Cyprinodon variegatus (sheepshead minnow): 107094395
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Entry
107094395 CDS
T06110
Name
(RefSeq) atherin-like
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107094395
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
107094395
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
107094395
NCBI-ProteinID:
XP_015245452
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRYGSDPNRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKCRKRSDLDGGADAARNKPDHPNNNGDSAHSFTDPEEEPPDPR
GGTSTSSRNKKLQQPSCCFSGGATTSCAVGSGCEEEKASAPREEGLGRPGAGGCPGADTE
EDGGKKSDLSGAETCSDSRAQTQRQTESKLPLTGGSNKAAHRHANSELRDKLTALSERSH
RGGAGGAGGSSAATRGHVKPLGLKEILGYLSSQEQLSEEKLTRGKVKAVMEREVERGRLR
RTRCGNITLPLRGMENPTADRLVGRSALQDERAAAKTPPPAPLEDEAMETCEKEEEEQGG
HEEEKEEDDDDDPRSSDEDGGLSPVAMTTEAGLAENNREDVGFERELKEESPQQQRQDGE
AACSSAMSELDLPLETQSPPPDGASWSECNGAHPEEAAFTSDHLSYTQRDEINLTASSFS
NVEYKTEVGASSCMLTPTASPRDSSLPEERGINHSSGGHMNLDSTRVSPVFWTVSDVVSY
ITAVGFPEQAAAFRTQEIDGKALLLMQRNDVLTGLSIKLGPALKIYERHIKVLQKTHFED
DFC
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaacaagtaccgtgagtggatcctggaaactatcgactccctccgctcg
aggaaagcccgtccggatctggaaaggatttgtcgaatggttcggaggcgctacgggtct
gacccaaaccgaaccaggacggagctggaaaaactcatccaggagcagacggtgctcaaa
gttagctacaagggatccatctcctaccgaaacgcggctaaggtgcagaggaaatgcaga
aagaggagcgacttggacggaggcgcagatgcggcgcggaacaaacccgatcatccgaac
aacaacggcgacagcgcgcacagcttcaccgacccggaggaggagccgccggatccccgc
ggcggaacatccaccagcagccgcaacaaaaagctccagcagccttcctgctgcttcagc
ggtggcgcaacaacgagctgcgctgtcgggagcggctgcgaggaggagaaagcaagtgca
ccgagagaggagggattaggacggccgggagcggggggctgccccggagcagacactgag
gaggacggggggaagaagtccgatctgtccggagctgaaacttgctccgacagccgagct
cagacccagaggcagaccgagtccaaacttccactcacaggagggagcaacaaagcagcg
caccgccacgccaactcagagctgcgcgacaaactgacggctctgtccgagagaagccac
cgaggaggagcaggaggagcagggggctcctccgccgcgaccagaggccacgtgaagccg
ctgggcttaaaggagatcctgggctacctgagcagccaggagcagctgtcggaggaaaaa
ctgacccgaggcaaagtcaaagcggtgatggagagagaggtggagaggggcaggctgcgc
aggacgcgctgcgggaacatcactctccctctgcgggggatggagaatccaaccgctgac
agacttgttgggagaagcgcactgcaggacgagcgcgcagcggcgaagactccacctcca
gcccctctggaggacgaggccatggaaacctgtgagaaggaagaggaggaacagggagga
catgaggaagagaaagaggaggatgatgatgatgatcccaggagttctgatgaggatgga
ggactttccccggtagccatgacaaccgaagctggacttgctgagaacaacagagaagat
gtgggctttgagagagagctgaaggaggagagcccccagcagcagaggcaggatggagaa
gctgcttgctcctcagcgatgtctgagcttgaccttcctctagagacccagtctccacct
cctgacggagcctcctggtctgagtgtaacggcgcacacccggaagaggcagctttcact
tccgatcatttaagttatacacagcgtgatgaaataaacctcaccgcctcaagcttcagc
aacgtggagtataaaacagaggttggcgcttcgtcctgcatgctcacaccaactgcctct
cccagggactccagcctccctgaagagcgaggaataaaccacagcagtggagggcatatg
aatttggacagcaccagagtaagccctgtattctggaccgtgtctgatgtggtcagttat
atcacagctgtgggtttccctgagcaggcagctgccttcaggacccaggaaattgatggg
aaggctctcctcctgatgcaacgcaacgatgttcttactgggctgtcaatcaaacttgga
cctgccctcaagatctacgagcgccacataaaggttctgcagaaaacacactttgaggac
gatttctgctaa
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