Cyprinodon variegatus (sheepshead minnow): 107095116
Help
Entry
107095116 CDS
T06110
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107095116 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107095116 (myo5b)
04131 Membrane trafficking [BR:
cvg04131
]
107095116 (myo5b)
03029 Mitochondrial biogenesis [BR:
cvg03029
]
107095116 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107095116 (myo5b)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107095116 (myo5b)
mRNA cycle factors
P-body specific factors
107095116 (myo5b)
Membrane trafficking [BR:
cvg04131
]
Others
Actin-binding proteins
Myosins
107095116 (myo5b)
Mitochondrial biogenesis [BR:
cvg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107095116 (myo5b)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107095116 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Myosin_N
nSTAND3
Ac76
Motif
Other DBs
NCBI-GeneID:
107095116
NCBI-ProteinID:
XP_015246573
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MASDYNPYCQFTRVWIPDQDDVWKAAEITKDYKEGEPVLHLQLEDGTPLEYQVGPKSNAL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNNIYTYCGIVLVAINPYEQLQIY
GEEVITAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSSSDANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIVFSRHYHIIGANM
RTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKELGLTSAEDFTYTSLGENIFIEGV
NDAEDLKRTREAFTLLGIKESNQSGIFKILASILHLGNVEIISERDGESCHVGRNDVHLE
HFCRLLGVELKQMDHWLCHRKLATASETYVKTMSCKQANNARDALAKHIYARLFDWIVEH
INKALQTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSGSAHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFQEKDDLP
SSKSSKVNVRSLKTVPKVPNKEHRKTVGHQFRSSLHLLMDTLNATTPHYVRCIKPNDFKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMRKSDLSSADKKQVC
KNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRSACIKIQKTVRGWLQRIRYR
KIRRAALELQRYGRGYLARRYAEFLRQNRAALICQKQYRMVRERRKFLRIRRAAMTIQAY
TRGMFTRRIYWEFLLHHKAMIIQKHVRGWLQRKKFLRARNAAIVIQCGFRRMQAKRLLKQ
RKIEARSAQHLKKLNTGMENKIVQLTRKMDEQSKELKTQNEQLLTVNASLGSEVTKLQKE
LELVRNQQPDGGKVMSLQEEVEKLREELQEAHTQRKKMEEEHGSEKLSLTQRVEELEKEN
SLLKTEKEEMNRRIQQQAKNSAEDLSSSSLETELDQERERYQNLLKEFSRLEMRYENLKE
EVSLSKFHPGHRRTTSDQISLESDSNYPSVSTSEVGDTEDSIQLVDEMGVEKAAMDISLF
MKLQKRVRELETERKRLQVNLDKMEEIAKRKGSEAKSPTSDVETADLAYNNLKRQELESE
NKKLKNDLNDLRKTISERASQDSSSSELQDSYNLLLSQLRAANEELDARKEEVLILRTQI
VSNVQLQEQSERIESEVDGGLNNSKEPMDKEEALKAYHGLCESKKLLEAQLQTQTRQHRD
ELEALHTQIELLKDDIEKKQELLNYTSSLSPEAKVEYSVQQEITRLTNDNLDLKELVEKL
EKNERKLKKQLRIYMKKVQELAAAQAAAQSGSSKGELTRQVTLQRKEKDFEGMLEYMKED
EALLIKTLITDIRPSSVAATVPCLPAYILFMCIRHADYVNDDQKVESLLTSTINAIKKVL
KRNNDDFEMMSFWLANSSRLLHCLKQYSGEEAFMTQNTPKQNEHCLKNFDLAEYRQVLSD
LSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDTDADGPTTYT
LQGLIRQLSQFNSIMRDQGLDPEIVGQVFRQLFHCINAVTLNNLLLRKDVCSWSAGMQLR
YNTSQLEEWLRANNLFQSKASATLEPIIQAAQLLQVKKKTSQDAEAICSLCTALTVQQIV
KILNLYTPLNEFEERVTVSFIRNIQSNLQERNDPPQLLMDTKHTFPVLFPYAPSALNLET
