Cyprinodon variegatus (sheepshead minnow): 107093699
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Entry
107093699 CDS
T06110
Symbol
irx4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107093699 (irx4)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107093699 (irx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
107093699
NCBI-ProteinID:
XP_015244391
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MAYSQLGYSYSTTPQFLMTSSSPASHPVLRSPGHQLPSGSSIGVYGGAYPKTHSYYNTCA
SDASSLYSRGPLDPKEAAPVHLGTSQTSAYYPYEYTFGQYPYDRYGYSCSDSSSRRKNAT
RETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTWSP
RACKSSDERGCDEDSREAEKPLRSSTHIHDQRCAELQSDPEDFDMVESDASDSDPKSHAQ
PEEDEANPNTNPPHGQRSSSDCPKLTTVNPQNSSFFMNPDIRSPDPKPKIWSIAHTAVPP
EASSQPEYPPCMLSSTRSSSPVYPTNMALTSMDRQQESPVATLREWVDGVFHGPPFQQPK
PTELWKGLNESMIDSETSGQPFELIRSTSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcacagctgggatattcctactccaccacaccacagtttctgatgacctct
agttctcctgcatcgcacccagtgcttcgctcgccaggacatcagcttccttctggaagc
agcatcggggtctacggcggcgcttatccaaagacacacagctactacaacacatgcgcc
agcgatgcctcatctctctattccagggggccactagatcccaaagaagctgcacccgtg
catttggggacatctcagacctctgcctattatccttatgaatatacatttggacaatat
ccttatgacagatatgggtattcctgctctgatagctcctcccgtcgtaaaaatgccacc
agggagaccaccagcacgctgaaggcctggctgcaggagcaccagaagaacccctacccc
accaagggggagaagatcatgcttgctatcatcacaaggatgactctcacacaggtctct
acttggtttgccaatgcccgcaggagactgaaaaaagaaaacaaagtgacatggtcaccc
agagcttgtaaaagttctgatgaaagaggttgtgatgaagacagcagggaagccgagaag
ccgcttagaagtagcacacacattcatgatcaaagatgtgctgaactgcagagtgaccct
gaggacttcgacatggtggagtcagacgcgtctgatagcgaccctaagtcacatgctcaa
ccagaggaggatgaagcaaacccaaacacaaatccaccacatgggcagaggtcatcatca
gattgccccaaactaacaacagtcaaccctcaaaacagctctttcttcatgaatccagat
attcgaagtcctgaccccaagccaaaaatctggtctatcgcacacacagccgttccacca
gaagccagttcccagccagaataccctccgtgcatgctttcatcaacacggtcctcttct
cctgtgtacccaacaaacatggcactcaccagcatggacaggcaacaagagtcaccagtg
gccacactgagagagtgggtggatggggtattccatggtcctccattccagcagcccaaa
ccaactgagctgtggaaaggcctcaacgaatccatgatagacagtgaaacatctgggcaa
cccttcgaactcattcggtctacatcatgtttgtag
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