Cyprinodon variegatus (sheepshead minnow): 107095131
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Entry
107095131 CDS
T06110
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03030
DNA replication
cvg03410
Base excision repair
cvg03420
Nucleotide excision repair
cvg03430
Mismatch repair
cvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107095131 (pold1)
03410 Base excision repair
107095131 (pold1)
03420 Nucleotide excision repair
107095131 (pold1)
03430 Mismatch repair
107095131 (pold1)
03440 Homologous recombination
107095131 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvg03032
]
107095131 (pold1)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107095131 (pold1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107095131 (pold1)
DNA replication proteins [BR:
cvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107095131 (pold1)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107095131 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
107095131 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
107095131
NCBI-ProteinID:
XP_015246594
Ensembl:
ENSCVAG00000006142
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MEFKRRNGGPPMGGSSQAKRGKVNGEWEDSPSQFEEELLMFDEAEMDMEDMEGQAGHDVI
PVGDLFSADLNPRWRRPHAPTLDPSSETLVFQQIDLDYYLGNSVAGMPGQSQAKVPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPAPSGFSSNYLGEFKRELNSVVLKDMRSNKDNISITV
LAVDICRKESMYGYHGQRSLDFLRITMAMPRLIAPAKRLLEQGFKFGPFPVQSYQAYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRMREEKSSAATDSLTPGKVSFCQYEVDVGWTDLI
SHPAEGEWQKIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGESEPFIRTVFT
LQSCASIVGSQILCFTQEKKLLESWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVN
YFPYLGRMRGVKSVLRDSSFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEKGYVPL
CPKVSCSPGGYRLLKAFFSCRYYSVPIATLDFSSLYPSIMMAHNLCYTTLLQKGSAEKLG
LSSDDFIKTPTGDQFVKSSVRKGLLPEILENLLSARKRAKSELKKETDPFKKQVLDGRQL
ALKISANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTLSNGYLADAKV
IYGDTDSVMVKLGVTTVKEAMEIGREAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAG
LYFSSSPDTHDKMDCKGIETVRRDNCPLVANLINTCLQKILIDRDPQGAVEHAKEVISDL
LCNRIDISQLVITKELTRTAQEYAGKQAHVELAERMRKRDAGSAPNLGDRVPYVIIKATK
GVAAYMKSEDPIYVLENNIPIDTQYYLEQQLSKPLLRIFEPILGETKAESVLLKGDHTRC
KTVLTSKVGGLMAFAQKRSTCIGCKAVLKTDAAVCDFCKKKESELYQKEIFHLNTLEERF
SRLWTQCQRCQGSLHEDVLCTSRDCPIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaaacgccgtaatggtggccctcccatgggaggttcgtcccaagccaagcga
ggtaaagtgaatggcgaatgggaggatagtccatcccagtttgaggaagaattgttgatg
tttgacgaggcagagatggatatggaggacatggagggacaggcaggacatgatgtcatt
cctgttggtgaccttttctcagcagacctaaacccacgttggaggagacctcatgccccc
acactggacccatcctctgaaacattagtgttccagcagattgatctagactattacctc
ggtaactctgtagctggcatgccaggccaatcacaagcaaaagtaccaatcattcggatg
tttggtgtaactgacagcggcaacagtgtgtgctgtcatgttcacggctttgcgccttac
ttctatgttcctgcaccaagcggattttcatctaactacctcggtgaatttaaaagagag
ttgaactctgtggttcttaaggacatgcgctccaataaggacaatatctccatcacggtg
