Cyprinodon variegatus (sheepshead minnow): 107094877
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Entry
107094877 CDS
T06110
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04517
IgSF CAM signaling
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107094877 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107094877 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107094877 (sptbn4)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107094877 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
107094877 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_4
TMP_3
SOS1_NGEF_PH
Helical_needle
Motif
Other DBs
NCBI-GeneID:
107094877
NCBI-ProteinID:
XP_015246242
Ensembl:
ENSCVAG00000014226
LinkDB
All DBs
Position
Unknown
AA seq
2692 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTADNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNVA
ENHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIETE
SIVNRYDALASDLLDWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
IELSSEMEKEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEETQAQLLSKDFGKHLLEVDDLLQKHSLQEADISVQAERVEMLNAAALKFTTIEGYQ
PCDPQVICNRVNHVSTCVEELKQLAAKRRAELEESRQLWAFFQELEESEAWIREKSSILA
SQGYGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKQGKQILSEKSFGTTGIQERIMEV
KDVWKRLEDQAAQHLNHLQEALNFFQFSTETDDLAAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTEAIDKHRLHVVALRKHMMVLPLQYQEQEEVQVRLGDVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLEKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSAEVRGCQDHLNSRWNSIVELVEQKKDQLNSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEYL
ATAHPSRTMEILVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEGAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERIDTLASRGNKNRE
LAQRWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKEGKQLIKEKPELSPVVRKKLEEIRDCWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLECQLSYVDQGQDLTTVNKQLKKLHTMESQMEQWYKEVGQLQVQ
AASIPQQTQIQGTVVERQSAVETRMARLIEPLKERRRLLLASKDVHQVGRDLEDEILWVQ
ERLPLAMSQEHGSSLQAVQQLMKKNQTLQRELEGHRSRIEDVLERAGIIASIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLLLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVSVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCKEILAQIEDKHRRLPEVRARQGSTSNTSTLQRLLQSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMLCWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARSQSTLECIEMGKMLLAAR
NPAAEEIKEKLEKVISKQRELLEKWDKHWEVLQQLLEVHQFAQEAMVAEAWLTAQEPLIN
SKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDASSVPTTLPRLPVSPVMRQTIYEQNEASSPPSPSPATPTPSPSAAARRLGSTV
ANYTPVMNGSSYRHTLEARHGGVVGVAAGLGQPAPSSIASVATAAMLVSANQMRESTSTA
KDQATKTMSYLQPGQAGKELEVKSLPYLRQPKIKHLDDAVTPLIVASRLERGRERGRERE
RGGGMATERAEVAVMAEVVLQEPGRERLHSEPTRGPRGSRTDPLGHAEPQVQTYQRQLSS
EQLIQARRDELPQEVWREQAERRRTLERQTSSEQEGHDGRRRERDRHRGERQESSDDMGR
EQSDRRSTGGEKRTTMAEIVEQLQEREAAQARGEVPRLPNGIPEKSSRLDRPRARDRPKP
