Cyprinodon variegatus (sheepshead minnow): 107094106
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Entry
107094106 CDS
T06110
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
cvg04517
IgSF CAM signaling
cvg04519
Cadherin signaling
cvg04530
Tight junction
cvg04810
Regulation of actin cytoskeleton
cvg05100
Bacterial invasion of epithelial cells
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107094106
04519 Cadherin signaling
107094106
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107094106
09144 Cellular community - eukaryotes
04530 Tight junction
107094106
09142 Cell motility
04810 Regulation of actin cytoskeleton
107094106
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107094106
05100 Bacterial invasion of epithelial cells
107094106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107094106
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107094106
Membrane trafficking [BR:
cvg04131
]
Others
Actin-binding proteins
Arp2/3 complex
107094106
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
107094106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_EML
eIF2A
RMC1_N
Beta-prop_TEP1_2nd
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Tricorn_2nd
SH3_3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
107094106
NCBI-ProteinID:
XP_015245010
Ensembl:
ENSCVAG00000022598
UniProt:
A0A3Q2G6Y7
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTMKEGTWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTAWGSKMPFGEVLFESGGSGAAAPTSGGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTGTVTSLSSETLPLLCVTFITENSLIAAGHDCYPVLFVYEGTTLTFGGKLDVPKQAA
AKGISARERFQNLDRRASETQSTDKDLNTLHKNSISQISVLEGGRNQCSKFCTTGMDGGM
GIWDVKSLESAMKNLKIV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccatagcttcctgctggaaccaattagctgtcatgcatggaacaaagatcga
acccagattgccctgtgccccaataaccatgaggttcatatctataagaaagatgggacc
aagtggaccaaaatccatgagctgaaagagcacaatggccaggtaacagggattgactgg
gccccagacagtaaccgcattgtcacttgtggcgctgaccgtaatgcttatgtgtggacc
atgaaagagggaacatggaagcccaccttggtcatcctgaggatcaaccgagccgctcgc
tgtgtgaagtggtcaccaaaggagaacaagtttgctgtaggcagcggctcacggctcatc
tccatctgctactttgagcaggaaaacgactggtgggtgtgcaagcacatcaagaagccg
atccgttctacaatcctgagtttggactggcatcctaataacgtcctgttggctgctgga
tcctgtgacttcaaatgcagggtgttctcggcgtacattaaagaggtggaggagaagcct
ggccccactgcttggggcagcaagatgccatttggggaggtgctttttgagtctggaggt
tctggagctgcagctcccacatcaggaggaggtggcggctgggtgcacagcgtgtgcttt
tcacattctggaaaccgtttggcctggacttctcacgactccacggtgtcagtggctgaa
ggagggaagaccggcacggtgaccagcctgagctccgagactcttcctctcctgtgtgtt
accttcatcactgagaacagcctaattgctgctggtcatgactgttacccagtgctgttt
gtgtatgaaggtaccacgttgacatttggtggcaagttggatgttcccaagcaggctgca
gcgaagggcattagtgccagggaacgttttcagaacctggaccgtcgtgcctctgagacc
cagagcaccgacaaggacttaaacacgctccacaagaacagcatcagccaaatctctgtg
ctggagggaggaagaaaccagtgcagcaagttctgcaccactggcatggatggaggaatg
ggcatctgggatgtcaagagtctggagtctgctatgaagaatttgaagatagtgtga
DBGET
integrated database retrieval system
