KEGG   Cyprinodon variegatus (sheepshead minnow): 107093778
Entry
107093778         CDS       T06110                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107093778 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107093778 (wdr41)
Membrane trafficking [BR:cvg04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    107093778 (wdr41)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Prp19 Beta-prop_EML Beta-prop_DCAF12 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 107093778
NCBI-ProteinID: XP_015244531
Ensembl: ENSCVAG00000013223
LinkDB
Position
Unknown
AA seq 357 aa
NCFTELQVLKGHFDIVRFLVQIDDFRFASAGDDGLVLVWNIECLLVLERLSVWVSGGEEL
CIWDQNFQLLCHRQKHSDTGITALIELPKNCIAAAVDKDIVIYRLMVSADSSVTLTDISR
CTDHHDQIRALINVNDQIFASGSHAGELILWDSSDFSNLAYEHILWEESQSSCQSEIKLA
APKPSEMSIQHLTTNGRLILAAVGSGLYVYDVVTKAVVAYRKAAHDSNVLHTMLLSDSEL
LSCSEDGSVRMWEIQDLPLAAEPASAGFFGMWSFGRSSKQPGPQAKKVLEIPNLKTLELI
GDLIGHSGAIQMFLSFKEKGLVTCSTDHLLILWKDGERQSRLRSQALFQKLEENGGL
NT seq 1074 nt   +upstreamnt  +downstreamnt
aactgcttcactgagctgcaggtgctgaaaggacattttgacatcgttcgatttctggtg
cagattgatgacttcaggtttgcttcagcgggggacgatggtctggttctggtctggaac
atcgagtgtttgcttgtgttggagcgactgtccgtgtgggtctccggcggggaagagctg
tgcatctgggaccaaaacttccagctgctgtgtcacagacaaaagcacagcgacacagga
atcaccgctcttatagagctgccgaagaactgcatcgcagccgctgtggataaagacata
gtgatctacaggttgatggtctcagctgactcctctgtgactctgactgatatttcccgt
tgtactgatcaccatgaccagatccgagctctgattaacgtcaacgatcagatttttgcc
agcggttcccatgcgggggagttgatcttgtgggattcgtctgattttagtaacctggcc
tatgagcacatcctgtgggaggagtcacagtccagctgccagagtgaaataaagctggct
gcccccaaacccagcgagatgtccatccagcacctgaccaccaacgggaggctcatcctg
gcagctgtgggcagtgggctctatgtgtatgatgttgtgaccaaagccgtggtggcatac
aggaaggcggcacatgactccaatgtgctgcataccatgctgctgtctgacagtgagctg
ctgtcgtgctctgaagacggcagcgtgaggatgtgggagatccaagatttacctctggct
gctgaaccagcatctgcagggttctttgggatgtggtcttttggacggtcaagcaaacaa
cccgggcctcaggcgaagaaggtcctggaaattcccaacctgaagacactggagctgatc
ggagatctgatcggacactctggagcgatccagatgttcctgagctttaaggagaaaggc
ttggtgacgtgctctacggaccacctgctgattctgtggaaggacggggagagacagtcc
cgtctgcgcagccaggcgctcttccagaaactggaggagaacggaggcctttga

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