ctcatcaatatattcaaggctttcaaacaatgccaacaggatgcttattgtaatgaggag
aagtggtgtcaggacttcttttttaactatgcagccctgctgacggctgatgctcttcga
aatgagctcacagacactctcaagagaatcgagctgcccatctcagcgcctgcctttggc
tccagaggcaacacagttaacatcaagagagccctgcttgcagggttcttcatgcaggtt
gctcgggatgtagatggatcaggaaactacttcattctgactcataagcatgtggcacag
atctgtcctctctctggatacggagccaagagccccaagctgggcctgccagagtgggtg
ctcttccatgagcacacattctcagaggacaactgcctccgcaccattacccacataacg
ccagaggagttcattcaaatgacaccacagtactttttctacaacttgccgtcgagtgag
agcaaagacatcctgcagagcattctgaaccacggatcatctgagagcactgaaagcaaa
cgctcatcatgcgaggaaccccaggaaggccagacgtctgatcgctgcgtcgtacagtga
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