RRRPRPKEPGETTRRSRSAPAQSSQTAPQPPTHTAHHEGFLFRKLDIESMKKSTNSRSWV
NLYCVLNKGELGFYKDAKNTTTSYNNEPLLNLSHCHCDVTNGYKKKKNVFTLKTKDGSEF
LFHAKDEEDLKAWVNNITASISEHEEIAKWGQPQPTTSSTDEGTRRDGSKVDNRSDRGGE
RSDRGDRIERADKEKEREKEKEKERERGERSEKSERAGKSDGKRSEKSSKKK
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctctccagacctggacaatgcagaagctcagcgccagctcaataacaac
aaccgaccaatcagctctgggttctgggagactgagtgtacaagctccaaattgtttgag
tgttcccgcatcaaggctctggcagatgaaagagatgcagtgcagaaaaaaaccttcaca
aagtgggtcaactcccacctagccagagtgtcctgtcgaatatctgacctctacaacgac
ctgagggatggctatatgctcaccagactgctggaggttcttagtggggagctcctgccg
agaccgactaggggtcgtatgcggatccactgcctggaaaatgtcgacaaagcgttgcag
ttcctgaaggagcagagggttcatttagaaaatgttggttcccatgacatagtagatgga
aaccatcgcctcacgctgggccttatctggactatcatcctccgttttcagatccaggtg
atcaaaataaacactgcagacaacagagaaacccgctcggccaaagacgctctgctgctt
tggtgccagatgaagactgcaggataccctgaggtgaacattcagaatttcaccacctgc
tggagagatggcctcgccttcaacgccctcatacacagacacagacctgacctaatagag
ttccataagctgacgcgctccaatgcaacccacaacctgcagcaagcctttaacgtcgcc
gagaaccacctgggtcttaccaaactcctggaccctgaggatgtgaacacagagaaccca
gatgaaaagtccatcattacgtatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggaggggaagagggttggcaaggtattggacaactgcatcgagacggaa
tcgatcgtgaaccgatatgacgctctggcctcagacctgctggactggatagagaagacc
attgccattatcagcaaccagaaatttgccaactcgctgactggagttcagcagcagctg
caggctttcacaacctactgcactatagagaagcccatcaagtttcaggagaaaggaaat
cttgaggtccttctgttcaccatccaaagcaaactcagagccaataaccagaaaccctac
gtgcctcatgacgggaagctgatctcagacataaacaaggcctgggagagactggagaag
gcggagcatgagagaggcgtagctctacgcaaagagctgattcgtcaggagaagctggag
cttttggctcagcgttttgaccacaaaacaaccatgaggcaagcgtggctcaacgagaac
cagagactcgtgtcgcaggataattttggctacgatctgcctgcagtcgaggctgcgatg
aagaaacacgaggccatcgaggcggacatagcctcgtacgaagaaaggatcggagtggtt
attgagctctcctcagagatggaaaaggaaggatactacgacatccgacgcatcctggca
cgcaaggagaacatcctgggccagtggagtctcctaaaggagctggtggctggaaggagg
acccgtctggagaagaacctggctttgcagaagacgtttcaggacatggtctacatgatc
gactggatggaggaaacgcaggctcagctgctgtcaaaggactttggaaaacatcttctg
gaggtagacgacttgctgcagaagcacagcctgcaggaagctgatatttcagtgcaggct
gagagagtggagatgctcaatgctgctgccctcaaattcaccacaatagaaggctaccag
ccatgtgacccacaggtgatctgtaaccgtgtgaaccatgtctctacctgtgtggaagaa
ctgaaacagctggcggctaaacggcgggctgagcttgaggagtcgagacagctgtgggcc
ttttttcaggagctggaggagtcggaggcctggattcgggagaaaagctccatcctggcc
tctcagggatatgggaaagatctgagcagtgtgctgaggttacttcagaaacacaagact
ctagccggggagctgctggctcatcgctctctgctgcagaacaccataaaacaaggaaag
cagattctaagtgagaagagctttggcaccactgggatccaggagcgcatcatggaggta
aaagacgtgtggaaaaggctggaggaccaggctgcgcagcatctcaaccacttgcaggaa
gcgctcaatttcttccagttctccacggagacagacgacctggcggcctggctgcaggac
gcctaccgtcttgtctccagcgaggactttggtcacgatgagtactccactcagtctttg
ctgaagaaacacaaaggggtcacagaggcgatcgataaacacagactacatgtcgttgcg
ctgcggaaacacatgatggtgctgcctttgcaataccaagaacaggaggaggtgcaggtg
cgtttgggcgacgtggagcagctgtataccgaggttgctgaagttgccgtgctccggcag
