Cyprinodon variegatus (sheepshead minnow): 107093842
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Entry
107093842 CDS
T06110
Symbol
fmr1
Name
(RefSeq) fragile X mental retardation protein 1
KO
K15516
fragile X mental retardation protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107093842 (fmr1)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107093842 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
107093842 (fmr1)
mRNA cycle factors
Stress granule specific factors
107093842 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
Agenet
Motif
Other DBs
NCBI-GeneID:
107093842
NCBI-ProteinID:
XP_015244628
Ensembl:
ENSCVAG00000011644
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKPATKSTFIKIRLDVPEDLRQMCSKES
AHKDFKKAIRAFSVTFDSEKKQLVILSVNEVTTKRAGMMSDMHFRSLRTKLSLMMRNEEA
NRQLESSRQLASRFHEQFAVRDDLMGLAIGTHGANIQQARKVPGVTNIDLDEETCTFHIY
GEDQDAVRIARTYLEFSEDVIKVPRNLVGKVIGKNGKLIQEVVDKSGVVRVRIEPENDKK
PSAAAAADEGMVPFVFVGTKESISNATVLLDYHLNYLKEVDQLRMERLQIDEQLRQIGGG
GGGGGTGPRNPKDKSYVFDNGMGMGRGAGGGGKPYAGGRGGRGRRGGGAPFTSGTNSEAS
NASETESDHREELSDWSLAPTEELVGGGSLPRRTDGRRRGGGGGLRGRGGRGRGGGGYKG
DDMQWGDPRPRHVRDSKPRGQEETLQIRVDGNNERSVQHSSAGRGGGAAHPSSQGAIGLG
GEGQPRHHHQRPMRDRGIKKDKQDAPALVNGVS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaggagagttttatgtgatcgagtatgctgcatgcgacgccacgttgaacgag
atcgtgacgctggagcggctacggccagtgaaccctaataaaccggccaccaaaagcacc
ttcattaagatcaggctggatgttcctgaagacctgcgacagatgtgctccaaggagtcg
gcgcacaaagactttaagaaggccatcagagcgttcagcgtcaccttcgactctgagaag
aagcagctggtcatcttgtcggtgaacgaggtcacgacgaagagggccggtatgatgagc
gacatgcacttccgcagcctccgcaccaaactgtcgctcatgatgcgcaacgaggaggcc
aacaggcagctggagagctccagacagctggcgtctcggtttcatgaacagtttgcggtt
cgggatgatctaatgggtctggccatcgggactcatggagccaacattcagcaagcgcgt
aaagttcctggagtcactaacatcgacctggatgaggagacctgtaccttccacatatat
ggggaggaccaggatgctgtccgaatagccaggacttacctggagttttccgaagatgtc
atcaaggttccccggaacttagtcggaaaggtgatcgggaagaacggcaagctgatccag
gaggtggttgataaatctggtgtggtcagagttcgaatcgagccggagaacgacaaaaag
ccctcagcggcggcggcagcagatgagggaatggtgccatttgtgtttgttgggaccaag
gaaagtatttccaacgccaccgtgctcctggactatcacctcaactaccttaaggaggtg
gatcagctgcgcatggagcgccttcagattgacgagcagctgagacagataggaggggga
ggcggaggagggggaacgggtcccagaaaccccaaagacaaatcctatgtgtttgataat
gggatggggatgggcagaggagcaggaggaggcggaaagccctacgcaggaggaagaggt
ggacgaggccggagaggtgggggggcaccgttcacgtcaggaaccaactcagaggcttcc
aatgcttcagagacggagtccgatcacagggaggagctgagcgactggtccctggctccc
actgaggagctcgtaggaggcgggtccctgcccagacggacagatgggagacggcgaggc
gggggcggaggtctgagggggcgtggaggcagggggagaggagggggaggatataaaggt
gatgacatgcagtggggagacccgagacctcgacacgtccgagactctaagccgagaggc
caagaagaaactctacagattcgtgtcgacggaaacaacgagcgcagcgtgcagcattcg
tcagctggccgaggaggaggagcagcgcatccttcgtctcagggcgccatcggcctcgga
ggggagggccagccccgccatcatcaccagagacccatgagggatcgagggataaaaaag
gacaaacaggacgctcctgcactggtgaacggagtgtcgtag
DBGET
integrated database retrieval system
