Cyprinodon variegatus (sheepshead minnow): 107093786
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Entry
107093786 CDS
T06110
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107093786
03041 Spliceosome [BR:
cvg03041
]
107093786
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107093786
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107093786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107093786
NCBI-ProteinID:
XP_015244543
Ensembl:
ENSCVAG00000013609
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MDDEQPKTLYVGNLSRDVTEALILELFSQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETASSKQLSFDEVLNQSSLSNCTVYCGGVTQGLTEQLMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIEGNIVKCYWGKETTDIVQGPIQQVQMAQQNTLSFAAQ
PYNQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQAWDQQGYK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacagccaaaaaccttgtatgtggggaacctgtcccgggacgtgacggag
gccctcatcttggagttgttcagccaaataggaccctgtaaaagctgcaaaatgatagta
gatacagcaggtcatgatccatactgctttgtggagttctatgagcatagacatgccaca
gctacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtgaaggttaactgg
gccacaaccccaacgagccagaagaaagacacaagtagtcacttccatgtttttgttgga
gacctgagtccagaaatcaccacagatgacataaaagcagctttcgctccatttggaaaa
atatcggactgtcgtgtcgtgaaagacatggccacaggtaaatctaaaggctacgggttt
gtctccttcttcaacaaatgggatgcagaaaacgccatccagcaaatgggagggcagtgg
ttgggaggccgacagatcaggaccaactgggccacgaggaagcctgctcctaaaacaacg
aatgaaacagccagtagcaaacagctctcctttgatgaggtgttaaaccaatccagcctc
agtaactgtactgtctactgcgggggagtcacacaaggtctcacagagcaattaatgaga
cagactttctcaccttttggccaaataatggaaatccgtgttttcccagagaaaggctac
tcctttgtgaggttcaactcccacgaggcagcagctcatgccatagtttctgttaatggc
acttccatagagggcaacattgtgaagtgttactgggggaaggaaacaacagatatcgta
cagggtcccattcagcaggtacagatggcacagcagaacaccttgagcttcgctgcccaa
ccttacaatcagtgggggcagtggtacagcaacacacagcagatcggtcagtacgtgccc
aatggatggcaggtgccaagctatggcgtctatgggcaggcctgggatcagcagggctac
aagtga
DBGET
integrated database retrieval system
