Cyprinodon variegatus (sheepshead minnow): 107094312
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Entry
107094312 CDS
T06110
Symbol
lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107094312 (lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107094312 (lrrc4c)
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
NGL family
107094312 (lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
Ig_2
LRR_14
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
107094312
NCBI-ProteinID:
XP_015245342
Ensembl:
ENSCVAG00000014795
UniProt:
A0A3Q2D2A1
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MFNKMTSSQQQMMPGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRSLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGAF
NGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVKLDELEMSGNQLSIIRPGSFK
GLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHH
NPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTQYKGRYIGELDQNYFHCYAPVIVEPP
ADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQDT
GTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTTVQQKVGPT
PSAGIWETHSPTSTTTKVRTPLSTRATEKPYTIPVTEGSLNGLDEVMKTTKIIIGCFVAI
TLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPSLEHEQL
NHYNTYKIAYNHASTMNSIHSSAHEPLLIRATSKDNVQETQI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatgacctcctctcagcagcagatgatgccaggtcctaggtggaaccgg
gccttgtccgaccctttatttgtgctgctcttagccctccagttgctggtggtggcagga
ctggtgcgtgcacaaacctgtccttcagtttgctcctgtagtaaccagtttagcaaggtt
atttgcacccgcagaagtttgcgagaagttcctgatggaatctctaccaacacacggtat
ttgaacttgcaagaaaatctcattcaggtcattaaggtggatagcttcaaacatctaaga
catttggagattttgcagctaagcaaaaaccacatacgtaaaattgagctaggggctttc
aatggactggcaagtctcaataccttggagctttttgataatagacttactaccattcca
aatggagcatttgagtacctgtccaaactgaaggagctctggcttagaaacaacccaata
gaaagcattccatcctatgcttttaacagagttccgtcattacgaaggttggacctaggc
gaactcaaacggctctcatacatatcagagggggcttttgagggactgagcaatctgcgc
tacttaaatttgggaatgtgcaatctgaaggaaattcccaacctcacacccttggtgaag
cttgatgaacttgaaatgtctggaaaccagctatctattatccgacctggttcatttaaa
gggcttatccacttgcagaagctatggatgatgcatgctcagatccagacaatagaaagg
aactcatttgatgaccttcagtcacttgtggagctcaaccttgcccacaataatcttaca
cttttgccccatgatctcttcactcctttacatcacttggagagggtgcacttgcatcac
aacccatggaattgcaactgtgatatcctttggctaagttggtggcttaaggagatggta
ccagcaaacaccagctgctgtgctcgctgcagctcacccactcagtataagggtcgatac
attggtgagctggaccagaattactttcactgttatgctcccgttatcgtggagcccccc
gcagacttaaatgtaacagagggaagtgctgcagagttgaaatgtagagccagctcattg
acctctgtgagctggattacacccaatggttcaataatgacacatggtgcatacaaagtc
agaatctctgtgctaaatgatggcacactgaattttactaatgttaccatgcaggacaca
gggacgtacacatgtatggttagtaattctgcaggtaacacaacagcctcagcaacactt
aatgtgtcctctacagagaacagcagctttagctacttcaccacagtgacagtagagaca
atagaaacacctcataatgaaggctttaccaccactgttcaacagaaagtgggccccaca
ccctctgcaggtatatgggaaactcattcacccacctcaacaaccacaaaagttcgaacc
ccactctccacacgtgcaacggaaaagccctacacaattcctgtgacagaaggctcgctc
aacggtttggatgaggttatgaagacaacaaaaatcatcattggctgctttgttgcaatc
actcttatggcagcagtcatgctgatcatcttctacaagatgcgcaagcagcatcaccag
cagaatcatcatgcacccacacgcactattgagatcatcaatgtggatgaggactgcgtc
acagggggcccaggaatggagggtcaccttactctgccgtctctggagcatgagcaactt
aaccactacaatacctataagattgcctacaaccatgcttctactatgaattccatacac
agctcagcacatgaacctttgttaatccgggccacctcaaaagacaatgtacaagagacc
caaatctaa
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