Cyprinodon variegatus (sheepshead minnow): 107093747
Help
Entry
107093747 CDS
T06110
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K27409
spectrin beta, erythrocytic
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107093747
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107093747
Intermediate filaments
Intermediate filament-binding proteins
107093747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DYH2-5-8_CC
YIEGIA_cap
Ribonuc_L-PSP
PH_11
Motif
Other DBs
NCBI-GeneID:
107093747
NCBI-ProteinID:
XP_015244480
Ensembl:
ENSCVAG00000014566
LinkDB
All DBs
Position
Unknown
AA seq
2170 aa
AA seq
DB search
MKTAGYPNINITNFTTSWKDGMAFNALIHKHRPDLVDYTKLKKSNPTHNLQNAFNVAEQK
LGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKQLAVEGKRVGKVLDQAIETEKMI
DKYETLASDLLTWIEQTIIVLNNRKLANSLTGVQQQLQAFNTYRTVEKPPKFQEKGNLEV
LLFTIQSRMRANNQRVYTPKEGALVSDINRAWERLERAEHERERVLRDELIRQEKLEQMA
RRFDRKAAMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAIETDIAAYEERVQALVNI
SLELESERYHDSKRIDVRKDNILRLWDYLQELLKARKGRLDMNLTLQRIFQEMLYIISWM
DEMKARLLSPDFGKHLLEVEDLLQKHALLENDIALQAERVQSASAAALKFANGDSYKPCD
PQVIRDRVQHLDLCYQDLCALAAQRRARLEQSRRFWNFLWEVAELESWIREKEQLFSSLD
YGKDLTSVLVLQSKHSAFEDELGARCTNLEQILAEGDKMIQAKHFGSPKIQECMDDIRRQ
WQQLEDLATFRKQNLQDTQTFFQFQGDADELKAWLLDAKRQMSSDDVGHDEYTTQRLLKN
HNSLRNEAIKNGATIEMLSKQANALPEELQNTPDIQRRLKDVKDLYMELLTLADLRQKKL
DDTMALYTIFSETDACELWMSMKETWLVGLEVPENLEDLEVVQNRLSALAQEMANVQSRV
DDVNKAAKQLEDSRHPRTKEIKECQTRLNKRWEAFKAMVEDKKRKVDSAVSLHNYGLECD
ETGTWIKEKTRVIESTQDLGNDLAAVITIQRKLFGMERDLAAIEAKLTFLKEEAEQLAQD
HPENAEDILARRRELDTAWDKLRKTLKDREDSLGEVSKLQTFLQDMDDFQSWLFKTQKAV
ASEEMPTSLQEAEELLGLHNAVREDINNHEEDYHRVRDTGARVIQGQEDDPQYQQLEQRL
KGLDRGWYELQKIWDSRKHFLDQGLGFQQFLRDCKAVEAILNNQEYTLAHIDKPDTLAGA
EKALKKHEDFVSMMEVNEDKIDGVMQGGQRVVDSNNLYSGKVQEKMDSVQHRHNKNKRRA
DEVSEKLRDNRDLQHFLQNSQDLTVWINEKMLTAQDTSYDEARNLHSKWLKHQAFMAELA
SNKDWLNKVDQEGQELMESKPEFEPIVKERLAQLHELWEKLESTTQEKDRLLFDANRSEL
FDQSLADMKKWLAELQQQLQSGDEDVKDLTNANILLKKHQMTENQVRDRARELEELQEAV
RKHGGPREDQPELEAEQQALQSEFQQLLTPLSQRRGKLEAAKAVHQFYRDLADELLWVEE
RMPLAMSQEHGNNLQSVQMLLKKNQTLQKEVEGHQPRVDEVLERGRRMAAAASTEDRPEA
ERIRDQMQELEQAWARLQDEMAKRRERLSSSNLAQQYFNDADEAEAWIGEQELYMIADEK
AKDEQTAMLMLNRHMILKQAVDDYAYSIQKLSDRAQRMFAEEHPHGEEIIRRQGQVDKQY
AGLKELAEDRRLKLKHTFHHFLLSREVEDLEHWIAERDVAASSQEMGQDLDHVTLLRDKF
REFARETGMIGQDRVNMVNQTIDELIETGHSEAATLAEWKDGINESWADLLELIDTRSQL
LTASYDLLKYFDDGKELVTQIHEKQKELPEDVGEDFSKAESFHRMHAAFERDITALGKQV
