Cyprinodon variegatus (sheepshead minnow): 107095057
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Entry
107095057 CDS
T06110
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3 isoform X1
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107095057 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107095057 (taf3)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107095057 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
PHD
RNA_pol_Rpc4
PHD_2
Motif
Other DBs
NCBI-GeneID:
107095057
NCBI-ProteinID:
XP_015246512
Ensembl:
ENSCVAG00000009106
UniProt:
A0A3Q2CPQ7
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MCENYARSLLRVSVAQICQALGWDAVQLTACDLLSDVLHRYIQQLAKVCHRYSELYGRTD
PVLDDLSQAFRLMGVNLNELEDYVNNLEPVAFTHQTPIFPVSKNNVLQFPQPGVRDAEER
KDYIPEYMPLLVSLQEAEEEEEEVPPDMGTSAEAMQVALEEEEDEMDEDEMVNDENHPLK
RDLESPDAALGMMASKRPRMYPGLSPEWGVEPREPLSSLNSQRVPPGILPSHESLDALSP
ETPPGVLPPFRPQPAVPKHSDQKGLTTPVRKPKVSSPGRQRTKSPKGGIAVPVGGSPIHS
PKPPKERKKSPGRTKSPKSPKSPKLSALKAPPPQIKAESLHKLPLPALSERMGKDNVHLR
PAAEDLQFPEGSFKKLEPDNTAIEDSIAAVIARACAEREPDPFAFSSGSDSDSNGFSSPR
RLTIMEPSTPKGPPGAGPFIKDTSTPLHPHAHTGLGNWTLDDSINEVVRRANQGGPSAAA
APPLPLPPAIPAGYVSSGSASPPTPEPLLKVFEKSKIIPPPDVKKKLKKELKTKMKKKEK
PKEKDREKDKSKVKEKNKEKNKAKKMEFPKEMNIPFHKEFGGKEEDLFMPRDFTLPEGSI
KIKSRDGDGSKKDKEKHKDKKKDKEKSKKDKDKKEKNKDRNKEDKQKQSALSTFSLGDIP
PLFSPSTCLRMPPMLPSLAPILHEKEAKSKEKEKKKDKKEKKKKKDKDKEREKAKEKERE
KEEKRKEKEKEKEKREKEREKEKEKIRMEKVKMETPAVPPSPVIPRLTLRVGAGQDKIVI
SKVVPNSEPKPAGTKAPAAKMGPGSRPRTPPLPPVLPPVVPTLPPPSPLPPAPPPPSSLH
PPPSMMPPSAKTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWY
HWPCVGILTPPPEDQPWFCVKCSSKKKDKKHKKKKHKPH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagaactatgcccgctcgctgctgcgtgtttcggtggcgcagatctgccaggct
ctgggctgggatgcggtgcagctcactgcctgcgatctgctgtccgatgtgctgcacagg
tacatccagcagctggcaaaggtttgccatcgctactctgagctgtatggaagaacagac
ccggttctggacgatctcagccaggccttcagactgatgggggtcaacctgaatgaactg
gaggactacgtcaacaacctggagccggtggccttcacccatcagacacccatctttcct
gtcagcaagaacaacgtcctgcagtttccccagcctggagtaagagatgcagaagaaaga
aaggattatattccagaatatatgccgctcctggtctccttacaggaagcagaagaggag
gaggaggaggtgcctcctgacatgggcacctcggctgaggcgatgcaggtggccttggag
gaagaggaggatgaaatggatgaagatgagatggtgaacgacgagaaccacccactgaag
agggacctggaaagtccggacgcggctctgggcatgatggcctccaagaggccgcgcatg
taccctggactgagcccagagtggggggtggaacccagggagcctctttcttctcttaac
tcccagcgtgtcccgcctggcatcctgccgtcccacgaaagcctggacgccctgtccccg
gaaacgccgccgggagtcctgcctcctttcaggcctcagccggcggtaccgaagcactcg
gatcagaaggggctgaccaccccggttaggaagcctaaagtctcatctcctgggaggcaa
cggactaagtccccgaagggggggattgcagttccggtcgggggcagtcccatacattct
cccaaaccaccgaaggagcggaaaaaatccccgggccggaccaagagtccgaaaagcccg
aagagtccgaagctgagcgcccttaaagcacccccccctcagatcaaagcggaaagtctg
cacaagctgccgctgcctgcgctgagcgaaaggatggggaaggacaacgtccacctgcgc
ccggccgcagaggacctgcagttccccgaaggatccttcaagaagctggagccggataac
accgccatcgaagactccatcgccgccgtgatcgctagggcttgcgccgagcgcgaaccc
gatcccttcgccttctcatctggctctgattccgacagcaacggcttctccagccccagg
aggctgaccatcatggagccgtccacgccgaagggcccccccggcgccgggccgtttata
aaggacacttcaacaccacttcacccacacgcgcatacaggtctgggaaactggaccctg
gacgactcgatcaacgaggtggtgcgcagagccaaccagggcggcccttccgccgccgcc
gctcctcctctgccgctgccgcctgccatcccagccgggtacgtatcgtcgggatcagcc
tcgccgcctacccccgagccgttgctcaaggtgtttgagaagagcaagattattccacct
cccgacgtgaagaagaagctgaagaaggagcttaaaaccaagatgaagaagaaggagaag
ccgaaggagaaagatcgggaaaaagacaaaagcaaagtcaaggagaagaacaaggagaaa
aacaaggccaaaaaaatggagttccccaaggagatgaatattccttttcacaaggagttt
ggagggaaggaggaagacctcttcatgccgcgagacttcactctgccagagggctccatc
aagatcaaatcacgagacggggatggctccaaaaaggacaaggagaagcacaaagacaag
aagaaggacaaagagaaaagcaagaaggacaaagacaagaaggagaagaacaaggacagg
aacaaggaggacaagcagaaacagtcggctctgtccaccttttcgctcggcgacatcccg
ccgctcttcagcccatccacctgcctgcggatgcctcccatgctgccgtctctggctccc
atcctccacgagaaggaggcgaagagcaaggagaaggagaagaagaaagacaagaaggag
aagaagaagaagaaagacaaggacaaggagcgggagaaggcaaaggagaaagagagggag
aaggaggagaaaaggaaggagaaggagaaagaaaaggagaaacgggagaaggagagagaa
aaggagaaggagaaaatccggatggagaaggtaaagatggagactccagccgtccctccg
tctccggtcatccccaggctgaccctcagggtgggagccggtcaggacaagatcgtcatc
agcaaagtggttccaaactcggagccaaagcctgcaggaaccaaggctcctgctgccaaa
atgggtccagggagccgcccccggacgccgcctctgcctccagtgctccccccagtggtc
cccactctgccaccgccctccccgctgccgcccgctcctcccccgccgtcctctctgcac
ccgccgccctccatgatgcccccctccgccaagacgccggtccgcagcgtagtgacggag
accgtcagcacctatgtgattcgggatgaatggggaaaccagatctggatttgtcccgga
tgcaacaaaccggatgacggcagcccgatgattggatgtgacgactgtgacgactggtat
cactggccttgcgtcgggatcctaacaccgccaccggaggaccagccgtggttctgtgtc
aaatgttccagtaagaaaaaggacaaaaaacacaagaagaagaaacacaaaccgcactga
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