MHIPASLGLDFLIRV
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattataacccctactgtcagttcacgcgggtctggatcccggaccaggat
gacgtgtggaaagcggctgagatcaccaaagactacaaagagggagaaccggtcctccac
ctgcagctggaggatggaacgcccctggagtaccaggtgggtccaaaatccaacgcgctg
ccgttcctgaggaaccccgacatcctggtgggagagaacgacctgacggcgctcagttac
cttcatgaacccgccgtgttgcacaacctgagggtccggttcctggagtccaacaacatc
tacacctactgtggtatcgtcctggtggccatcaacccgtacgaacagctgcagatctat
ggagaggaggtgatcaccgcctacagcggtcagaacatgggagacatggaccctcacatc
ttcgccgtggccgaggaggcgtacaaacagatggccagagacgagaagaatcagtcgatc
atcgttagcggagaatccggagcaggaaagacggtttcggccaagtatgccatgaggtac
tttgccacggtgggcggctcctccagcgacgccaacgttgaggagaaggtcctggcctcc
aatccaatcatggaggccattgggaacgccaagaccaccaggaacgacaacagcagccgc
tttgggaagtacatccagatcgtgttcagcaggcattaccacatcatcggagccaacatg
aggacctacctgctggagaagtcccgcgtcgtcttccaggcagaagaagagcggaactat
cacatcttctaccagctgtgcgcctcggccgctttacccgagtttaaggagctcggcctc
acgagtgcagaggacttcacctacacctctttaggggagaacatcttcattgaaggagta
aatgatgctgaggaccttaaacggaccagagaggccttcaccctactgggtataaaggag
agcaatcagagcggcatctttaagatcttggcctccatccttcacctggggaacgtggag
atcatctctgagcgtgacggagagtcctgccacgtcggtaggaacgacgtccacctggag
cacttctgcagacttctgggcgtggagctgaagcagatggaccactggctgtgccacagg
aagctggccaccgcctcggagacctacgtgaagaccatgtcgtgcaaacaggcgaacaat
gcgcgtgacgctctggccaagcacatctatgcccgcctcttcgactggatcgtggagcac
atcaacaaggcgctgcagacgtcctccaagcagcactccttcatcggcgtcctggacatc
tacggcttcgagaccttcgaggtcaacagcttcgagcagttctgcatcaactacgccaac
gagaagctccaacagcagttcaactcgcacgtcttcaagctggagcaggaggagtacatg
aaggagcagatcccctggaccctcatcgacttctacgacaaccagccctgcatcgacctg
atcgaggcccggcttggcatcctggacctgctggacgaggagtgcaaggttccaaaggga
acggatcagaactgggcccagaagctctacaagcagcactctggcagcgcacacttccag
aaacccagaatgtccaacacgtccttcatcatcatccacttcgccgacaaggtggagtat
cagtgtgaaggcttcctggagaagaacagagacaccgtctatgaggagcagatcaacatc
ctgaaggccagccagttccaactggttgctgacctgttccaagagaaggatgaccttccc
tcctccaaatcctccaaggtcaacgtccgctccctgaaaaccgtccccaaggttcctaac
aaggagcacaggaagactgtgggacatcagttccgctcgtcgctgcatctcctaatggac
actctgaacgccacgacgcctcactacgtccgctgcatcaaacccaacgacttcaaggag
gccttctcgttcgactcccggcgggccgtccagcagctccgagcctgcggagttctggag
acgatccggatcagcgccgccgggtatccgtccaggtggacctacccggacttcttcagc
aggtaccgggttctgatgaggaagtcggacctcagctccgccgataagaagcaggtttgc
aagaacctgctggagacgctgataaaggaaccggacatgttccagtttggaaagacgaag
atcttcttccgggccggtcaggtggcctacctggagaagctccggaccgataagttccgc
tcggcctgcatcaagatccagaagacggtccgaggctggctgcagaggatccggtaccgg
aagatccgcagagccgcgctggagctgcagagatacggccggggatacctggcccgcagg
tatgcggagttcctgcgtcagaaccgggccgccctgatctgtcagaaacagtaccgcatg
gtccgagagaggaggaagttcctgaggatccgacgggccgccatgaccatccaggcctac
accagagggatgttcacccgcaggatctactgggagttcctgctgcaccacaaggccatg
atcatccagaagcacgtccgcggctggctgcagaggaagaagttcctgcgggcgcgcaac
gccgccatcgtcatccagtgcggcttcagaaggatgcaggccaagcggctcctgaagcag
