Cyprinodon variegatus (sheepshead minnow): 107095251
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Entry
107095251 CDS
T06110
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107095251 (dcaf11)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107095251 (dcaf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Cytochrom_D1
PROPPIN
Beta-prop_IFT140_1st
Beta-prop_LRRK2
CxC5
Motif
Other DBs
NCBI-GeneID:
107095251
NCBI-ProteinID:
XP_015246748
Ensembl:
ENSCVAG00000000615
UniProt:
A0A3Q2CAX4
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MGSQSSSGMSCGRGSSSGNPAEQSEGAEPNQSSSGSGSSSSRGRRTADRQQGDRQSAFEE
DVDLAEVLAYLLRRGQVRVVHGHEATGLQLVQSYSDSDDDSDGAWDGRLGDRYNPPVDTQ
PDTQEVDRSEIRTQVLLATASSSLKTRHSFTHMLTEREQGRCRGSSFSHGECSRIRTHFL
PNYVSHKDKYIQKAFCGVFSEEGNMFLSACQDQNIRLYDTSRGRFHLQRTVKARDVGWSV
LDVCFTPDTRHVLYSSWSDYIHMCSIDGDSENHTALDLNPDERRFCVFSLAASTDGKEIL
GGANDGCLYVFDLEQNKRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLR
EDRPQPVGQLAGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVT
QQNWDYRWQQVPQRALKKHKLAGDTSVMTYRGHGVLHTLIRCRFSPEFSTGQRFIYSGCS
TGKIVIYDVLTGLVVSRLSGHDACVRDVSWHPYDDKIISSSWDGAVRMWEHRQTHPLEEE
REREIDTWTEKRDEGGDGRCH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtccagttctgggatgtcttgtggaaggggctcttccagtggcaaccca
gcagagcagtcagaaggagcagaaccgaaccagagcagcagcggcagcggcagcagcagc
agccggggcaggaggacggctgacaggcagcagggggacagacagtctgcttttgaggag
gacgtagacttagctgaagttctggcttacctactgagaaggggccaggtcagagtggtc
catggccatgaagctactgggctgcagctggtccagtcatactctgactctgatgatgac
agcgacggagcctgggatggacgtctgggcgaccgctacaacccgccagtggacacccag
cctgacacacaagaagtggaccgcagtgagatccgaacgcaggtcctcctggctacagcc
tcatcgtccttgaaaacgcgacacagtttcacccacatgctcacagagagagaacaaggc
agatgtagaggttccagtttttctcatggggagtgcagtcgtatccgcacacatttcctg
ccaaactatgtgtctcataaggataaatacatacagaaagccttttgcggagtgttcagc
gaggagggcaacatgttcctctctgcctgccaagaccagaacatccgcctctacgacacc
tccagggggcgtttccacctgcaacggacggtgaaggcccgtgacgtaggctggagcgta
ttggacgtctgcttcactccggatactcgccatgtgctctactccagctggtctgactac
attcatatgtgcagtatagatggcgacagtgaaaaccacaccgccctggacctcaatcca
gatgagaggaggttctgcgtgttctcgctggctgcgtcaacagatggcaaagagatcctg
ggcggggcaaatgatggctgcctttatgtttttgatctggaacagaataaacgaacgctg
aagatcgatgcccacgaggacgacgtgaacgcggtggcattcgccgacagctcgtcccag
ctgctcttttctggcagtgacgacgctctgtgcaaggtgtgggacagacggactctgcga
gaggacaggccgcagcccgtcggacagctggccggccaccgagatggcatcaccttcatc
cacagcaagggcgacgctcgctatctcatcagcaactccaaggaccagtccatcaagctg
tgggacgtccgaaagttctcacccaaagagggtttagctgcatcccgcctggcggtcacc
caacaaaactgggactaccgctggcagcaggttccccagagagccctaaagaaacacaag
ctggccggcgacacctcagtgatgacctaccgcggccacggcgtcctgcacacgctcatc
cgctgccggttctctccggagttcagcactgggcagaggttcatctactccggctgttcc
acaggaaagatcgtcatctacgacgtgctgaccggcttggtggtgtccaggctgtcgggt
cacgacgcgtgtgtgagggacgtcagctggcatccctatgatgacaaaatcatcagcagc
tcttgggacggagcggtgcggatgtgggagcacagacaaacccatccactggaggaggag
cgggagagagagattgacacatggacggagaagagggacgaaggaggagacggaagatgc
cactga
DBGET
integrated database retrieval system
