Cyprinodon variegatus (sheepshead minnow): 107095281
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Entry
107095281 CDS
T06110
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03030
DNA replication
cvg03410
Base excision repair
cvg03420
Nucleotide excision repair
cvg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107095281 (rfc4)
03410 Base excision repair
107095281 (rfc4)
03420 Nucleotide excision repair
107095281 (rfc4)
03430 Mismatch repair
107095281 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvg03032
]
107095281 (rfc4)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107095281 (rfc4)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107095281 (rfc4)
DNA replication proteins [BR:
cvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107095281 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
107095281 (rfc4)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107095281 (rfc4)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107095281 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
107095281 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_30
AAA_22
AAA_11
AAA_16
DUF815
Mg_chelatase
Gp44_lid
RuvB_N
AAA_24
AAA_19
Cdc6_lid
SLFN-g3_helicase
AAA_14
AAA_28
ResIII
AAA_5
AAA_7
wHTH-PRTase_assc
AAA_3
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
107095281
NCBI-ProteinID:
XP_015246784
Ensembl:
ENSCVAG00000000953
UniProt:
A0A3Q2DDV5
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MQAFLKGANFPTSKPQKEKSTAGPSAEKKTKAIPWVEKYRPKSVDEVAFQDEVVAVLKKS
LKGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRPDGKMCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKEKLKYSNESIAALVQLSQGDLRKAITIL
QSAARLNTHKEITEQAIVEIAGVVPSTMIDNLLQICFKGTFEKLEVAVRNLVNEGYAATQ
ILSQLHSCVLEKDIPDMQKSAIAEKMAVTGKCLADGADEYLQILSLCSVIMQQASQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttctcaaaggagcaaattttccgacaagcaaacctcagaaggagaagtca
acagctggaccgagtgcagagaaaaaaaccaaagccattccctgggtagaaaaatacaga
cccaaatctgtggatgaggtggccttccaggatgaagttgtagccgtgctgaagaagtca
ctcaaaggagcagatcttccaaatctgctcttctacggccctcctggaacaggaaagacc
tccactatcttagctgctgccagagagctttatggaccagagttgttccggcagagggtg
ctggagttgaacgcttcggatgaacgaggcattcaggtcatcagagagaaggtcaagaac
tttgctcagctgacggtggctgggactcgtccagatgggaagatgtgtcccccttttaag
atcatcatactggatgaggctgactccatgacggctccagcacaagctgctctcagacga
acgatggagaaggaatctcgcaccacgcgcttctgtctcatctgtaactacatcagcagg
atcattgagcctctcacttcaagatgttctaagtttcgtttcaaacctctggccaatcag
atccaagaagaacgtctgctagaaatatgcgaaaaagagaagctcaaatactctaacgag
agcattgcggcgctggtgcagctctctcagggggacctgagaaaagccatcacaatcctg
cagagtgcagcccgtctcaacactcacaaggaaatcactgagcaagctatcgttgagata
gcaggggttgttccttccacgatgattgataatttgctccaaatctgcttcaaagggaca
tttgagaagctagaagttgcagtaaggaacctggtgaatgaaggttatgcagcaacacag
atcctgagtcagcttcatagctgtgtcttggaaaaagacatccctgacatgcaaaagtca
gccattgcagaaaagatggcggttacgggaaagtgccttgctgacggtgcagacgagtac
ctgcagatactaagtttgtgttcagtgatcatgcagcaggcttcccaaagttaa
DBGET
integrated database retrieval system
