Cyprinodon variegatus (sheepshead minnow): 107094669
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Entry
107094669 CDS
T06110
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107094669 (rtf1)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107094669 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
107094669
NCBI-ProteinID:
XP_015245929
Ensembl:
ENSCVAG00000022224
UniProt:
A0A3Q2EI86
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MVNVKKRKRVIDSDSEDSGSDDNLDQELLSLAKGKRVDSGEQDETVNKPAASTDSETSDS
DDEWTVGGTKGKKKVKPGKGSEKKSASKKKVNKATASGSSDGDSSADSSAPEEGEVSDSE
SNSSSSSSDSDSSEDEVFKDGYDDDLMGDAEDRARLEQMTEKEREQELFNRIEKREVLRR
RFEIKKKLKDAKKKEKEEKKKKQEEEQEKRKQSQVQDTQVVSMSHNKERRSKRDEKLDKK
SQAMEELKAEREKKKNKTAELLAKREPLKTSEVYSDDEEEEEEDDDKSSVKSDRSSRSSS
FDDDEKEETPPKSQPVSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSK
PVYRVAEIVDVVETAKVYQLGSTRTNKGLQLRHGGDTRVFRLEFVSNQEFTENEFMKWKE
AMIVAGMQVPTLDEITKKEQSIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLL
KDKAMAEESGDGERVKTIQDQLNELEERAEALDRQRTKNISAISYINQRNRSWNIVESEK
ALVAEGQNSKNQQMDPFTRRQCKPTMVSNARDPSVHAAILAHLNQKYGSGSGGADPASAD
KNKVGQVNPKDKDVPKPTTDLSEDLFKVHDFDVKIDLQVPNAEAKSLSVSSNALPVKDGA
PRRSLNLEDYKKRRGLI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgttaagaaacggaaacgagtaattgactccgactctgaagatagcggtagc
gatgacaatttagatcaggagttgttgtcccttgccaagggtaagagggttgattcgggc
gagcaggatgagactgtgaacaaaccagcagcctccacagactctgagacatccgacagc
gacgatgagtggaccgttggtggcaccaagggcaagaagaaggttaagccggggaagggt
tctgaaaagaagagcgcttcgaaaaagaaagttaacaaggcgacggcatctggcagctct
gatggcgacagctcagcggacagctctgctccagaggagggagaggtgtcagattcagaa
agtaacagctcgtcgtctagctcagactctgactcctcagaggatgaggtgtttaaagac
ggttatgatgacgacttgatgggtgatgctgaggacagagcgcgtctggaacagatgact
gagaaggagagggagcaagagctgttcaacagaattgagaagagagaggtgctaagaaga
cggtttgaaattaaaaagaagctgaaagatgcaaagaaaaaagagaaagaggagaagaag
aagaagcaggaggaagagcaagaaaagaggaaacaatctcaggttcaagacactcaggtg
gtgtctatgtcacacaataaggaacggcgatccaaacgtgatgaaaaactggacaaaaag
tcccaagccatggaagaactaaaagctgaacgtgaaaagaaaaaaaataaaacagctgaa
ctgctggctaaaagagagcccctcaaaacaagtgaagtctattcagatgatgaggaagaa
gaagaggaagatgacgataaatcatctgttaaaagcgaccgaagctcacgttcatcgtct
tttgacgacgatgaaaaagaggagactcctccaaaatcacagcctgtttcgctccctgaa
gagctcaacagggtccgtctttccagacacaaactggagcgctggtgccacatgcccttc
ttcgccaagacagtgacaggctgctttgtcagaatagggattgggaacagcagcagtaaa
ccagtttatagggttgctgaaatcgtggatgtagtagaaacagcaaaggtttatcaactt
ggatcaacgcggacaaacaagggattacagttaaggcatgggggtgacacacgagtgttc
agacttgagtttgtatcaaatcaagagttcacagaaaatgaatttatgaaatggaaggag
gcgatgattgtcgctgggatgcaggtaccaactctggatgaaatcaccaagaaggaacag
tccatcaaagaagcgctgaattataagtttaatgataaggacattgaggatatcgttaag
gagaaggacagattccgaaaagcaccgcctaattatgcaatgaagaaaacacaactactt
aaagacaaggctatggcagaagaaagtggtgatggagagagagtaaaaactatccaggat
cagctgaatgagctggaggagagggctgaggcactggacagacagaggaccaagaatatt
tcagccatcagctacattaatcagaggaacagaagctggaacattgttgaatctgagaaa
gcacttgtggctgaaggccagaattccaaaaatcaacaaatggaccccttcacacgaaga
cagtgcaaaccaaccatggtgtcaaatgccagagatccgtcggtccatgcagctattctc
gctcacctgaaccagaagtatggctcagggtcagggggtgcagatcctgctagtgcagac
aagaacaaagtgggccaagtaaaccctaaagacaaagatgtccccaagccaaccactgac
ctctcagaagacctgtttaaagttcatgattttgatgttaagattgacctacaggttcct
aacgcagaagcgaaatctctctcagtgagctccaacgccctgcccgtgaaggacggagct
ccccgtcggtcacttaacctggaagactacaagaagaggaggggcctgatctga
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