Cyprinodon variegatus (sheepshead minnow): 107094768
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Entry
107094768 CDS
T06110
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04260
Cardiac muscle contraction
cvg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107094768
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107094768
04261 Adrenergic signaling in cardiomyocytes
107094768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107094768
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107094768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
NPP
VWA_CoxE
dCache_2
WAK_assoc
Motif
Other DBs
NCBI-GeneID:
107094768
NCBI-ProteinID:
XP_015246088
Ensembl:
ENSCVAG00000018764
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MEGICGIQILHTFLLLWTSIDWNVAPVAGSQQGIPLSVVKLWASAFGGEIKSISAKYSGS
QLLQKELWSITAPRAGANSSSEPSPPIRTTSRMNPKITAACLWEESEASRKTRKYGESVQ
TAFRKRLQAQNPGFSCPEKYKEPEKSVRVEEIDGVKLVKNLAVKMEEMFQRKAEATRRLV
EAAEEAHHQHEENPDLQYEYFNAVLINEVDEEGNNVELGGEFILEPNDHFNNLSVNLSLS
VVQVPTNMYNKDPDIVNGVYWSEALNKVFVENFERDPTLIWQYFGSAKGFFRQYPGVKWH
PDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDD
FFNIIAYNQEIHYVEPCLNGTLVRADTTNKDHFREHLDKLFAKGIGLLGEALTEAFTILN
DFNQTGRGSVCSQAIMLVTDGATKMYDDVFEKYNWPDRKVRIFPYLIGRESAFADNLKWM
ACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYADSALSHAHKLNDK
SGPTLTTTVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYAFAITNN
GYILTHPDLRPLYQEGQRRRKPYYSSVDLSEVEWEDKDDILRNAMVNRRTGTFSMEVKRT
VDRGRRVLKMHNDYYYTDIKGTPFSVGVALSKGHGKYFFRGNVSMDAGLRDLEQPDVALA
DEWTYCNTEEKHEHRHLTQIQAIKLFMTGRRPHLKCDRELIQEVLFDAVVTAPLKSYWNS
LALNKSENPEKGVEIAFLGTRTGLSRTNLFVPKDQLSNQDFLTAEDKEGVFNADHFPLWY
KRAAEQVPGTFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLEYFQRKF
WTACRQCTALDGKCIISCDSEDINCYLIDNNGFILVTEEQSQTGLFFGEVEGAVMNKLLQ
MGSFKRITLYDYQALCREYAGSSDSARTLSDPFSLVKWLLTELVIFLLEFNLYSWWNVDF
SVKAQRIRGKTMMVPCDTVYPAFVSERTIKETTGNIDCGGCVRSFVIQQIPSSNLFMVVV
ENKCDCSIIPPVTMDPIEIMYNESLKCDRLKLQKDRKKPESCHPFHPEENAMECGSACRF
SSSLALPLMPLIAATISR
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatctgcgggatccagatcttgcacacattccttctgctctggacctccatc
gactggaatgtggcaccagtggcggggtcccagcaagggattcctctctcagtcgtaaag
ctttgggcctctgcttttgggggagaaattaaatcaatttctgcaaaatattctggatcc
cagcttttacaaaaggagctgtggtccattacagcaccacgagctggagccaactcctct
tctgagcccagtcccccaattaggaccaccagcagaatgaaccccaagatcacagctgct
tgtctttgggaggaaagcgaagcatctcgaaaaactcgaaagtatggagaaagtgtccaa
acagcatttagaaaacgtcttcaagctcaaaacccaggattctcctgccctgagaaatat
aaagagcctgaaaagtcggtcagagtggaggagattgatggtgtgaagctggttaaaaac
ctggctgtaaagatggaggaaatgttccagaggaaagcggaagccaccaggcggctggtg
gaggctgcggaagaagcgcatcatcagcatgaagaaaacccagacctgcagtatgagtac
ttcaatgctgtgctgatcaatgaggtggacgaggagggcaacaacgtggagcttggagga
gagttcatcctagagccaaatgaccatttcaacaacctttcagtcaacctgagcctcagt
gtggtgcaggtgcccaccaacatgtacaacaaagacccagatatcgtcaatggggtttac