caatggcttcacgatgcgctggctgtgtaccgcatgttcagcgaggtcaatgcctgtgag
ctctggatcgatgagaaggagcagtggctggagaagatggaaatccctgaaaagctggag
gacgtggaagtggtggcacacaggtttgaaagcttggaccaggagatgaacagcctgatg
ggacggatcctggatgttaatcagatagtacagcagctcctggatggaggtcatccttct
tctgcggaggttagaggttgtcaggatcatctcaactccaggtggaacagcatcgtagag
ctggtggagcagaagaaagaccagctgaactcaatgttacggctgcagaattacctactg
gagtgtgctgagatcaaatcccagatccaggacaagaggaaagccattgatgccacacag
tacatgggcagcgatttgggaggggtccttgctctgcagagacgcctttctaccatggag
ggagccctgtctgtcttggagcccaaactgctacatctacaggaggaagcagagtatctg
gccactgctcatccaagtcgaaccatggaaatccttgtgccgttcgatggcatcagcgtg
gaatgggaggagcttaagaggaccctgcagggatgtgaagactcactgatggtggctagc
aggctccagagcttcatacaggatctggactccttcctaacctggctggtccagacccag
acggctgctgcgtctgatcaacttcccaatgatttggaagaggcagagaaactcatcaac
aaacatgctgctctcaaagaggagatcggacggtatgaggaagactatgagcgtctccaa
gccatgaatgagcttctagagtcagaagatgcacctctgcctcaggcggccctgcagcag
tggctccagaagcttgatgttggctggaacaagctcctcgaaatgtgggagagcaggagg
gaagttctggtccaagctcatatttttcacctgttcctacgagatgtcaaacaagcagag
tccttcttaaacaaccaggaatcggctctcgctcacgtggagcttcccaccaccgtagaa
acagtcgaaggtgctataaagaaacacaaggactttaccaccactatggagctgaacctg
cacaggatcaaagctgtgattgaggcaggagaaagcctgatcagtcagaacaacatctac
tccgagcgcatcagggaacgtatcgacaccctcgccagcaggggaaacaagaacagggag
cttgcccagcggtggctggaaaaactgaatgaccaatgggaacttcaaagatttctccaa
gactgtcatgagctgggggactgggtgtacgagaagatgctgatggcgagggacagcagt
cgcgacgagacccaaaagcttcataagaaatggcagaagcaccaggcttttatggccgag
ctggcccagaacaaggaatggctggataagatcgaaaaggaaggcaagcagctgattaag
gagaagccggagctgagccccgtggtccggaagaagctggaggagatcagggattgctgg
ctagatttggagagcaccacccaggccaaagcccgccagctcttcgaggccaacaaggcg
gacctgctggtgcagagttatgaaagcctcgaccagaggctgggccagctggagtgtcag
ctgtcctacgtggaccagggacaggacctcaccaccgtcaacaaacagctcaagaaactc
cataccatggagtcccagatggagcagtggtataaggaggtgggtcagctgcaggttcag
gcggcttccatcccgcagcagacacagatacaaggcacggtggtggagcgacaatccgct
gtagagaccaggatggcccgactgatcgagccattgaaggagagacggaggcttcttctg
gcatctaaggacgttcatcaagtcgggcgagacctggaggatgagattttatgggtccag
gagcgcctccctctggccatgtcccaggaacacggctcatcgcttcaagccgtccagcag
ctcatgaagaagaaccagacacttcaaagagagctggagggacacaggagcagaatcgaa
gatgtcctggagagggcagggatcattgcctccattaggagcccagaagctgattgcgtc
agagcaggtcatgaccagcttgcccagctgtgggctctgctgtgggctgagacagagagg
aggcagctggtcctggacgccatgtatcaagcccagcagtattacttcgacacagctgag
gtggaggcctggttaagcgagcaggagctgcacatgatgaatgaggagaagggaaaggat
gagccgagcacgctgcagttgctgaagaaacatttgctcctggagcaaaccatcgaggac
tacgctgagaccatcggcctgctgtcacagcagtgtcgacagctgctggagatgggacat
ccagacagcgaacagatcagcaagcgtcagtcgcaaatagaccgactgtacgtgtccctg
aaggacctggtggaggagagaaagagccgcctggagcagcagtactggctgtatcagctc
aacagggaggtggacgagctggagcagtggatcgcccagagggaagtggtcgccagctcg
ccagaactgggccaagactttgagcatgtctccgtcctccaagaaaagtttacagagttt
gcctcagagacgggaagtgtggggcaggaacgtgtgacggccgtcaaccagatggtggac
gagcttatagactacggtcactctgaggccgccaccatcgctgaatggaaggacggggtt
