Cyprinodon variegatus (sheepshead minnow): 107094314
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Entry
107094314 CDS
T06110
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
107094314 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107094314 (rag1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107094314 (rag1)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107094314 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_10
zf-C3HC4_4
zf-RING_UBOX
U-box
zf-RAG1
Motif
Other DBs
NCBI-GeneID:
107094314
NCBI-ProteinID:
XP_015245345
Ensembl:
ENSCVAG00000014808
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MAAESSETDGPRSFMPAELQHPHSKYSQWKFKLFRVKSMEKAPLPSEAQPQIGASLGIPP
PTAPNIETDHGAGLASVMKLCLGGKSKENVEGPGRRVDMKLQEMETHMNHLRGLCRICGM
AVRKVKGPVHEVHGDLDEASKCVLRKMGCKFTSWPEVLLKVFKVDVTDDVESIQPLFFCH
RCWLAAIRGGGVCSFTRTKVPEWKPHTSHCYLCFPKKSSFQRTGRKRRKVVPKVQSLAKR
ARWDHSDHSTVGEKKAQKPFGDRHSSGLKTWKKSSIQREQWVKNITHCQNDHLNTKLIAE
KLPGDFIISFTCLVCDHLLCDPVQAPCGHLFCRSCIIKFTHVLGPHCPACNFSCAPDELI
PPAKTFLSTLYSLPLLCPCEGCGEHVQLGVFKAHCLNHEFEKGENRHSSQFQNYLLINKG
GRPRQHLLSLTRRAQKHRLRDLKSQVKVFADKEEGGDLKSVCLTLFLLALRSGNEHRQAD
ELEAMMQGRGFGLSPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAEKE
LLPGFHQFEWQPALKNVSTSYNVGIINGLSGWTSSLDDSPADTITRRFRYDVALVSALKD
LEEDIMEGLRDTGMEDSACTLGFRVMIKECCDGMGDVSEKHGGGPAIPEKAVRFSFTIMS
VSIQGEDDQEEVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLGPIVAERNAMKESR
LILSIGGMLRSFRFYFRGTGYDEKMVREMEGLEASGSTYICTLCDSGRAEAAQNMVLHSI
TRSHDENLERYEIWRTNPFSESVDELRDRVKGVSAKPFLETQPTLDALHCDIGNATEFYK
IFQDEIGEVYKRPNPSREERRSWRAALDKQLRKKMKLKPVMRMNGNYARRLMTMEAAEVV
CELVPSEERREALRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSSTFKY
RYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFELED
VLKHHWLYTSKYLQKFMEAHKDSAKAFQATIDSEEIHDDEDVTLEITEF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagagctcggagacagatggtcccagatccttcatgcctgctgagcttcag
catcctcactctaagtattctcagtggaagtttaagttgtttagggtgaagtctatggag
aaggcacctctgccgagtgaggcacagccacagataggagcttcattagggatcccacct
cctactgcaccaaatatagagacagatcatggtgcaggactggcaagtgttatgaaatta
tgccttgggggaaaaagcaaggaaaatgtggagggccctggcaggagagtagatatgaaa
ctgcaggaaatggaaacgcacatgaaccatctcaggggtctttgtcgcatttgtggaatg
gcagtaaggaaggtcaaagggccggtgcatgaagtccatggagatctggatgaagcaagc
aaatgtgtgcttcgcaaaatgggctgcaagtttacaagctggccagaggtcctcctgaag
gtctttaaagtggatgtgacagatgacgtagaatccatccaacctctgttcttctgccat
cgctgctggctggctgccattcgtggagggggtgtctgcagcttcactagaacaaaagtt
ccagagtggaaaccccatacctcccactgctacctgtgcttcccaaaaaagtcatcattt
caaaggactgggagaaagaggaggaaagttgttccaaaagtccagagtttggccaaaaga
gccaggtgggaccacagtgaccacagtactgttggtgaaaaaaaggcccagaagcccttt
