Cyprinodon variegatus (sheepshead minnow): 107095103
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Entry
107095103 CDS
T06110
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107095103 (vldlr)
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107095103 (vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
107095103
NCBI-ProteinID:
XP_015246563
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MVTSAVGVLLLLTWLQHCGNVRATKTECEANQFQCGNGRCIPSVWQCDGDEDCADGSDEG
SCVKKTCAEVDFVCRSGQCVPKRWHCDGEPDCEDGSDESVEICRPVRAGLSATRAAVHQL
SPTTRVPSTITGNVTCAPNEFTCESGRCISRNFVCNSEDDCGDGSDEVECAPSSCAPSEF
QCGNSTCIPSSWVCDDDVDCQDQSDEDPTRCGRHPTPPAKCSPSEMQCGSGECIHKKWRC
DGDPDCKDGSDESNCPVRSCGPDQFRCDDGSCILGSRQCNGIRDCADASDEASCKNLTQC
NGPEKFKCRSGECIEMSKVCNKNRDCPDWSDEPIKECNVNECLLNNGGCSHICKDMVIGF
ECDCTPGLQLIDHKTCGDINECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG
KEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNAAALDADFNQQTIFWADLGQKAIYSTVL
DKRGDVGIHRKVIDNVQTPLGIAVDWIYKNLYWSDLGTKTISVANFNGTKRKVLFNSGLK
EPASVAVDPLSGFMYWSDWGEPAKIEKSGLNGVNRQVLVATDIQWPNGITLDLIKGRLYW
VDSKLHMLCSVDLNGDNRNKVLQSADYLAHPFALTVFEDRVFWTDGENKAIYGANKFSGS
DVTTLASNLNDPQDVIVYHELIQLSGTNWCSEKGENGGCSYMCLPAPQINKHSPKYSCVC
PEGQELAADGQRCRPESSSKGPSEDGSKALTQPPKEANISSSIQVDSTARGSAAAWAILP
VLLLAMAGAGAYLMWRNWQLKNHKSMNFDNPVYLKTTEEDLNIDITRHGANVGHTYPAIS
IVSTEDDLS
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccgcagtgggggttctcctgctgctaacatggctccagcactgcggtaac
gtccgagctacgaagacggagtgtgaagccaatcagttccagtgtggaaacggtcgctgc
atcccgtcggtgtggcagtgtgacggagacgaagactgcgcagacggtagcgatgagggc
tcatgtgtaaaaaagacgtgtgctgaggtggactttgtgtgccgcagcggtcagtgcgtc
ccgaagcgatggcactgtgacggcgagccagactgcgaggacggttctgatgaaagcgta
gaaatctgccgtccggtacgtgccggtctgtcagctaccagagctgctgttcaccagctg
tcgcctacaactcgcgtcccttcaactattacaggtaacgtcacctgcgctcccaacgag
ttcacctgtgagagcggccgctgcatctccaggaacttcgtgtgcaacagcgaggacgac
tgcggcgacggctccgatgaggtggagtgcgctccgtcctcctgtgctcccagcgagttc
cagtgcgggaactcgacctgcatcccgtccagctgggtgtgcgacgatgacgtggactgc
caggaccagtctgatgaggacccgacgcgctgcgggcgccacccgacgccgccggccaag
tgctcgcccagcgaaatgcagtgcggctcaggagaatgcatccacaaaaagtggagatgt
gacggcgaccccgactgcaaggacggcagcgacgagtccaactgccccgtgcgcagctgt
gggccggatcagttcaggtgtgacgatggaagctgcatcctgggaagccggcagtgtaac
ggcatcagagactgcgccgacgcgtcggatgaagccagctgcaaaaacttgactcagtgc
aacggcccggagaagttcaagtgtcgcagcggggagtgcatcgagatgagcaaggtgtgc
aacaagaacagggactgtccggactggagcgacgagcccatcaaggagtgcaatgtcaac
gagtgtctcctgaacaacggcggctgctcccacatctgcaaagacatggtgatcggcttc
gaatgcgactgcacgcctggactccagctcatcgaccacaagacctgcggagacatcaat
gagtgcatgaacccagggatctgcagtcagatctgcatcaacctgaagggaggctataag
tgtgaatgtcacaacggataccagatggatccgaccaccggcgtctgcaaggccgttggt
aaggagccgtgtctgatcttcaccaaccgtcgggacatccgccgtctgggtctggagagg
aaggagtacactcagattgtagagcagcagagaaacgctgcggctttggacgcagacttc
aaccagcagaccattttctgggctgatctgggtcagaaggccatttacagtaccgtcctg
gacaagcgaggagacgttggaatccacaggaaagtgatcgataacgtccaaactcctctg
gggatcgctgtggactggatttataagaacctgtactggtccgatctgggcaccaaaacc
atttctgtggcaaacttcaatggaacaaagcggaaagttctcttcaacagcggcctcaaa
gaacccgcttcagtggccgtggatcctctgtctgggttcatgtactggtctgactggggg
gagcccgccaagatagaaaagtccggtctgaacggagtgaaccggcaggttctggtggca
acggacatccagtggccgaacgggatcacgcttgatctgatcaaaggccggctgtactgg
gtcgactccaagctgcacatgctctgtagtgtagacctgaacggggacaaccggaacaag
gtgctgcagtctgcagactacctggctcacccctttgccctcacagtctttgaggatcga
gttttctggacagacggtgaaaacaaagcgatctacggcgccaacaagttctctggttct
gacgtaacgacgctcgccagcaatctgaacgaccctcaggacgtcatcgtgtaccatgag
ctgatccagctgtcgggaaccaactggtgctcagagaaaggggagaacggaggctgcagc
tacatgtgtctccctgctccgcagatcaacaaacactcccccaaatacagctgtgtgtgt
cctgaaggccaggagctggctgccgacggccagcgctgcagacccgagtcttcctccaaa
ggtccctcagaggatggtagcaaagcgctaacgcagccgcctaaagaagcaaacatcagc
tcgtccatccaggtggactccacagccagaggctctgctgcagcctgggccatcctgcct
gtcttgctgctggccatggccggggcgggcgcctacctgatgtggaggaactggcagctg
aaaaaccataagagcatgaacttcgacaacccagtctaccttaaaaccacagaagaagac
ctaaacattgacatcactcgccacggcgccaacgtaggccacacctacccagcgatttct
atcgtcagcacagaagacgatttatcctga
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integrated database retrieval system
