Cyprinodon variegatus (sheepshead minnow): 107094002
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Entry
107094002 CDS
T06110
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107094002 (ccdc174)
03041 Spliceosome [BR:
cvg03041
]
107094002 (ccdc174)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107094002 (ccdc174)
Spliceosome [BR:
cvg03041
]
Complex C
Other components
EJC/TREX
107094002 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
107094002
NCBI-ProteinID:
XP_015244880
Ensembl:
ENSCVAG00000005037
UniProt:
A0A3Q2DRH0
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDKKKKPLEVAASTLVDLKAELYRKQEQFKREKLGQENAEAGLKTKLNSKKPNIWSKQNA
GVSARAAKDAEQLSEEQVTLDTARRKLEEKARLYEQMTKGDFPDEETEGLYLVDFTQKII
DKKRETFAQKEKEEEEKACLSPIPPPQNPDEEWVDYVDALGRSRRCMKKDLPSFMKMDQD
LNGKGTVSSDKTLLSEDMRRELQRQEWEREEEEAMKRPVGPIHYEDIRAQEARELGVGYF
AFSQDQEQRRKQRETLDMLRDQTTDQRTKRERLKEKRQAMLRARLAKVRQRKKKAKMDGT
EEEEKEEENQGEEGEDEEVGPFPPSDVPPEVSTLKKVEVEIQERRDTKPGVPHVREWDRG
KEFMFSEWKNRLREERESEFAPPSAYFSEDRRPKLGNTKSQQNKSNMLFKSTKYPEEVTK
SETKPEPPVVSSPPQPQQEDPPAYFQSPPPTPAGSSSSSAPPFIPQYPPPPPFYPPFPPP
PFQFAGPPHSHPPFIPQYQYPAQYAPQEPPPPGEETQTQQPPGSAPQSLDDMLSFYRNST
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaaccccttgaagtagcagcgtcaactctggttgaccttaaagct
gaactgtacaggaagcaggaacagtttaaacgggagaaactcggacaggaaaatgccgaa
gctggactaaaaaccaaactaaactccaagaagcccaatatttggagtaaacaaaacgct
ggagtttcagctcgagctgccaaagatgcagagcagctgtcggaggaacaagtcactctg
gacacagccaggcgcaaactggaggagaaggccagactctatgagcagatgacaaaagga
gacttcccagatgaagagacggagggactttaccttgttgacttcacccagaagataatt
gacaagaagagagaaacatttgcacagaaagagaaggaggaggaagaaaaggcctgtttg
tctcccatccctcctcctcagaatccagatgaggaatgggtggattatgtggatgctttg
ggccggtctcgaagatgcatgaaaaaagatctgccaagtttcatgaaaatggaccaggac
cttaatggaaagggaacagtctccagtgataagacgttactctcagaggacatgcgtcga
gagctgcagaggcaggagtgggagagggaggaggaggaggccatgaagaggccggtcgga
ccgatccactacgaggacattagagcacaagaggcgagagagcttggtgtgggatacttt
gctttctctcaggatcaagaacagcgcagaaagcaaagagaaactctggacatgctcaga
gaccagaccacagatcagcggactaaaagagaacgactgaaagagaagaggcaggccatg
ctgcgggctcgactggccaaggttaggcagaggaagaagaaggctaagatggatggcact
gaggaagaggagaaagaagaagaaaatcaaggagaggaaggggaggatgaagaagttgga
cctttccctccatcagatgtgccaccagaggtcagcactctaaagaaggtggaagtggag
attcaggagagaagggataccaaacctggagttccccatgtcagagaatgggacagaggc
aaagaattcatgtttagtgagtggaaaaatcgacttcgagaggagcgagagtcggagttt
gcccctccctctgcatacttcagtgaagacagaagaccaaaactgggaaatactaaaagt
cagcagaataaatccaacatgctctttaaatcaactaaatatcctgaagaggtcactaaa
agtgagaccaaaccagagcctccagttgtgtcttcacctcctcagcctcagcaggaggat
ccccctgcatattttcagtctccaccacccactcctgcagggagctcctcgtcttcagct
ccaccgtttattccccagtacccaccaccgccacctttctatcccccgtttccccctcct
ccctttcagtttgcaggaccgccacattcccatcctccattcatcccacagtaccagtac
ccggcccagtatgctccacaggagccacctcctccaggagaggagactcagactcagcag
cctcctggaagtgctcctcagagtttagatgacatgttgtccttctacaggaactccacc
tga
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