Cyprinodon variegatus (sheepshead minnow): 107094938
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Entry
107094938 CDS
T06110
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
cvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107094938 (pnn)
03015 mRNA surveillance pathway
107094938 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107094938 (pnn)
03041 Spliceosome [BR:
cvg03041
]
107094938 (pnn)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107094938 (pnn)
Spliceosome [BR:
cvg03041
]
Complex C
Other components
EJC/TREX
107094938 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
107094938
NCBI-ProteinID:
XP_015246347
Ensembl:
ENSCVAG00000003133
UniProt:
A0A3Q2CB64
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQLRRLSGPMAGLGGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDVRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSSEKLKRRSEIEQK
LEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWNCHNNHLVKYIRTK
TRPHIFYRPGKMCSATQKLLEESTKKLNGIFEERREAFAEHLSKMEARPRRQQNREQDGS
SASRMDRPAEGKPAGQIEKRTGKRGESRRDEEEEEDEEDEEEKDKEGDGKEMGGREGEEK
EEGEEGLNKMEEVEEEAMEVSEEGSKEMGEEEQKEKGRKESSPESEENEVEEKEDGGRQE
EIEIDRKQESTEIQEEKTPDVQSSKAAVSSQKTPDRSDLPSESLAPQEPAEQSPVTEAAP
KTQEPQRASITPNQDVASPVQENSELQSSLQESTVERKSEENEVLQKLPDSKETPVPAPT
KEADQVRGRKKEKEVRKRRSRSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSSN
SSSRSRDGGKRKRRPSDRSRDKKKEERGQQKSGRGDSKRRRSEEKKGRPSRSDREQKDRD
RKDKRR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtgcggagcttgcaggaccagctcgaaaaagccaaagaaagcttgaaa
aatgtggacgataatattcgtaaactgactggacgggaccccaatgagtcacgaccgggt
cagctccgtcggctcagcggccccatggcaggcctaggaggaggtagaggcagaggaatc
aatctcctcagacgcagtctctctgatatgggaagtggtggcccccctgccaaacaaagg
gacatcgagggagctctgctgaggctggcaggtgatcagagggccaggagagacgtgcgt
cacgatagtgacgccgaggatgatgacgatgtcaaaaaaccggcgttgcagtcgtctgtt
gtagctacctctaaagagagaacacgccgggacctcatccaggaccaaaccatggatgag
aagggcaaacagaggaaccggcgcatgtttggcctactcatggggacgctgcagaaattc
aaacaagaatcgaacgtctcttctgagaagctaaagcgacgttcagagattgagcagaag
ctcgaggttcaagctgaggctgagaggaaaaaggttgagaatgaaaagagagaactgttt
gaggaaaggagagccaagcagacagagctgagactgctggaacagaaagtagaattagct
cagctgcaagaggagtggaactgccataataatcatttggtgaaatatatccgcactaaa
accaggcctcatatattctaccggcctgggaagatgtgttccgccacgcagaaactcctc
gaagaatccaccaagaaacttaatggtatctttgaggaaaggcgcgaggcgtttgccgag
catttgagtaagatggaggcacgtccccggcgacagcagaatcgcgaacaggatggcagc
tcagcctcaaggatggaccgcccggcggagggtaagccagcaggtcagatagagaagcgg
acaggtaaaaggggggagtctaggagggatgaagaggaagaagaggatgaggaagatgag
gaggaaaaggataaggaaggtgatggaaaggaaatgggagggagagagggtgaagagaag
gaggaaggagaagaggggttaaataaaatggaagaagtggaggaggaagcaatggaggtt
agtgaggagggaagcaaggagatgggtgaggaggagcagaaggagaaggggagaaaggaa
tcaagtccagagtctgaggagaatgaggtagaagagaaggaagatggggggcggcaggaa
gagatagaaatagacaggaagcaggagtccacagagatccaagaggaaaagactccagat
gttcagagctctaaagcagctgtaagcagccaaaagaccccggacagaagtgatctgccc
tctgagagcctcgctccccaggaaccagcagagcagtcccctgtgacggaggctgcccct
aaaacccaagaaccccaaagggcctccatcacccctaatcaggatgtagccagccccgtg
caggagaacagcgagttgcagtccagccttcaggagtccacagtggagagaaaatcggag
gagaacgaggtcctccaaaagctgcccgattccaaggagaccccggtacctgctccgaca
aaggaggccgaccaagtcagagggagaaagaaggaaaaagaagtgaggaaacgtcgcagc
cgtagcaacagttcctcctcctcttcatctgggtcatcctccagtggtagctcatcttca
tcctcaggatccagcagatcctcgtcttcatcgtcatcctcctcctcctcatcgtccaac
agcagcagccggagccgtgacggcggcaagcgaaagaggaggccgtcggatagaagcaga
gacaagaagaaagaggagagaggtcaacaaaagtcaggaagaggagactcaaagaggagg
aggagcgaggaaaagaagggcaggccttctcggagtgatagggagcaaaaagatagagac
aggaaggacaagagacgctga
DBGET
integrated database retrieval system
