Cyprinodon variegatus (sheepshead minnow): 107094817
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Entry
107094817 CDS
T06110
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107094817 (trip11)
Membrane trafficking [BR:
cvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
107094817 (trip11)
Retrieval pathways
107094817 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
Motif
Other DBs
NCBI-GeneID:
107094817
NCBI-ProteinID:
XP_015246159
Ensembl:
ENSCVAG00000022126
UniProt:
A0A3Q2DI51
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGNVGGSLSSFTGQISNFTKDMLLEGVEEVGDATTELHVSNSKLA
ELEAAFAAQKSEYDRLKKLHSELEEKLEASEIQIKQQSAEYRTLLQQKDVEISHLKVRQT
SLQEEVQKLQQSAQSASSSAAVLPVTTSSLTATSSSPSTFLTRHTGSHHGFQGDEVDLSD
VLWSQQEINRLSTEVMRLEAEVAHWRRISQTSTTTGAGNGDQGEILKLQRTIKELRDEMS
REVDEHQHELAAIQDAQRQKLAEITRRHREELSEYEERIEELEEQIQSGGGHVSSLSDSS
KLQELQKEIRSLQEAAEQREKQLAELSASLEDARTKQTSLQQERDEAQEENADLLQNYSR
LQASVTELQTRVQEQEGKALQKNQYEHEIQNLRNNLEAAEKEIERLKNISEDEPKEEVAD
ILELNTIIGTLRQEKEALEQEKLNLQHSLKLAEEQTVGRNASLMESDEAESLEHLKVELE
RREKILRATEEERDTLMSELEELDRQNQEATQHFITAKEQLSGQLKEAEAELIRTTAELN
TTKDLKRALEQELETQKEKMSQSAFTLNDLHMSKQQLEQTAKELRDALGRAQEQSREARR
EVAELKKSLQEREEELAAAEAERHVAGGQSEAERVKEELEGKERELSDLRKEMGEMRSVY
EKGKSEEYELKMEKRRMKEEQEKALEKVEELNRQLKENQTSLNRMVKEKDTRIEALKLEK
NQLEVELSQAERTLSEQVRQYQQTIEELTRARSLDASALQTEHETAIKLNQEKDLEIAKL
RRDMDQLASDHRDTNEMLSITVAGQKQLTDLLQEKDAFVETLKQNAADLQKEMENRESVM
CKEVEILKQAMEEKDKQLGGMKEENSHLKEEIDRLKDQQSRPQPLAEPKTLDIITELEAE
ITQLKSSRNGLEEELRSLKRSLEEQQVSMQTLQSELEQAHSRHQQTALNYDRLIHAKDEE
ITRLQQSLDLLSEGHLPAFQGQVILQEEKTQSLNQENGNEKHDLSKVEIEKLVRGIKEKE
TEISQLNEKNLSLTRQLDQLVVSHNEVGKLSQLIQQKDLEIQALHARVTTGHNQDVIYLQ
QQLQAFAVEREQMLAVLNEKTRENSQLRSDYHRLMDIVAAKEAALAKLQQENQRLSNMSD
PSGSQEMFKETIQNLSRIIREKDIEIDALTQKCQTLVTVLQSTGGEPGAASGGVSSNQFE
ELLQERDMLKQQVKKMEEWKQQVITTVKNMQHESAQLHEELIALQSQVSADSDCSSKLSV
DYARLIQSYEQKEKRLGGLSLELAQVQQTISQLSTTKDVLLGKLDSVVQTPEAAATQSSS
RSLTAEAQTQQNVSPINDNLRRDAEALQAQLAEKENLIRTLQENNHRLSNAASNSESEQK
SQAEEVRQIRERLESLQRSVREKDLLIKTKGDQFSQVSEALRNRENDNEVLKQAVTNLKE
RALILEMDAKKLKEENEAVAARSREKESEFRALQETNMRVSLLLREKEFELSAISEKAAT
VERMLKDKELGKSGELNQLLNELKSMQEKAVMFQQERDQMMMALKQKQMESTALQSELQH
TREKEQRLNLELERLRNHLLEIEDSYTREALAAEDRETELRRRVALLDEKLATSSNAVEN
ASQQASMQVESLQEQLSNAVKQRDDTLAQLRTSQEQVRQYAVSLSNLQMVLEQFQQEEKA
MYSAELEKHKKEKDEWRRKALLLEDQASALQVNLDEANAALDSASRLTDQIDQKEEQIEE
LKKQVEVRQEMLEEAQKKLMNLLNSTEGKIDKVLMRNLFLGYFHTPKTKRADVLRLMGSV
LGLSREQVDQMLEDDGRHGVTGWVSSWLGGRGAQSVPNTPQRPTSGQGLNSSFSEMFVKF
LEMESTPSLPAPRLPVHDIKHLNAPPPGRSGGSTSGSTGATAGLRRAGESNPFLAPRSAA
VPLVAGSGSAGSGHLLMKPISDALPTFTPVPVSAEASAGAVLKDLLNQ
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctggctgggtggactaggctctggcctcggccagtccctgggaaatgtcggt
gggagtctgtcatcgttcaccgggcagatatcaaactttaccaaagatatgcttctggaa
ggagtggaagaagtcggtgacgctacaacagaattacacgtgtccaattccaagttggct
gagctggaggctgcattcgctgctcaaaaatctgagtatgacaggttgaaaaaacttcac
tcagagctggaggagaagctggaggcatcagagatccagattaaacagcagtctgctgaa