QQFQETALRLRAQYAGDKQDAIQAMEREVVEAWKGLLDASDGRRSQLVDTAEKFRFFSMV
RDLMAWMESIIQQIETQEKPRDVSSVELLQKYHQGIRSEIETRGAKFTDCIDLGKSMLTR
KHRDSAEVKEKLVQLMEKRQEMMFKWDDRWDWLRLLLEVCQFARDASVAEAWLIAQEPYV
TSRDLGQTVDEVEKLLKRHEAFEKSTATWEERFSALERLTTLELLELRKQQQEIEQFIKD
EQRSDRESRREDTGFVEESSQLHTIEEQTLSGAMEPSSGQMDGTAGDSTVPIVSEIRESA
SLELEPSVSIVTPKEPEKAATLPSETQRTQTVLQEGMLCRKHDVEGSGKKASNRTWNNLY
CVLRPGQLSAYKDSKSFGHGTTYHGEDPLPLSNATWEILPNYKKKKNVAKLRLADGSEYL
FQCKDEEELQRWSQAMEKAVQILAEEEAPGPSGSKTHSLPTAPTSSAALPEPSSAKKDKE
KKFSRFAKKK
NT seq
6513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgcaggatacccaaacatcaacatcacaaacttcaccaccagctggaaggac
ggaatggccttcaacgccctcatacacaaacaccggccagatctggtggactataccaaa
ctgaagaagtccaatccaacccacaacctgcagaacgcttttaatgtagcggaacaaaag
cttggagtgaccaaactgttagacccagaagatgttttcaccgagaacccagatgaaaaa
tccatcatcacctatgtggtggcattttaccactacttctcaaagatgaagcagctcgct
gttgagggaaagcgagttggaaaggttctggatcaagctatagagacggagaagatgatc
gataagtatgagacgctggcttcagacttgctgacgtggattgagcagaccatcatcgtg
ctgaacaacagaaagcttgccaactctcttactggagtccagcagcagcttcaggccttc
aacacatatcggactgtagagaagccgcccaagtttcaagagaaaggaaatctagaggtg
cttctgttcaccattcagagtcgcatgagggccaataaccaaagggtctacacgcccaaa
gagggagccttggtttctgacatcaacagggcctgggagcgtctggaaagggcggaacac
gagcgggaacgcgtcctgagggatgagctgatccggcaggagaagctggaacagatggcg
cgaagattcgacaggaaggcagcaatgagggagacgtggctcctggagaaccagagactg
gtggctcaggataactttggttatgacctgccggctgtagaagccgctaagaagaagcat
gatgccatcgagacggacatcgccgcatacgaggagcgtgttcaggcgctggtgaacatc
tctttggagctggagtctgagcgttaccacgactccaaacggattgacgtgagaaaagac
aacatcctgaggctgtgggactacttgcaggagcttctcaaggctcgaaaaggacgcttg
gatatgaaccttaccctgcagaggatcttccaggagatgctctacatcatcagctggatg
gatgaaatgaaggctcgactgctgtctcctgactttgggaaacacttgttagaggtggag
gacttactccaaaagcatgcactgctagagaacgacatcgccctgcaggcagagagggta
cagagtgccagtgctgctgctctgaagtttgcaaatggagatagttataagccatgtgat
ccccaagtgatccgtgacagggtgcagcacctggacctctgctatcaggacctctgtgcc
ctggctgcacagaggagggctcggttggagcagtctcgccgcttctggaacttcctgtgg
gaggtggctgagctagagagctggattagagagaaggagcagctgttctcctccctggat
tatggaaaagaccttaccagcgtgctggtgctccagagcaagcacagcgccttcgaggat
gagcttggagctcgctgcaccaatctggaacagatcttggctgaaggggataagatgatc
caagccaagcactttggttctccaaagattcaggagtgcatggatgacatcaggaggcag
tggcagcagctggaggacttggccacatttcggaagcagaaccttcaggacacacagacc
ttcttccagtttcagggtgatgctgatgaactcaaggcctggttgcttgatgccaagagg
caaatgagcagtgatgacgtaggccacgatgagtacacgactcaacggctactgaaaaac
cacaacagcttaagaaatgaagccattaagaatggagctaccatcgaaatgctgtccaag