cttgctgtggacatctgccgcaaagagagcatgtacggttaccacgggcagcgcagcctg
gatttcttgcggattacgatggcgatgcctcgtctcatcgcgcctgcaaagcgactgctg
gaacagggctttaagtttggaccatttccagtccagagctaccaggcctatgaggccaac
atagattttgaaattaggttcatggtggacagtgatgtagttggatgctgctggattgaa
cttcccaaaggaaagtacagaatgcgtgaggagaagagctcggcggccacagattctctg
actccaggaaaggtctctttctgtcagtatgaagtagatgttggatggacagacttgata
agtcaccctgcagaaggagagtggcagaagatcgctccactcagggtccttagctttgac
atagagtgcgcaggaaggaagggaatctttccagaagcggataaggatccagtgattcag
atagcctctatggtccaacggcagggtgagagcgagccgttcatccggactgttttcacc
ctccagtcctgcgctagcatcgttggctcgcagatcttatgctttactcaggagaaaaag
cttctagagagctgggcggagtttttgaggactgtggatccagacatcatcaccggatac
aacatccagaactttgactttccctacttgctcaacagagcagctgctttgaaggtgaat
tacttcccatacttgggccgaatgcgaggcgtcaaatcagttctgcgagattcaagtttc
cagagtaagcagatgggacgcagagagaacaagaccattaacatggagggtcgagttcag
tttgacctgctgcaggttcttctcagggattataaactgcgctcctacacgctgaacgct
gtcagtttccattttttgcaagaacagaaggaagatgtgcagcactctatcatcaccgat
ctgcagaatggaaacgaacaaacgcggcgtcgccttgctgtctactgcctgaaagatgcc
taccttccgctccgcctgctgcagaaactgatgtgcgtgatcaattacatggagatggcc
agagtaaccggcgtgcctctcacctacctgctctcaagaggacagcaaatcaaggttgtc
tctcagctgctgcgacaggctatgaaacaggacctggtaatgcctgtggtgaggacagag
gggggagaagactacacaggagcaacagtcatcgagccagagaaagggtatgtgcctctg
tgtccaaaggtctcctgctctccaggggggtacagattattaaaagcatttttttcctgt
agatattacagcgttcctatcgccacgctggacttttcctccttgtatccgtccatcatg
atggctcacaatctgtgctacactaccttgctgcagaaaggctctgctgaaaaactggga
ctgtcttcagatgacttcatcaagacccccacaggcgaccagtttgtgaagagctctgtg
aggaaaggtcttcttccagagatcctggagaacctgctgtctgcccgaaagagggctaaa
tcagagctaaagaaggaaactgaccctttcaagaagcaggtgctggatggtcgacagtta
gccctgaaaatcagcgccaactcggtgtacggcttcaccggggcccaggtgggcaaattg
ccctgcctggaaatctcgcagagtgtcactggttttggaagacagatgattgagaaaacc
aaacagctggtggagtccaaatacaccctttccaacggctacctagcagatgctaaggtc
atctacggcgacactgactccgtcatggttaaacttggtgtcaccaccgtgaaggaagcc
atggaaattgggagggaagcagctgagtgggtgtcgtcccattttacacctcccatcaaa
ctggagtttgagaaggtgtactacccatacctattgatcaacaagaagcgctatgcaggc
ttgtatttctcctccagtccagacactcatgacaagatggactgtaaaggcattgagaca
gtccgcagagacaactgccctctagtggccaacctcatcaacacttgtctacaaaagatc
ctcattgacagagatcctcaaggcgcagtggaacatgcaaaagaagtgatctcagacctg
ctgtgcaatcgcatcgacatcagtcagttggttataacgaaggagctaacgcgtacagcc
caggagtatgctggcaagcaggcacacgtggagctggctgaaagaatgagaaaaagggat
gcaggtagtgccccaaacctgggagacagagtcccctacgtcatcatcaaggctacaaag
ggagtagcggcgtacatgaagtcagaggacccaatctatgtgctggagaacaacatcccc
atcgacacccaatactacctggagcagcagctctccaaacccctgctgagaatatttgag
cccatcctgggggagaccaaggcggagagtgtcctgctaaagggcgaccacacccgctgt
aagactgttttgacctcgaaggttggaggcctcatggcatttgctcagaagagaagcacc
tgcatcggatgcaaagctgtcctcaagactgatgcggccgtgtgtgatttctgcaaaaag
aaggaatctgaactttatcaaaaagagatcttccacctgaacacgttagaggagcgtttc
tcccgcctgtggactcaatgccagcgctgtcagggctcccttcatgaggacgtgctgtgc
accagccgagattgcccaatcttctacatgaggaagaaggttcagaaggatctggatgac
cagagcaagctggtgtctcgatttggatggtga
DBGET
integrated database retrieval system
