Cyprinodon variegatus (sheepshead minnow): 107095108
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Entry
107095108 CDS
T06110
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03440
Homologous recombination
cvg04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107095108 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107095108 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107095108 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107095108 (brcc3)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107095108 (brcc3)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107095108 (brcc3)
Peptidases and inhibitors [BR:
cvg01002
]
Metallo peptidases
Family M67
107095108 (brcc3)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107095108 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
107095108 (brcc3)
BRISC complex
107095108 (brcc3)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
107095108 (brcc3)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107095108 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
TEDC1
REP_ORF2-G2P
Motif
Other DBs
NCBI-GeneID:
107095108
NCBI-ProteinID:
XP_015246568
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MAVSSVHLESDAFLVCMNHALSTEKEEVMGLCIGEVEASRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLADSTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQGFV
GLIFSCFIEDKNTRTGRVLYTCFQSAQAQKGSEYERVEIPVHVVPREAIGKACLESAVEL
PRILCQEEQDTYRRIHGLAHLDPVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLQHNR
QSVTELQREKERLLRELAAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcagctccgtccacctggagtctgacgccttcctggtctgcatgaaccacgcc
ctgagcaccgagaaggaggaggtgatgggtctgtgcatcggggaggtggaggcctcccgg
atcgtccacatccactcggtgatcatcctccgccgctccgacaagcggaaggaccgggtg
gagatctccccggagcagctgtccgccgcctccaccgaggcggagcggctggcggacagc
accggcagacccatgcgggtggtgggctggtaccactcccacccgcacatcaccgtctgg
ccctcccacgtggacgtgcggacccaggccatgtaccagatgctggaccagggcttcgtg
ggactcatcttctcctgtttcatcgaggacaagaacacccggacgggccgcgtcctctac
acctgcttccagtccgcgcaggcgcagaagggctccgaatacgagcgcgtggagatacct
gtgcacgtggtgccccgggaggcgatcgggaaggcgtgtctggagtccgccgtggaactg
ccgcggatcctgtgtcaggaggagcaggacacgtaccgcaggatccacgggctggcccac
ctggacccggtcaccaagatccacaacggctcggtgttcaccaagaacctgtgcagccag
atgtcggccgtgagcggcccgctgctgcagtggctggaggaccggctgcagcacaaccgg
cagagcgtcacggagctgcagcgggagaaggagcggctgctgcgggagctggcggcgctg
tga
DBGET
integrated database retrieval system