cggaagatcgaagcgcgctccgcacagcatctgaagaagctcaacacagggatggagaac
aagatcgtccagctgacgaggaagatggacgagcagtccaaggagctgaagacgcagaac
gagcagctgctgacggtgaacgcctccctgggctcagaggtcactaagctgcagaaggag
ctggagttggtccggaaccagcagcccgacggaggcaaggtgatgtcactacaggaggag
gtggagaagctgagggaggagctgcaggaggcgcacacccagaggaagaaaatggaggag
gagcacggcagtgagaagctgagcctcactcagcgggtggaggagctggagaaggagaac
tccctgctgaagactgagaaggaggaaatgaaccgacggatccagcagcaggccaagaac
tctgcagaggacctgagcagctcgtccctggagaccgagctggatcaggagcgagaacgc
taccagaacctcctgaaagagttctccaggctggaaatgagatatgagaacctgaaggag
gaggtgtccctgagcaagttccaccccggccaccgcaggaccacgtctgaccagatcagc
ctggagtccgactccaactacccgtctgtctccacctccgaggtgggagacaccgaggac
tccatccagctggtggacgagatgggggtggagaaggcggcgatggacatcagtctgttc
atgaagctgcagaaacgagtcagagagctggagacggagaggaagaggctgcaggtcaac
ctggacaagatggaggagatcgccaagcgtaagggttctgaggccaagagcccaacttct
gacgtggaaactgcagatctggcctacaacaacctgaagagacaggagcttgaatcggaa
aacaagaagctaaagaacgacctgaacgacctgaggaagaccatctctgagcgagcatcg
caggacagctcatccagtgagctgcaggacagctacaacctgctgctcagtcagctgagg
gcagccaacgaggagctcgacgcccgtaaggaggaggtccttatcctgaggacgcagatc
gtgagcaacgtccagctgcaggagcagagcgaacgcatcgaaagtgaggttgatggagga
ctgaacaacagcaaagagccaatggacaaagaggaggccctcaaagcgtaccatggactg
tgtgagtccaagaagctcctggaggcccagctgcagacccagacccggcagcaccgggac
gagctggaggctctgcacactcagatcgagctgctgaaggacgacatcgagaaaaagcag
gagctcctcaactacacctcgtctctgtccccggaggccaaggtggagtacagcgtccag
caggagatcactcggctcaccaacgataacctggacctcaaggagctggtggagaaactg
gaaaagaacgagaggaagctgaagaagcagctgaggatctacatgaagaaggtccaggag
ctggcagctgctcaggctgcggctcagagcggcagcagcaagggggagctgacccggcag
gtgaccctgcagaggaaggagaaggactttgaggggatgctggagtacatgaaggaggac
gaggcgctgctcatcaagacgctcatcacagacatccggcccagctcggtggcggccacc
gtcccctgcctgcccgcctacatcctcttcatgtgtatccgccacgccgactacgtcaac
gacgaccagaaggtggagtctctgctcacctccaccatcaacgccatcaagaaggtcctg
aagagaaacaacgacgactttgagatgatgtccttctggttggccaacagcagccggctg
ctgcactgcctgaagcagtacagcggggaggaggccttcatgacccagaacacgcccaaa
cagaacgagcactgcctgaagaacttcgacctggccgagtaccggcaggttctgagcgac
ctctccatccagatctaccagcagctcatcaaggtggccgagggcatcatccagcccatg
atcgtgtcggccatgttggagagcgagagcatccccagcctggcaggagtgaagcccatg
ggctaccggaaccgctcgtccagcatggacacggacgcggacgggccgaccacctacacc
ctgcagggtctgatccggcagctcagccagttcaacagcatcatgagggaccagggtctg
gacccggagatcgtgggccaggtgttccggcagctcttccactgcatcaacgccgtcacg
ctcaacaacctgctgctgcgcaaagacgtctgctcctggagcgccggcatgcagctcagg
tataacaccagtcagctggaggagtggctgcgagcgaacaacctgttccagagcaaagct
tctgccacgctggagcccatcatccaggcggctcagctgctgcaggtcaagaagaagact
tcccaggacgctgaggccatctgctcgctgtgcaccgcgctcaccgtgcaacagatcgtg
aagatcctgaacctctacacgccgctgaatgagtttgaggagcgcgtcaccgtgtccttc
atcaggaacattcagagtaacctccaggagaggaacgaccctccccagctcctgatggac
accaagcacaccttccccgtcctcttcccctacgccccctctgctctgaacctggagacc
atgcacatccccgcctcgctcggcctggacttcctcatcagggtgtga
DBGET
integrated database retrieval system
