Cyprinodon variegatus (sheepshead minnow): 107093671
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Entry
107093671 CDS
T06110
Symbol
ocln
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03272
Virion - Hepatitis viruses
cvg04382
Cornified envelope formation
cvg04514
Cell adhesion molecule (CAM) interaction
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
107093671 (ocln)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107093671 (ocln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107093671 (ocln)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107093671 (ocln)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107093671 (ocln)
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107093671 (ocln)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Motif
Other DBs
NCBI-GeneID:
107093671
NCBI-ProteinID:
XP_015244357
Ensembl:
ENSCVAG00000016656
UniProt:
A0A3Q2D646
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MPSHRHSHPLYPPSGSRSKHRHSEFMSNPAFSNYQGDKMLHFYRWTSPPGVMKILCIIII
ILCVAIFACVASTLAWDYDMGIMGGGTGMIPGIGGGSYGYGGGSSGAFGGASYSGGYGNS
YAGSGLGGSGSGYGYGYGGTQIDPKSGKGFIIAIAAITFIAMLIIFILVISRQNASRSSK
FYLASIIICAILAFLMLISTIVYLVSVNPTAQSSGSLMYNQVLQLCAQYQTQTQAQGIFI
NQYLYHYCVVEPQEAIAIVLGFLVVVGLIIVLVFAVKTRKLIQRWGEDRILWEEVKVLNP
GLRNSVGEWVTNVSGHPEVLDNDPNDRVGGSRDYLDKLEYNKPLYLPGDSDISSYVGGPK
PKMEYDAGFESGDDLEEEDFSVLFPAIMDEHERLSYKKEFDRDHVEYKGLQAELEGINQD
LADLQGDLDRHPEGSPKYLDALNEYTQLKNFKKSPDYQVKKRRCKYLKSKLSHIKTKISE
YDRRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccaagccacagacacagccaccctctgtacccgcccagtgggagcaggagcaaacac
cggcacagcgaattcatgtccaatccggccttctccaactatcagggagacaagatgctt
cacttctatcgctggacttccccaccaggtgtaatgaagatactttgcatcatcatcatc
atcctgtgtgtggccatctttgcctgtgtggcctccaccctggcttgggactacgacatg
ggcatcatgggaggtggaaccggcatgatcccgggtataggcggagggagctacggttac
ggtggcggatccagtggcgccttcggtggcgccagctacagcggtggttacggcaactcc
tacgccggttctggtctgggcggctctggctcaggctacggctatggttacggtggaaca
caaatcgatcccaagtctggcaaaggtttcatcatcgccatcgctgccattaccttcata
gccatgttgatcatatttattctggtgatctcaaggcaaaacgcctcgcgttcctcaaag
ttctacttggcctccatcatcatatgtgccattttagcctttctgatgctcatttccacc
atcgtctacctggtgtctgtgaacccaacagcacagtcctcaggatctttgatgtacaac
caggtgctccagttatgtgcacaataccagacgcaaacccaggcccagggcatcttcatc
aaccagtacctttaccattactgcgtggtggagccccaagaggccatagcgattgtcttg
ggcttcctggtggttgttggcctcatcatcgtactggtgtttgctgtcaagactcgcaaa
ctgatccagcgatggggcgaggaccggattctctgggaggaggtgaaggttctgaacccc
gggctcaggaacagtgtgggggagtgggtgacgaatgtgtcgggtcatccggaggtgttg
gataatgacccgaatgacagagtcgggggttcaagagattatctggacaaacttgagtac
aacaagccgctctacctaccaggagactccgacataagcagctacgtgggaggccccaag
cccaagatggagtatgatgctggctttgagtctggggatgatttggaggaagaggatttc
agtgttctgtttccagccattatggatgaacacgagcgtctaagctacaaaaaggagttt
gaccgggaccatgttgagtacaagggcctccaagctgagctggaaggcataaaccaggat
ctggccgacctgcaaggagacctggacagacaccccgaggggagccccaagtacctggat
gccctgaatgaatacacacaacttaaaaacttcaagaagtccccagattaccaggtgaag
aagaggaggtgtaaatatctgaaatccaaactgtcgcacatcaagaccaagatcagtgaa
tacgaccgccgcccttaa
DBGET
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