tacagaaccctgctgcaacagaaagatgtggaaatcagccacctcaaagtacgacaaact
agcctccaagaagaagtccagaagctgcagcagtctgcgcagtctgcctcctcgtcagcg
gccgtgctgccagtgaccacatcttccctaactgctacctcctcgtctccttccaccttc
ctgacacgtcacacagggtctcatcatggcttccaaggcgacgaagtggacctcagtgat
gttctgtggtcgcagcaagaaatcaacaggctgtccacagaagtcatgcgtctagaggcg
gaggtagcacattggaggagaatatcgcagacatcaaccacaacaggagctggtaatggc
gaccagggagagattctcaaactacagaggactattaaggagttacgagatgaaatgagt
cgagaggtggatgagcatcagcatgagcttgcagccatacaggatgcccagcgacagaag
ttggcagaaattacacggcgccatagagaggagctctcagagtatgaggagaggatcgaa
gaactggaggagcagatacagagcgggggcggtcacgtcagttccctgtcagattcctcc
aaactacaggagctccagaaggaaattcggtccctccaggaagcagctgaacaacgtgag
aagcagctggccgagctatcagccagtctggaggatgcacggacgaaacagacctctctg
cagcaggaaagggatgaagcccaggaggagaacgcagacctgctgcagaactactcgcgg
ctgcaggcttcagtaactgaactccagacacgagtacaggagcaggaggggaaggctctg
caaaaaaaccaatatgagcatgagatccaaaacttaagaaataacttagaagctgcagaa
aaggagatagagagactgaagaacatttcagaggatgagccaaaggaagaggttgcggac
atcttggagttaaataccattattgggacgttaaggcaagagaaggaagctctggaacaa
gaaaagcttaacctgcagcacagcctgaaactagcagaggagcagacggttggccgtaat
gcatcgttgatggagtctgatgaggcagagtctctagagcatctgaaggtagagctggag
aggagagagaagatcctgagagcaaccgaggaggaacgcgacaccctgatgtctgagctg
gaggagttggaccgacagaaccaagaagctacacagcatttcatcacagcgaaggagcag
ctctctggacagttgaaggaagcggaggcagagctgatcagaacaactgcagagctcaac
accaccaaggacctgaaaagagcactagagcaggagctggagacccagaaagagaaaatg
agccaaagcgcgttcacccttaatgacctccacatgagcaaacaacagctggaacagacg
gcgaaggagctgagagatgcactgggacgtgcacaggagcagagtcgggaagcacgcaga
gaagtggctgagctgaagaagagtctgcaggagcgagaggaggagttagctgctgctgaa
gcagagaggcatgtagcgggtggacagagcgaggctgagagagtcaaggaagagctggaa
gggaaggagagggagctatcagatctcaggaaagaaatgggagaaatgaggagcgtctat
gaaaaggggaagtctgaggagtacgagctgaagatggagaagaggaggatgaaggaggag
caggagaaggctttagagaaggtagaagaactaaacaggcagctgaaagaaaaccagacg
tctcttaacaggatggtgaaggagaaggatactcgtattgaagctttgaagctggagaag
aatcagcttgaagttgagctgtcccaggcagagagaacactatcagagcaggtcagacag
taccagcagaccatagaggaactgacccgagcccgatccctggacgcctcagctctgcag
accgagcacgagactgcaatcaaactaaaccaggagaaagatctggagatcgccaagctg
aggagagacatggaccagctggcgtcagaccatagagacactaacgagatgctgtcaatc
acagtcgcagggcagaagcagctgacggacctgctccaggagaaggacgcctttgtggaa
accttgaagcaaaacgctgcagatttacagaaggagatggagaacagggaatctgtcatg
tgcaaagaggtagaaatcctcaaacaagcgatggaggaaaaggataaacagctgggtggg
atgaaggaggagaacagccatttgaaagaggagattgatcgactgaaggatcaacagagc
agacctcagcctctggctgaacccaaaacactggatatcattacagagctggaggcggag
atcacccagctgaaatcctccaggaatggtttggaggaagagcttcggtccctcaaaaga
tcgttggaggagcagcaggtctctatgcagacgctgcagagcgagcttgaacaggcccac
agccgccatcagcagaccgctctcaactatgaccgactcattcatgccaaagatgaagaa
ataacccgcctccagcaaagtttggatctgctcagtgagggtcaccttccagctttccag
ggacaagttatcctccaggaggaaaagacgcaatctctaaaccaggagaacggcaatgag
aagcacgacctgtccaaggttgagatagagaaactggttcgtggcatcaaggagaaagag
actgagatcagccagctgaatgagaagaacctgtcactcaccaggcagctggatcagctg