caagccaatgcactgccagaggagctacaaaacacccctgacattcagaggcgtctcaaa
gacgtcaaggacctttacatggagctcctgactctggctgacctgagacagaagaagctg
gatgacactatggctttgtacaccatcttcagtgagacagacgcttgtgagctctggatg
agcatgaaggagacatggctggtgggcttagaggtgcctgagaacctggaggatttagaa
gtggtacaaaacaggttgagcgctctcgctcaggaaatggcgaacgttcagtcaagagta
gatgacgtcaataaagctgcaaaacagcttgaggacagcagacacccccgcactaaagag
atcaaggaatgccagacacgactaaataaaagatgggaggctttcaaggccatggtagag
gacaagaaaaggaaagtggattctgctgtcagtctacataactatggcttggagtgtgat
gagacaggaacctggatcaaagaaaagacacgagtgatcgagtccacacaggatctgggc
aatgacctggcagctgtcattaccatccaaaggaaacttttcggcatggagagagattta
gctgccattgaggctaagctcaccttccttaaagaagaggcggaacagctggcccaggat
cacccggagaatgcagaggatatcttagcccgaaggagagagctggacacggcctgggat
aagcttagaaaaacccttaaagacagggaagactctctcggcgaggtcagtaagttacag
accttcctccaagacatggatgacttccagtcttggcttttcaagactcagaaagctgtg
gcatctgaggagatgcccacctcgctgcaggaggccgaagagctgctcggccttcacaac
gctgtgcgagaagacataaacaaccatgaagaggactatcaccgggtaagggacactgga
gctcgggtcatccagggccaggaagatgatcctcagtaccagcagctggagcagagactg
aagggcctggaccggggctggtatgaacttcagaagatctgggacagtcgcaaacatttc
ctggaccagggtctgggcttccagcagttcttgagggactgtaaagctgtagaagccatc
ctcaataaccaggagtatactctggctcacatagacaagcctgacacattggcaggggca
gaaaaagcattgaagaagcatgaggactttgtcagcatgatggaagtcaacgaagataag
attgatggtgtcatgcagggcggacagcgagtggtggacagcaacaacctgtattctggg
aaagttcaggagaaaatggactctgtgcaacacaggcataacaagaataagagacgagcc
gatgaggtgtctgaaaagctgagagataaccgtgaccttcagcacttcctgcaaaactcc
caagatctgactgtgtggatcaatgaaaagatgctaacagctcaggatacttcctatgat
gaggccagaaacctccacagcaagtggctcaaacatcaggccttcatggcagagctggcc
tccaataaggactggctcaacaaagtagaccaggagggccaggagctcatggaatccaag
cctgagtttgagccaatagtgaaggagcgcctggcccagcttcatgagctctgggaaaaa
ttggagtccacgactcaggagaaggaccggctgttgttcgacgccaatcgctctgagctt
ttcgaccaaagcctggctgatatgaagaagtggttggctgagcttcagcagcagttacag
agcggagatgaggatgtgaaggatcttacaaacgccaacatcctgctcaaaaagcaccag
atgacggagaaccaggttcgtgaccgggcacgagagctggaagagctccaagaggctgtc
aggaagcacgggggacccagggaggaccagccagagctggaggctgagcagcaagccctg
cagagtgagttccagcagctcctcacgccgctgtcccagcgccgcggcaagctggaggct
gccaaggctgtccatcagttctacagagacctggctgatgagcttctctgggttgaggag
aggatgcctctggcaatgtcacaggagcacggaaacaaccttcaaagtgtgcagatgctg
ttaaaaaagaaccagacgttgcagaaggaggtcgagggccatcagccccgtgtggatgaa
gtgttggagcgaggtagaaggatggcggccgctgccagcacagaggataggccggaggcg
gagcgaatcagggatcagatgcaggagctggagcaggcgtgggctcggctgcaggatgag
