Cyprinodon variegatus (sheepshead minnow): 107094621
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Entry
107094621 CDS
T06110
Name
(RefSeq) ras and Rab interactor 2-like isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107094621
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107094621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_2
RA_3
Lpg0393_VPS9
Motif
Other DBs
NCBI-GeneID:
107094621
NCBI-ProteinID:
XP_015245846
Ensembl:
ENSCVAG00000002311
UniProt:
A0A3Q2C9D0
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MDSSTPSESPFCGLTNRSSSFFKLVDTFALEIGELKKEMVQTAPALDKDPVELEGLQGGA
YLQPPHCSGLVGEWDSGYDSLRRRMSVLDRLTETHQVWLLLAVSEDEASSILLKQPPGVF
LVRKSAVLQKKVLSVRLDEDHSESPISHFNIRESQYAFSIEGSGISFADLFHLVAFYCVS
RDILPFTLKLPEAISSAKTQKELEEVAQLGAGFWDSALCSRRRASPAVCRRLSRTLGPQQ
AKRTGDVEESRQRHLGVHSDSAPPTLQPHTPPPSSFQDSSRSIAAPLCFVNPLFLQTHPR
SPQVHRPPQSEPEKAADSEQLSSEPDVDQTKLNCKARPSPPPRPPPPRSMPSRRPAPPPP
GPPAPISRTKSMPVPVAPRQQTSTRRPAPAPPTVGTRTSSPTKSTTSPNRPPPRPKQPDL
EALRCHIALDDETIARALSRANLPSCQPAPATEEPSQNLTESLPESGERGRQRLSDMSIS
TSSSDSLEYSRSPGFSLDLAPSPSQHPAEDSSEDDEDVEEDDEDYGVGMEADLESRLRPI
LKARRRRVGVSLGGGSFVLPRSLKGRFSKVGGMFSSLMTPEKRAVKRIAELSRDKSSYFG
SLVQNYISFVQENRSCHTSGMDFLQTVRQFMTQMKAYLRQSSELDPPLESLIPEDQIDRV
LEKAMHKCVLKPLKSDIEVILHDFQVNSGALQQLRENLALAKNKKPQELGVDGAVPPDSM
AIEKIRQKFLNMRKMYSPDQKVSLLLRVCKLIYTIMQDNSGRMYGADDFLPMLTYVVAQC
DMPQLDTEVQYMMELLDPTLLQGEGGYYLTSAYGAMALIKNFQEEQAAQILSSEARNTLH
QWHRRRTAQRSVPSVDDFQNFLRVALQEVGSGCTAKTLQVQPYSTAEEVCSLCAFKFKVP
DPENYALFLITEDMSQQLAPDTHPQQIKAELHSRPLAQVFHFVYRKVDNLNLCSQADISN
GNCLQVE
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggactccagcacgccatcagaaagccccttctgtggcctcaccaacaggagcagcagc
tttttcaagctggttgacacctttgctctggagatcggggagctgaagaaggagatggtg
cagacggctccagctttggacaaggatcctgtggagttagaagggctgcagggtggtgcc
tacctgcagcccccccactgcagtgggctggtgggtgagtgggattctggttatgactcc
ctgcggagaaggatgagcgtgttggaccggctgactgaaactcatcaggtgtggctgctg
cttgcggtcagtgaagacgaggcgtcctccattctgctcaaacagcctccaggggtgttt
ctggtaagaaagtcggcggttctgcagaagaaggttctgtctgtgcgtttggatgaggat
cactcagaaagtcccatcagccacttcaacatccgagagagtcagtacgccttttcaatc
gaaggatctgggatcagctttgcagatctgttccaccttgtggctttctactgtgtaagc
agagacatcctgccattcacgctcaaacttcctgaggccatttcatctgcaaagacccag
aaggagctggaggaggtggctcaactcggcgcaggcttctgggactctgccctgtgcagc
cggcgacgtgcctcccccgcagtctgtcgccgtctgagccggaccctcggcccccagcag
gctaaaaggacgggtgacgtggaggaatcccgccagagacatctgggtgtccacagcgac
agtgcgcctcctaccttacagccccacacacctccaccttcctcctttcaggacagcagt
cgctccatcgcggcccccctctgctttgtgaaccccctgttcctacagactcacccccgg
agccctcaggtccaccgtccccctcagtccgaaccagagaaagctgcggattcagagcag
ctgagcagtgagccggacgtggaccagaccaagctgaactgtaaagcgcgcccttctcct
cctcctcgcccccctcctccccgttcaatgccaagccgccggcccgctccgcctccaccc
gggcctccggcaccgatttcaagaaccaagagcatgccggtacctgtggcccccaggcag
cagacctccaccaggcgcccagctccagctccacctacagtgggtaccagaaccagcagc
ccaaccaaaagtacgacttcaccgaaccgaccgcctcctcgacccaaacagcctgatctg
gaagctctgcggtgccacatagccctagatgatgagaccattgcaagggctttgtcccga
gccaacctcccatcctgccagccggcacctgctaccgaggaaccgtcacagaacctcaca
gagagtctgcctgaatccggtgagagggggcgtcagcgcctcagtgacatgagcatctca
acgtcgtcctcagactccctggaatattcccgctctcccgggttctccctggacctggcc
cccagcccgtctcagcacccggcagaggacagcagcgaggacgacgaggacgtggaggag
gacgacgaggactacggtgtcggaatggaagcagatctggagtcgcgtcttcgtcccatc
cttaaagctcggaggcggagggtcggcgtgagtttgggcggcgggtccttcgtcctgccc
cgctccctgaaggggcgcttcagcaaagtgggagggatgtttagctccctgatgaccccg
gagaaacgggccgtcaaacggattgcagagctttcccgggacaagagctcgtacttcggc
tcattggttcagaactacatcagctttgttcaggagaaccggagctgccacacttctggg
atggacttcctgcagactgtgcggcagtttatgacccagatgaaggcttacctgcggcag
agctccgagctggaccctccgctagagtcgctcataccagaggaccagattgaccgggtt
cttgagaaggccatgcacaaatgtgtcctgaagcctttgaagagcgacattgaggtgatt
ctgcatgattttcaggtgaacagcggagctctgcagcagctcagggaaaacctggccctg
gctaaaaacaagaagccccaagagctgggggtggacggagccgtgccccccgactctatg
gccatcgagaaaattcgccagaagttcctgaacatgaggaagatgtactcccccgaccag
aaggtgtccctgctgctacgagtctgcaaactcatctacaccatcatgcaggataattca
gggaggatgtacggcgccgatgacttcctgcccatgctgacctatgtagtcgctcagtgc
gacatgccgcagctggacacagaggttcagtacatgatggagctgctggacccgactctg
ctgcagggggaaggtggttactacctgaccagcgcttacggcgccatggccctcatcaag
aacttccaggaggagcaggcggcccaaattctgagctctgaggccaggaacaccctgcac
cagtggcaccgccggcgaacggcgcagcgctccgtgccctctgtggacgactttcagaac
tttctccgggtcgctctgcaggaggtgggctcaggctgcacggctaaaaccctgcaggtt
cagccgtacagcacagcggaggaggtctgctccctctgcgcctttaagttcaaggtaccg
gaccctgagaactacgccctgttcctgatcaccgaggacatgagccagcagctcgctcca
gacacccacccccagcagatcaaagcagagctgcacagccggccccttgcgcaggtcttc
cacttcgtctacaggaaggtggacaacctcaacctctgcagccaggctgacatcagcaat
gggaactgcctgcaggtggaatag
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