ggagaccggcacagttctggactgaagacatggaaaaaaagcagcatccagagagaacag
tgggtgaaaaacatcacgcactgccagaatgaccatctgaacaccaaacttattgcagag
aagctcccaggggattttataatttctttcacctgcctggtctgtgatcacctgctctgt
gatccagttcaggccccctgtgggcacctcttctgccgcagctgcattattaaatttact
cacgttctgggaccccactgccctgcatgcaacttctcttgtgccccagatgagctcatc
cctcctgccaaaaccttcttatcaaccctctattctctgcctctactgtgcccctgtgaa
ggttgtggtgagcacgtgcagctaggtgtgttcaaggcccactgtctaaaccatgagttt
gagaaaggtgaaaacagacactcatctcagtttcaaaattacctgctaattaacaagggg
gggagacctcgccagcatttgctctctttaacccgtcgtgcccagaagcaccgactgagg
gatctgaagagccaggtgaaagtgtttgcagacaaagaagaaggaggcgatctgaagtca
gtgtgtttgacactgtttcttcttgcactgagatctgggaacgagcaccggcaggcagat
gagcttgaggccatgatgcaaggcagaggctttggattgagtcctgcagtgtgcttagcc
attcgggtcaacacattcctgagctgcagccagtatcataagatgtatcggacggtcaaa
gctacaagtggccgtcagatctttcagcctttgcacacccttagagctgcagaaaaggag
ctcctccctggctttcatcagtttgaatggcagccagctctcaaaaatgtgtccacgtct
tacaatgttggcatcatcaacggactgtcaggatggacctcctcactggatgactcccct
gctgacaccatcacccgtcgctttcgctatgatgttgcactagtttcagcgctgaaggat
cttgaggaggacatcatggaagggctgagagacactggtatggaagacagtgcttgcacc
ctgggcttcagagtcatgatcaaggagtgttgtgatggcatgggtgatgttagcgagaag
catggtggaggaccagctattccagagaaggctgtccgcttctctttcactattatgtca
gtctctattcagggtgaagatgatcaggaagaagtcacaatttttacggagccaaagcca
aattcagagctttcctgcaagcccctttgtctaatgtttgtggatgagtcagaccatgag
actttgactgctgttttggggcctattgttgcagagcgaaatgcgatgaaagagagcagg
ctcatcttatccattggtggcatgctacgctcctttcgcttctactttaggggcacaggc
tacgatgaaaagatggtgcgtgagatggagggcctggaggcctcaggatccacatacatc
tgcactctgtgtgactctggtcgtgcggaggccgctcagaatatggtgttacactccatc
acccgcagccatgatgagaacctggaacgttatgaaatatggagaaccaaccccttttct
gagtctgttgatgagttgagagacagagtcaaaggagtctcagccaagcccttcctggag
acccagcccacactggatgcattgcactgcgacataggtaatgccactgagttctacaaa
attttccaggatgaaattggagaagtttataaaaggcccaaccccagcagagaggaaagg
cgcagctggagggcagccttggacaaacagctgagaaagaagatgaagcttaaaccagtg
atgaggatgaatgggaactatgcccgaaggttaatgaccatggaggctgcagaagtggtt
tgtgaactggtgccctcagaggaaaggagagaggccctgagggagctcatgaggctctac
ctccagatgaaacctgtatggcgtgctacctgtccagccaaggagtgccctgaccagctg
tgccgctacagttttaactcacaacgttttgctgacctgctctcctctaccttcaagtac
agatacaatggaaaaataaccaactatctgcacaagacccttgcacatgtgcctgaaata
atagaaagagatggatccataggagcctgggccagcgaggggaatgagtcagcaaataaa
ctgtttaggcgtttcaggaagatgaatgcacggcagtcaaaggcctttgagctggaagac
gtgctgaaacaccattggctctacacctccaagtacttgcaaaagttcatggaggctcac
aaggactctgctaaagctttccaggcaacaatagattcagaggagatccatgatgatgag
gatgtgactctggaaatcactgagttttga
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integrated database retrieval system
