Cyprinodon variegatus (sheepshead minnow): 107094256
Help
Entry
107094256 CDS
T06110
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107094256 (tmc3)
03037 Cilium and associated proteins [BR:
cvg03037
]
107094256 (tmc3)
Transporters [BR:
cvg02000
]
Other transporters
Pores ion channels [TC:
1
]
107094256 (tmc3)
Cilium and associated proteins [BR:
cvg03037
]
Other cilia and associated proteins
Stereociliary proteins
107094256 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
107094256
NCBI-ProteinID:
XP_015245262
Ensembl:
ENSCVAG00000016633
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MSSASEPVAPSSRSLSAARRHRSVRKNSRRLYSAYQQGSSEEEADKEVDSNDPEEMFQNI
QYQKEIIANIRSRPWPMRRKLKVLKQAREIVLKYEGQLTRTRGYQTAGADLLKKLYRLLY
NVVVTFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGASF
GTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGSVRKIGSAGYRLPLAYFLVG
MAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAECKGAAIVN
NIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQEKPEL
TLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSLIIAL
LDKVNIMSSAPQLSSNNWTDSSSTTTSLSAPVSRISSSEHLNSTMATITTAINFIHNRSV
SVTASNQSSPFEKTVRSQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFIRGLVVRYLS
DCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSW
AVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSEHCGPFSGQEKIY
DIISDTVASDFPLWFSKVMSYVTSPVVVLPAVLLLFMLIYYLQAIARSLKFTNNQLRMQL
QTERTEDKKKVFQLAAARLQAPEASADKKPDQQETDVQSQEASIHTSSPGQNGSVTNVQS
PVHRSNSIRTITQSASRAELNPGQVAGSVRSPAAVLLPKRQVELLCNRPPHFISGPSGSC
RSKSCHHMASNSPAACSGTMHTDPLYRKTVRSLHPVEAAGIIAAQSYGGRRGHTTRYVIV
NEHRPRKKLLCSATRIPRHYLMEEPTEILELYPRNMKHFTPRTVHPHRSHTTQQLLKDQE
EPGKGRKRTSLGKSHRPRPLSEHQQQAHFYIGERLESFRGSHAARYGMQDDIEAVDGREE
VDWEDGPGSPSPAGVGETDMQRRPVLSAGRQSQSPVRIRAVKSHLKPKLRSQLENPLTES
DSASVASSSDQQNSSTDQYIQVIHSKERHLGSDIRQEKLSKKKTNLDLNGSDSQDLVCSN
V
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagcatctgaacctgtggctcccagcagcaggtccctgtctgctgccaggaga
catcggagcgtccggaagaactccaggaggctttactctgcttaccagcagggctcctca
gaggaagaggctgataaggaggtggacagcaacgacccagaagaaatgttccagaacatt
cagtaccagaaagagatcatcgcaaacatccgctccaggccctggccaatgagacggaag
ctcaaagttctgaagcaagcccgagagattgtcctgaagtacgaaggccagctgacaaga
accagaggctatcagacggctggagctgatctgctgaaaaaactctacaggctgctttat
aacgttgtcgttaccttcattccatgggaagtcaggatcaagaaaattgaaagtcacttt
gggtctggtgtggcctcctatttcatctttctccgctggttgtttgggataaacatcgtc
ctgaccatcatgacaggagcctttgtggtccttccagagctgctggccggagcttcgttt
ggaacaacaagaagtaaaactatccccaaggagcatctagcatcagcccaggacttggac
accatctggtctctagggggctacctgcagtactccgtcttattctatggttattacggc
agcgtgaggaagatcggcagcgccggctaccggctgccgctggcatacttccttgttggg
atggctgtattcgcctacagcttcatcattttgttacgcaaaatggcgaagaattcgcgc
ctgagtctggccagcgcatctgatgaaaacttcaccttctgttggagagttttctgtgcc