aatgaagcctgggccgacctgctggagctgatggagaccagagcgcagatgctcgctgcg
tcacaccagctgcataagttcttctcagactgcaaagagattttggctcagatagaagac
aagcaccgcagactaccagaagttcgggctcggcaggggagcacctccaacaccagcacc
ctgcagagactcctgcaaagcttcgaacaggacatccagctgctggtcactcaggtgcgt
cagctgcaggagagtgcggcccagctgagaacggtgtatgcaggagagaaggccgaagcc
atcgcctgtcgggagcacgaagtgatgctgtgctggaaggagctgttgacatcatgcgaa
gagtgtcgactgcagatcaccacggagacggacaagctgaggttcttcagcatggtccgg
gatcagatcatgtggatggagtcaatcatctgccagataggcacaggagaaaagccaagg
gatgtgtcatcggtggaggtgctgatgaattatcaccaaagccttaagagcgaagtggag
gcccgcagccagagcaccctggagtgtatcgaaatgggaaaaatgctgctggctgctaga
aaccctgctgccgaggagatcaaagaaaagctggaaaaggtgatttccaagcagcgggag
cttttggagaagtgggacaagcactgggaggttctacagcaattgttggaggtccatcag
tttgcccaggaggcgatggtggcggaggcctggctgaccgctcaggagccgctgatcaat
agcaaggagctgggagggagcgtggacgaggtggagcagctcatacgtcgacatgaagcc
tttaggaaagcagccgccacctgggaggagagattcagctccctgcgacgcctcactacg
gtggaaaagctgaaagcagaacagagcaaattgcccccaacaccccttctggggcgtaaa
gtcttcctggacccacaagatgcatcatctgttccaacaaccctcccccgccttccagtc
tcccccgtcatgagacagaccatctatgagcagaatgaggccagctctcctccatctcct
tcgcctgccaccccaacgccctccccatcagctgcggctcgccggctggggtccacggtc
gccaactacacccccgtgatgaacggatccagctacagacacaccctggaggcgcggcac
ggtggagtggtgggtgtggcagctggactaggtcagccagctccctcgtcgattgcatct
gttgccacggcggcaatgttggtgtcggcaaatcagatgcgagaaagtaccagcactgca
aaagatcaggccaccaaaaccatgagttacttacagccggggcaggcgggaaaggagctt
gaggtgaaatccttgccgtatctacggcaacccaaaatcaaacacttggacgatgctgtg
acgcctttgattgtggctagccgactggagagaggcagagagaggggtagagaacgggaa
agaggggggggaatggcaacagagcgagcagaggtggcggtgatggctgaggtggtgctc
caggagccgggtcgagagcgtctgcacagcgagcccacccgggggccacggggatccagg
accgaccccctgggtcacgcagaaccccaggtccagacgtatcagcggcagctctccagt
gagcagctgatccaggcacgcagagatgagctacctcaggaggtgtggagagaacaagca
gagaggaggcggacgctggagaggcaaacctccagtgagcaggagggccatgacggccgg
cggagagaaagggaccggcaccgaggggagagacaggagtccagtgacgacatgggcaga
gaacaatcagacaggcgctctacaggaggagagaagagaaccaccatggcagagatagta
gagcagcttcaagaaagagaagcagcacaggctcgtggcgaggttccccgcctgcccaac
ggtataccagaaaagtcttcccgtcttgaccggcccagagccagggacagacccaaacca
agacgaaggcctcgtcccaaagagccaggagagacaacgcggaggtccagatctgctcca
gctcagagcagccagacggccccccaaccaccaacccatacagcacaccatgagggcttc
cttttccgcaagctggacatcgagagcatgaagaaaagcaccaatagcaggtcttgggtc
aacctttactgcgtgctgaacaaaggggagctgggtttctacaaggatgccaagaacact
accacgtcctacaacaacgagcccctgctcaacctctcccactgccactgcgacgtcacc
aacggctacaagaagaagaagaacgtcttcactctgaaaacgaaggatggcagtgaattt
ttgtttcatgcaaaggatgaggaggacctcaaagcatgggtgaacaacatcaccgccagt
atttcagagcacgaggagattgccaaatggggtcagccccaaccaactacctcatccaca
gacgaagggacacggcgagacggcagcaaagtggacaacaggtcggatagaggcggcgag
cgctccgatcgtggagaccggatagagcgggcggacaaggaaaaggaaagggaaaaggag
aaagagaaggagagggagagaggagagcggtcggagaaatcagaacgggcgggaaagtcg
gacggaaaacgctccgagaagtcaagcaagaagaaatga
DBGET
integrated database retrieval system
