Cyprinodon variegatus (sheepshead minnow): 107094998
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Entry
107094998 CDS
T06110
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107094998 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107094998 (rbm22)
Spliceosome [BR:
cvg03041
]
Complex B
Other components
Prp19-related factors
107094998 (rbm22)
Complex C
107094998 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
107094998
NCBI-ProteinID:
XP_015246430
Ensembl:
ENSCVAG00000010670
UniProt:
A0A3Q2CT20
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANTDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLMRASTMPRLDPPEDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKDGAKDGVSEMGTPLDPVPGLPGALPPPPSLDEEAPANYFNLDPSSSSAI
MNIALPPPPGINPPPPGYGPPMFHPMGHMAPPVPPPMTMRPPGTIHYPSQDPQRMGAHSA
HGSRPTE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccctgggctctaatacttacaacagacagaactgggaagacgcggacttt
ccaattttgtgtcagacatgtttaggagaaaatccctacatccgtatgaccaaggagaag
tatggaaaagagtgcaagatctgtgctcgcccctttactgtgttcagatggtgcccagga
acacggatgcgttttaaaaagactgaggtctgtcagacctgcagtaaaatgaagaacgtt
tgtcagacatgccttctggacctggagtacggtttgcctatccaggtcagagacaccggc
ctgtctgttaaagacgaggttcctagatctgatgtgaacaaagagtattacacacagaac
atggaaagagagatagccaatactgatggcactcgacccgtaggccagctcggtaaagct
ccaagctccagtgacatgttgcttaaattggcccgaacaacaccatattataaaaggaac
cgacctcacatctgctccttctgggtgaagggggagtgtaagaggggagaagaatgcccc
tacaggcatgagaagccaacagatcctgatgaccctctggccgaccagaacattaaagat
cgttattacggcattaatgaccctgttgctaacaagttgctgatgcgagcctcgacgatg
ccccgcctggaccccccagaggacaagtccatcagcactctttacatcggagggctggga
gacacagtaacagatggagatctcaagagtcacttttatcaatttggagaaattcgtacc
atcactatagtccaaagacagcagtgtgccttcatccaatttgccactcggcaggcagca
gagatggctgcagaaaagtcctttaacaaactaatcattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagctagaggaaaggatggcgcgaaggatggagtgagtgag
atgggtactccactggatcctgtgcctgggctgccaggagcactgcctccaccaccatct
ctggatgaggaggctcctgctaactactttaacctagaccccagctcctcgtctgccatc
atgaacattgctttgccgccccctccaggcataaacccccctccaccaggttacggcccg
cccatgtttcaccccatgggtcacatggccccacctgtgccccctcctatgacaatgaga
cccccaggtacaatccattatccatcccaggatccccagcgcatgggagcccattcggca
cacggctcacgtcccaccgagtag
DBGET
integrated database retrieval system
