Cyprinodon variegatus (sheepshead minnow): 107094825
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Entry
107094825 CDS
T06110
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107094825 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107094825 (aaas)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107094825 (aaas)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
PD40
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
107094825
NCBI-ProteinID:
XP_015246165
Ensembl:
ENSCVAG00000015868
UniProt:
A0A3Q2D4Y8
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MCSLALFPPPLPAGQSTLCESNNELLSGANSSDDRQDSSLLSLYFPRESLKLHSRTESSS
KAAFLDHSETLWMRSAAAWRDGGFTGLLNEITTSHAEVPKWLSVTSGCILALLRWVSSFH
GSLYPHVTLSSEDLIAEFSQVLNWPDCVVRAFAWHPHADKFAVALLDDSIKIYNPQSAIS
PTLKHRLQRNVAAVQWKPLCASGLAVACQNCLLVWNVDPCSLSTRPSSGCAQVLSHPGHS
PVTSIAWSPSGSLLVSASPLDTAMMVWDVAVESCVPLQRVGGGGVTFLSWSPAGSHILAS
TPSALFRVWETRMWTCERWPCVKGRCQSGCWSPDGSRLLFAVQGEMVIYALTFSGSPGVP
TSMAKGPQTAVVVADLSETTFNSPDGDIIVGGEIQSLSWDPRGERLAVLLKGDPQAANRP
AIIAVFKTRANPIFELLPCGFVQGEPGAEPRLMQFHPHFQHGALLTVCWSSGKITHIPFY
FLSSGVSHVGLSGSPPKLQPQERPADFANQSLFTELLS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcgctggctctgtttcctcctccgctgcccgctggacagtccaccttatgcgaa
tctaacaacgagctgctttctggagccaacagctccgatgacagacaggactcaagtctt
ttgagtctgtatttccccagagagtccctgaagctgcacagccgcacagagagcagcagc
aaagctgccttcctggaccactcggaaactctatggatgaggagcgctgcggcctggcgg
gatggtggcttcacagggctgctcaatgaaatcaccacctcacatgcagaggtgccaaag
tggttgtcagtgacgtctggatgtattctggctctgctccgatgggtctcctcatttcat
ggctccttgtatcctcatgtcacactaagcagtgaggacctgattgctgagttttcgcag
gtgcttaactggcctgattgtgtggtgcgagccttcgcttggcatccccacgctgataaa
tttgctgtcgccttgttggacgactccatcaagatctacaaccctcaaagtgccatatct
cccacactgaagcaccgtctgcaaaggaacgttgcggccgtacagtggaagcctctgtgt
gcgtcggggctggcggtggcgtgtcagaactgtttgctggtttggaacgttgatccctgc
tcactctcaacaaggccttcttccggctgtgctcaagttttgtcccaccctggtcattct
ccagtcacatccattgcctggtctcccagtgggtccctcctggtgtctgcctcccccctg
gacacggccatgatggtttgggatgtcgctgtagagagctgtgttccccttcaacgggtt
ggaggagggggggtcaccttcctgtcctggtcccctgctggcagtcacatcctggcctcc
actccatcagccttgttcagggtgtgggagaccaggatgtggacctgtgagcgttggcct
tgtgtcaaaggtcgctgccagtccggttgttggagtccagatggaagtcggcttctgttc
gcagttcaaggagaaatggtcatctacgctctgaccttctctggatcaccaggtgttcct
acaagcatggccaaagggccacagactgcagttgttgtggctgacctatcagagacgact
ttcaacagtccggatggagacatcattgttggtggagagattcagtctttgtcctgggat
ccaagaggagagcgactcgctgtgcttctgaaaggtgatcctcaagcagcaaaccgtcca
gcaatcattgcggtcttcaaaacaagagccaaccccatctttgagctgctgccttgtgga
tttgttcaaggtgaaccaggagcagaaccaagactgatgcagtttcacccacatttccag
catggggctctgctcactgtgtgttggtccagtggaaaaattactcacatccctttctac
ttcctgagctctggcgtttcccacgtcggcctcagcgggagtccaccaaagcttcagcca
caggaaaggcctgctgactttgctaaccagtccctcttcacagaactgctctcctga
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