tgggactacctgataggaaaccctgaggctgcagagtgcaaaggagctgcaatcgtgaac
aacatcagggaagcaatcgttgaagagcaggagaagaagaaggataccagcctggctgtt
ctcatcagtctgcgtattttagccaatatcctggttctgctgtcgctcgctgggagcatc
tacattatctattttgtggtagaccgatctcagaaactggagcaggagaagccggagctg
acactgtgggagaagaatgaggtgagcgtggtggtttccctcatcacaatgattgctcct
tctgcatttgagctggttgcccagctggagatgtaccacccgaggacctctctgcggttc
cagctggccagagtccttgttctataccttgggaatctctacagcctcatcattgctctt
ctggataaagtcaacattatgagttcagctccccagttgagctctaataactggactgac
agcagctccaccacaaccagcctttctgccccagtatcaaggatctcctcatctgagcat
ctcaacagtaccatggcaaccatcacaacggctatcaacttcatccacaacagaagcgtc
tctgtgacagcatctaatcagagctctccctttgagaagaccgtccgctcccaggaccag
tgctgggagacctatgttggacaggagatgttgaagctttctatcattgacatgatcttc
acagtagccagcatcttactcattgacttcatcagaggtctggtcgttcgctacctgagt
gactgctgctgctgggacttggagagcaagtttccagagtacggagaatttaaaatagct
gaaaatgtcctgcacttgatttacaaccaagggatgatctggatgggagccttcttctct
ccatgtctgcctgccttcaatgtgctgaagctgattggtctgatgtatctgaggagctgg
gctgtgctcacctgtaatgttcctcaccagcaggtgttcagagcttccaggtccaataat
ttctacctggctatgctgctgttcatgctcttcctgtgcatgcttcccaccatctttgcc
atcgtgcgctacagaccttctgagcactgtggaccattcagtggtcaagaaaagatttat
gacatcatctcagacacggtggcctccgacttcccgctgtggttcagtaaagtgatgagt
tacgtcaccagcccggtggtggtcctgcctgcagtgctgctcttatttatgctgatatat
tatctccaagccatcgccagatccctaaaattcaccaacaaccagctgaggatgcagctc
cagactgagcggacggaggacaagaagaaagtttttcagttggctgcagcgaggctacaa
gctccagaggcttcagctgacaagaagccagatcagcaggagacggatgtccaaagccag
gaagcctccatacacacttcgtctccagggcagaatggcagcgttacaaacgtccagtct
cctgtccaccgtagcaacagcatccgcaccatcacccaatcagcttctagggcggagctt
aaccccggacaggtggctggatcagtccgaagtccagctgcggtcctactgcccaaacgc
caggtggagctcctatgtaacaggccaccacatttcatcagtggcccaagtggttcctgt
agatccaagtcctgccaccatatggcatccaattcgccggctgcttgttctggcaccatg
cacaccgacccgttgtacaggaagaccgtacgctctctacaccctgtggaggctgctggg
attatcgccgcacaaagctacgggggccgtcgcggtcacaccacccgctatgttatcgtc
aatgagcaccgaccccggaagaagctgctgtgctccgccacacggatcccgaggcactac
ctgatggaggagcccacagagatcctggagctgtacccacgcaacatgaagcacttcacg
cctcgcactgtccacccccaccgctcgcacacgacgcagcagcttcttaaggaccaggag
gaacctgggaaaggcagaaaaaggacctcgttaggcaaaagccatcggccccgccctctg
tcggagcaccagcaacaagcacacttctacattggggagaggttagagagcttcagagga
agccatgccgcgagatacggaatgcaggacgacattgaagcggtggatggtagggaggag
gtggactgggaggatggcccgggttctccttctccggccggcgttggagaaactgacatg
cagaggcgtcctgttctatctgcagggaggcagagtcagtcccccgtcagaatcagagct
gtgaagtctcacctgaagcccaagttaaggagccagctggagaatcctctaactgaatcg
gactcagcctctgtggcttccagcagcgaccagcagaacagcagcacagaccagtacatc
caagtcatccacagcaaggagcgccacctaggctctgacatcaggcaggagaagctgtcc
aagaagaagaccaacctggatctgaacggcagtgactctcaggatttagtctgctccaat
gtgtga
DBGET
integrated database retrieval system