atggccaaacgacgggagaggctgagcagctccaacttggcccagcagtatttcaatgat
gctgatgaggctgaggcgtggatcggagagcaggagctctacatgattgctgatgaaaag
gctaaggatgagcagaccgccatgctgatgctgaaccgccacatgatcctgaaacaggct
gtcgacgactatgcttattccattcagaagctctctgaccgtgctcagaggatgtttgca
gaggaacatcctcatggtgaggagatcataaggcggcagggacaggtagataagcagtac
gccggcctgaaggagctggcagaagaccgcaggttgaaactgaagcacaccttccatcac
tttttgctaagccgagaagtagaggacctggaacattggattgctgagagggacgtggcg
gcgtcctcgcaggagatgggtcaagacctggaccacgtcacgctcctgagggataaattc
agagagtttgcacgggagacagggatgataggtcaggatcgggtgaacatggtcaaccag
accatagatgagctgattgaaacgggccacagcgaggcagccaccctggcagagtggaag
gacggcattaacgagagctgggctgatctgctggagctcatcgacactcgctcccagctc
ctcacggcatcttatgacctgctcaagtactttgatgatggaaaagagctggtgacacag
attcatgagaagcagaaagagctgcctgaggatgtgggggaggatttcagcaaagctgag
tcctttcacagaatgcacgccgcctttgagagagacatcaccgccctgggcaaacaggtt
caacagttccaggagacagccttgagacttagagctcagtacgcaggggacaagcaggac
gccatccaggccatggagagggaggttgttgaagcctggaagggcctgctggatgcgtcg
gatggccggcggtcgcagctggtggacacagccgagaagttccgcttcttcagtatggtg
cgagacttgatggcctggatggaaagcatcattcagcagatagagactcaggagaaaccc
agggatgtctcctctgtggaactgctgcagaagtaccaccagggaatccgttcagaaatt
gaaaccagaggagccaagttcaccgactgcatagacctcggcaagtctatgttgactcgc
aaacaccgcgactctgctgaggtcaaagagaagctggtacagctgatggaaaaaaggcag
gaaatgatgttcaaatgggacgacagatgggactggctccgcctcttgctggaggtttgt
cagtttgcaagggacgcttcggtggccgaggcctggctgatcgctcaggagccctacgtg
accagcagggacctgggtcagacggtggacgaggtggagaagctcctcaagaggcatgaa
gcctttgagaaatccactgccacatgggaggaacgcttctcagcactggaacgcctcact
acgctggagttgttggagctgaggaagcagcaacaggagatagagcagttcattaaagat
gagcagcgctcagatagagagagcaggagagaagacacaggcttcgtagaagaatcttca
caactccacactattgaggaacagaccctgtccggcgcgatggagcccagttcaggtcag
atggatgggactgctggtgactccacggtgcctatcgtgtcagagattagagagagcgct
tctctggagctggagccctctgtctccattgtgactcctaaagaaccagagaaggcggcc
accttgccatcagagacccaaaggactcagacggtgctgcaggagggaatgctgtgccgc
aaacatgatgtagagggttctggaaagaaggcatctaacaggacatggaacaacttgtac
tgtgtgctgaggccaggtcagctgtcggcctataaggactccaaaagctttggtcatgga
acgacttatcacggtgaagaccccctacccctaagcaacgccacctgggagatcctccct
aactataagaaaaagaagaatgttgccaagctgcgtctggccgacggaagcgaatatctg
ttccagtgtaaagatgaggaggagctccagcgttggagccaggccatggagaaggccgtt
cagatcctggcagaggaggaggccccgggcccctcggggtccaaaacccacagcctgccc
accgctcccacctcctctgctgccctgcctgagcccagctctgccaagaaagacaaggag
aagaagtttagccgctttgccaagaagaagtga
DBGET
integrated database retrieval system
