Cyprinodon variegatus (sheepshead minnow): 107094358
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Entry
107094358 CDS
T06110
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
cvg03083
Polycomb repressive complex
cvg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107094358 (rbbp4)
03083 Polycomb repressive complex
107094358 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
107094358 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107094358 (rbbp4)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107094358 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
107094358 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
107094358 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107094358 (rbbp4)
PRC2.2
107094358 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107094358 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
107094358 (rbbp4)
Chromatin remodeling factors
NuRD complex
107094358 (rbbp4)
NuRF complex
107094358 (rbbp4)
NuRF complex (fruit fly)
107094358 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
107094358
NCBI-ProteinID:
XP_015245400
Ensembl:
ENSCVAG00000012801
UniProt:
A0A3Q2E634
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaagacgctgcatttgatgatgccgtggaagaaagggtgattaatgaggag
tacaagatctggaagaagaacaccccttttctctatgatctggtcatgacgcatgccctg
gagtggcccagcctgaccgcccagtggctgccagatgtcaccagaccagagggaaaggac
tacagtgtgcatagactggttttggggacacacacttctgatgagcagaatcaccttgta
atcgccagtgttcagcttccaaatgacgatgcccagtttgatgcctcacactatgacagc
gagaaaggagagtttggaggctttggctctgttagtggaaaaatagagattgaaataaag
atcaatcatgaaggagaagtgaatagagctcgttatatgccccagaacccctgtattatt
gccacaaaaaccccaaccagcgatgtgctggtctttgattacacaaaacacccctccaaa
cctgatccctctggagaatgcaccccagatctgcgtctcaggggccaccagaaggagggc
tatggcctctcctggaacccaaacctcagcggatgcctccttagtgcttctgatgatcac
actatatgcctctgggatatcagcacagtgccaaaggaggggaagatcgtggatgccaaa
acaatcttcacaggccacactgctgttgtggaggacgtctcctggcacctgctccatgaa
tctctctttggatcagtggcagatgaccagaaactcatgatctgggacacacggtcgaac
aacacctccaaaccgagccatgcggtggacgcccacactgctgaagtcaactgcttgtct
ttcaacccttacagcgagttcattctggccaccggctctgctgacaagactgtggctctt
tgggacctgaggaacctgaagctgaaactccactcttttgaatctcataaggacgagatc
ttccaggttcagtggtctccccataacgaaacgatccttgcctccagcggcaccgacagg
cgactcaacgtctgggacctgagtaagatcggagaggagcagtcgccagaggatgctgag
gatggtcctcccgagctgctgttcatccatggcggacacacggctaagatctctgacttt
tcctggaaccccaacgagccgtgggtcatatgttcagtgtcggaggacaacatcatgcaa
gtgtggcagatggctgagaacatctacaatgatgaggacccagagggagctgcagactcg
gaggtccaggcatga
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integrated database retrieval system