tggtccgaggccttgaacaaagtctttgtggaaaactttgaaagagatccaacactgatc
tggcagtactttggaagtgcgaaaggcttcttcaggcagtaccctggagtaaagtggcac
ccggatgagcacggtgtcattggctttgactgcaggaatcggaagtggtacatccaggca
gctacgtctccaaaagatgtggtgatcttagtagatgttagtgggagcatgaagggcctt
aggctgaccattgccaggcagacggtttcctccattttagacacactgggagatgatgac
ttctttaacatcattgcttacaatcaggagatccactatgtagagccttgtttgaatggt
acgctggtccgggctgacacaaccaacaaagatcatttccgtgaacatctggataagttg
tttgccaaaggaatcgggctgctgggcgaagctctgaccgaggccttcacaatcctgaat
gattttaatcagacaggacgaggcagcgtgtgcagtcaggccatcatgctcgtgacggat
ggagcaacaaagatgtacgatgatgtttttgagaagtacaactggccagacagaaaagtg
cgaatattcccctacctgattggacgggagtctgcatttgcagataatctgaaatggatg
gcttgtgccaacaaagggtattttagtcagatctccactctagcggatgtgcaggagaac
gtgatgaggtatcttcatgtcatgagccgtccaaaggttattgatcatgaacacgataca
gtgtggaccgaagcgtacgcagacagtgctctttcccatgctcataagctcaacgataaa
tcaggcccaactctgacgactacggtcgcgatgccagtcttcagcacaaagaatgaaacg
aaaaaccagggtattctgttgggggttgctggcacagacatccctctacaggagctgatg
aagctcatcccaaaacatatgctagggatccatggatatgcatttgcaattaccaataat
ggctacatcctgacacatccggacctcaggcctttgtatcaggaaggacaaaggaggaga
aagccctattacagcagtgtagatctctctgaggtggagtgggaagacaaggatgacatt
ctacgcaatgctatggtgaacaggaggacagggactttctctatggaggtgaaaaggaca
gttgaccgagggaggcgggtccttaagatgcataatgattattactacactgacatcaaa
ggaactccattcagtgttggagtagcactctcgaaaggtcacgggaagtatttcttcagg
ggaaacgtatcgatggatgcagggctccgtgatctagaacaaccagatgttgccctggca
gatgaatggacctactgcaacacagaggagaagcatgagcaccggcacttgacccagatt
caagccataaagctcttcatgactggccggagaccccacctcaaatgtgaccgagagttg
atacaggaggtgcttttcgacgctgtagtcacagctccactgaagagctattggaacagt
ctggctctcaacaaatcagaaaacccagagaaaggagtggagattgctttcctgggtacc
cggactggtctgtcacgaaccaacctgtttgtacccaaagatcagctttccaaccaagat
ttcctgacagccgaggacaaggagggtgtgtttaatgctgatcacttccccctgtggtac
aagagagcggcagagcaggtcccaggaacatttgtctattccatccccttcagcacagct
ttggaaaataagagtgtggtgttggccagcactgctattcagctcctcgatgacaggaag
tctccaattgttgctgctgtggggatccaaatgaaactagagtactttcagaggaagttc
tggactgcttgtagacagtgcacagctctggatggaaaatgcatcattagttgtgatagt
gaagacataaactgctacctcattgacaacaatggctttattcttgttacagaggaacaa
tctcagacagggcttttctttggagaggtggagggtgctgtcatgaacaaacttctccaa
atggggtctttcaaaagaatcactctgtatgattaccaggccctttgtagggagtatgct
gggagcagcgacagcgcacgcactttatcagatcctttttcacttgtgaagtggctcctg
acagaacttgtcattttcctgctagaattcaatctgtatagctggtggaatgtggacttc
tcagtgaaagcacagagaattcgtggtaagactatgatggtgccatgtgatacagtttac
ccagcctttgtctctgaacgcaccattaaggaaaccacaggcaacattgactgcggaggt
tgtgttaggtcttttgtcatacaacagattcccagcagcaacttgttcatggttgtggtt
gaaaacaagtgtgactgcagcatcattcctcctgtaacaatggatcccattgagattatg
tacaacgagtctctaaaatgtgacagactcaagctccagaaagatagaaaaaagccggag
tcatgtcatccttttcaccctgaggaaaatgccatggagtgtggttcagcctgtcgcttc
tccagttccttggcactacctctgatgcctttgattgcagcaactatcagcaggtga
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