gtggtctctcacaacgaagttggcaaactctctcaattgatccaacagaaagatctggaa
atccaggcgcttcacgctcgggtcacgacgggacacaaccaggacgtaatttatttacaa
cagcagctgcaggcgttcgccgtggagagagagcagatgttagctgttcttaatgagaag
accagagagaacagccagctccggtccgactaccaccgcctcatggacatcgtggccgcg
aaggaagccgctttggcgaagcttcagcaggagaatcagcgcctctccaacatgagcgat
ccctctggaagccaagaaatgttcaaggagacaatccaaaacctgtctcgaattatcagg
gagaaggacatcgaaattgatgctctgactcagaagtgtcaaaccttagtgaccgtcttg
cagtctacaggaggcgagccaggcgctgcatctgggggggtcagcagcaaccagtttgag
gagctgctccaggaaagggacatgctgaagcagcaggtgaagaagatggaggagtggaag
cagcaggtgattacaacggtcaagaacatgcagcacgagtccgcacagctgcacgaagag
ctgatcgcgctgcagagccaggtctctgccgacagcgactgtagctccaagctgtctgtg
gactacgctcgtttgatccaaagctatgagcagaaggagaagaggctgggaggtctgagc
cttgaacttgcacaggtccagcagaccatcagtcagctcagcaccaccaaggacgttctg
ctgggtaaactggatagcgttgtgcagacccctgaggcggcggccacccagtcgagcagt
cgctctctaacagccgaggcccaaacacaacagaatgtctctcctataaacgacaacctg
cggagagatgctgaagctctgcaagcacaactggcagagaaagaaaacctgataaggaca
cttcaggaaaacaaccaccggctctccaacgcagcgtccaactcggagagcgaacagaag
agccaggcggaggaggttcgtcagatccgagagagactggagtccctgcagaggtccgtt
agggagaaagacctgctcataaaaaccaaaggagaccagttcagccaagtgagtgaagcg
ttgcgcaaccgtgaaaacgacaacgaggtgttaaagcaggccgtgaccaacctgaaggag
cgtgccctcatcttggaaatggatgcgaaaaagctgaaggaagagaacgaggcggtggct
gctcgctctcgagaaaaggagtctgagtttagagctctacaggaaacaaacatgcgagtt
tctcttctgctcagagagaaggagtttgaactaagtgcaataagcgagaaggcggccacg
gtggagaggatgctgaaggacaaagagctgggtaaatctggggagctgaaccaactcctg
aatgagctgaagtccatgcaggagaaagcggtgatgttccagcaggagagagatcaaatg
atgatggcacttaagcagaagcaaatggaaagcacggcacttcagtctgagttgcagcat
accagggaaaaagagcaacgcctcaacctggagctggaacggctgcggaaccacctgttg
gagattgaagattcgtacacaagagaagcccttgctgcagaggaccgagagacagagctg
cgccggcgggtggcactgctggatgagaaattggccacatcctcaaatgctgtggaaaat
gccagccaacaggccagcatgcaggtagagtcgctacaggaacagctgagcaatgcggtg
aagcagagagacgacacactcgcacaacttagaacctctcaggaacaagtccgacagtac
gcagtatcgctctccaacctgcagatggtgctagagcaattccaacaagaggagaaagcc
atgtactctgcagaacttgagaagcacaaaaaggagaaggatgagtggagaagaaaagct
ctcctgctggaagaccaagcgtctgcccttcaggtaaacttagatgaagccaacgctgct
ctagattcagcatctcgtctcacggatcagatcgatcagaaagaagagcaaattgaggag
ctaaagaaacaagtggaagtgaggcaggagatgttggaggaggcacaaaagaaactcatg
aaccttctgaacagcacagaaggaaagatagacaaggttctgatgcgcaacctgtttttg
ggctacttccacacacccaaaacgaagcgggccgacgtgcttaggctcatgggaagtgtg
ctgggactgagccgagaacaagtcgatcagatgttggaggacgacggacgccacggggtt
actggttgggtatcaagctggctgggaggcagaggagcgcaaagtgtcccaaatactcca
caaaggccgaccagtgggcagggcctgaattcttcgttctctgagatgtttgtaaagttc
ttggagatggagtcgaccccgtcccttccggcgccaaggcttccggtccatgacatcaag
catctaaacgccccgcctcccgggagaagcggtggctctacttcaggcagcacaggagct
acggctggtttgaggcgagctggtgaatccaatcctttcctggctcctcgttccgctgcg
gtgccgttggtggctggttccggctctgctggctcaggccacctgttgatgaagcccatc
agcgacgctctgcccaccttcacccctgtgcctgtctcagctgaggccagtgctggagct
gtgctcaaagacttactaaatcagtga
DBGET
integrated database retrieval system
