Cyprinodon variegatus (sheepshead minnow): 107094723
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Entry
107094723 CDS
T06110
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107094723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107094723
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107094723
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107094723
NCBI-ProteinID:
XP_015246002
Ensembl:
ENSCVAG00000019872
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MGVCVSLPEPVMADQPLSQQANQALKKSHKGGLPNGKEALQARGQWASKAEFLLAVAGQI
IGLGNVWRFPYLCYKNGGGVFFVPYLLFLVLCGIPLFLLETSLGQYTSLGGVSAWRTICP
LFGGLGYASQVMILHGCVYYIVILAWALYYLFHSFQAELPWSHCNNTWNTDACFLFDKYN
LSANMSSLPENATSPVMEFWEREVLRLSSTLDELGPISWKLALCLAVVWLVCYFCVWKGV
KSTGKVVYLTATFPYVMLFVLLVRGATLPGATQGIVYYLKPNITRLADPQVWMDAGTQIF
FSYGICLGSLTALGSYNKYNNDCYKDSFMLCLLNSATSFLAGFAIFSVLGFMAEEQGVDI
GTVAQSGPGLAFIAYPRAVAMMPVPQLWAVCFFLMIIMLGLDTQFVSLEALMTSVTDLYP
HVIRRGYRRELLLLFVCVVCFLVGLVMVTPGGLYVFQIYDHFSCSGASLLLLSIFQSLAI
GWVYGADRFSANIKDMTGYTPISAFKLCWKYLTPAVCTATFIFSLVCWSPLSLGKGLVAP
VWATTLGWILTLSSVSLLPIWAVYALLTTPGTLPQRFHRLCSPAEKSSTGFQHLSTNGSA
LTYSPVLPLNGKPKEQILELLQEKKT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtgtgtgtccctgccagagccggtgatggccgaccagccgctttcacaacag
gccaaccaggcgctgaaaaagtcccacaaaggaggcctccccaacgggaaagaagccctg
caggcccgaggccagtgggccagcaaggccgagttcctcctggctgtggctggacagatc
attgggctcggcaacgtctggaggtttccctacctctgctacaaaaacggaggaggcgtg
ttctttgttccctacctgctgttcttggtgctgtgtggcatccccctgttcctcctggag
acctctctggggcagtacaccagcctgggaggcgtcagcgcctggaggactatttgccca
ttattcggaggtctcgggtatgctagccaggtgatgatcctgcatggctgtgtttactac
atagtcatcctggcctgggctctctattatctgttccacagcttccaggcggagctgccc
tggtcgcactgcaacaacacctggaacacggatgcgtgcttcttgtttgataaatacaac
ctgtcggcaaacatgagcagtttgcctgagaacgccacctccccggttatggagttctgg
gagcgggaggtgctccgcctgtccagcactttagatgagctgggtccaatcagctggaag
ctggctctgtgtctggctgtcgtctggctcgtctgctacttctgtgtttggaagggggtg
aagtctactggaaaggttgtgtacctgacggccaccttcccatacgtcatgctgtttgtg
ctgctggtgcgcggcgccaccctgccgggagcaactcagggcatcgtttactacctcaaa
cccaacatcacccgcctggctgaccctcaggtatggatggatgcaggtactcaaatattt
ttctcttatgggatctgcttgggaagtctcacagccctgggcagttacaacaaatacaac
aatgactgctataaggactccttcatgctctgcctcctgaacagcgccaccagtttcttg
gcaggtttcgccatcttctcagttcttggcttcatggctgaggagcagggtgtagacata
ggcactgtggctcaatcagggcctggtcttgccttcatcgcctaccccagagcagtcgcc
atgatgcctgttcctcagctctgggctgtctgcttcttcctcatgatcatcatgctggga
ctcgacacgcagtttgtgagtctagaggctctcatgacctcggtgactgacctgtatcct
cacgtgatccggcgaggataccgcagagagttgctgctgctgtttgtgtgtgtggtttgc
ttcctggtcgggctggtcatggtcacaccaggtggcctctacgtgttccagatctatgat
cacttctcatgcagtggagccagcctgctgcttctctccatcttccagtctctggccatc
ggctgggtctacggagccgatcgattcagtgccaacatcaaagatatgacgggctacacc
cccatttctgccttcaagctgtgctggaagtatctgactcctgctgtgtgcactgcaacc
tttattttctccttggtgtgttggtctccgctcagcctggggaaaggcctcgtcgcccca
gtctgggccaccaccctgggctggattctgaccctttcgtccgtttccctgctccccatc
tgggctgtctatgctctcctcaccactcctggaacccttccccagcgcttccatcgcctt
tgcagccctgctgaaaagtcctctacgggcttccagcacctctccaccaacggctcagca
ttaacctacagtcctgtgctgcctctcaacgggaagccaaaagaacaaatcctagaactc
ctccaggaaaagaagacatga
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