Cyprinodon variegatus (sheepshead minnow): 107094274
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Entry
107094274 CDS
T06110
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107094274 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107094274 (nup58)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107094274 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Siah-Interact_N
Nup49_C
PSY3
Tox-ODYAM1
Motif
Other DBs
NCBI-GeneID:
107094274
NCBI-ProteinID:
XP_015245292
Ensembl:
ENSCVAG00000003877
UniProt:
A0A3Q2CCV7
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSGFNFGTLGSSNTGGGFSFGGVTSTPAASTGGLSFGTPVGAAAGTPASTASTTQSLGLG
GSLFAQKPAGGFSFNTPASTSSAPSTGLTLGAPATTSATTGFSLAFNKPTASATPFSLTT
TTTSSTAGTGLNFGSNLTSTAPQQPAATGFTLSLGGAASSAASTAPSLGASLFSSTGTTG
LGQTTLGGGAGLTLGSLLATSTAASVAPAPSIGLGGVDFSTSSENKSDPSSGTNAQDSKA
LKDENLPPFICQDVDSFQKFVKEQKQVQEDISRMSSKTIAKVQDDIKSLKQLLSVCASGL
QRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVDQFEVQLQQFR
QQIEELENHLTTQSSGSHITPQDLTLAMQKLYQTFVAQAAQLQSVHENVKILKHQYLSYR
RAFLEDSTDIFESKRASNRKWQSAPRVTTGPAPFSSVPNAAAVAMAATLTQQQQPTPGTQ
APLGAGFGNPFASAVGTSLGSSTLGGFGGGPGFGGIGTGGSSFGFSSTSKPAGGSLSAGF
GSTSSSGFNFSNPGINQSAGLTFGVSNPSATTFGTPLLQLKKPPAGNKRGKR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtttaactttggcacccttggctccagcaacactggtggaggattctcattc
ggaggagtcacaagtacacctgcggccagcactggtggcctttcttttgggactccagtg
ggagcagcagcaggaaccccggcttccactgcaagtaccacccaatcccttggtctggga
ggctctctctttgctcagaaacctgctgggggcttctccttcaacacccctgcctcaact
tcctctgcacccagcactggtcttacattaggtgcaccagctactacatctgcaaccaca
ggttttagtttggccttcaacaaacccactgcatcagcaacacctttttctctcaccaca
actaccacctcctcaactgctgggacaggcttaaattttggctccaacctgacatccacg
gctccgcagcagcctgcagccacagggttcacactcagccttggtggcgcagcttcctct
gctgcatcaactgcaccatcactaggcgccagtctcttctccagcactggaactacaggt
ttgggtcagaccacgctgggaggaggagctgggttaaccttgggctcgctgttggctacc
tccacagcagcttcagttgctcctgcaccgagtattggtctgggtggagttgacttcagc
acgtcctctgagaataaaagtgacccctcatctggaaccaatgcacaggacagcaaggct
ttaaaagatgagaatctgcccccctttatttgccaagatgttgacagttttcaaaaattt
gttaaagaacagaaacaggttcaagaagacataagcaggatgtcttcaaagactattgca
aaagtccaagatgacatcaagagtctcaaacagctgctttctgtctgtgcaagtgggctg
cagcgccaggctctggctattgacaagttgaagttggagaccgcacaggagctgaaaaat
gctgacatagccctgcgcacccaaaagacgccccctggccttcagcatgaaaacacggct
ccctcagattattttcgtagcttggtggaccagtttgaggtgcagctgcagcagttccgc
cagcagatcgaagaactggagaatcacctgaccacccagagcagtggctcacacatcacc
cctcaagacctgactctggccatgcagaagttgtaccaaacatttgttgctcaggcagct
cagcttcagtctgtccatgagaatgtgaagatcctgaagcaccagtacctttcttaccga
agagcctttctggaagactccactgatatctttgagtctaaacgagcctcaaacagaaaa
tggcagagcgcgccacgtgtcacaaccggacctgcaccattttccagtgtacccaatgct
gcagctgttgcaatggcagcgacgttgacgcagcaacagcagccaactccaggcacccag
gcacccttgggggcagggtttggaaacccctttgcctcagctgtaggcactagtttgggc
tcttctacacttggaggttttggtggagggccaggatttggtggcatcggaactggaggg
tcatcttttgggttctcctctaccagtaagcctgcagggggcagtctgagtgcaggtttt
ggtagcaccagcagctctggcttcaacttcagcaaccctggcatcaaccagtccgctggc
ctgacgtttggcgtttcaaacccgtcagccaccacctttggcacaccccttctccagcta
aagaagcctcctgctggcaataaaaggggaaagagatag
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