Cyprinodon variegatus (sheepshead minnow): 107095393
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Entry
107095393 CDS
T06110
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 4
KO
K24682
patched domain-containing protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107095393 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Other domain-containing proteins
Patched domain-containing proteins
107095393 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
107095393
NCBI-ProteinID:
XP_015246958
Ensembl:
ENSCVAG00000016187
UniProt:
A0A3Q2E8X4
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MCFIGGDGASASRILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPERDLEVLVAPTHSLAKIERSLANSLFPVDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLELRVTYKGFNYTFGHLCVLSHRDKRCLLDDIITIFQDIQQA
VLSNSTFHKVPLSYPNTTLKNGRLSFIGHQLGGVSFSTNSRDQQVKFARAIQITYYLRNH
GPVVQDVIAERWENEFCALVTRLSTAEPPHPTDQLLIQSLTSFSLWQDFHQTGVLSKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSFAATQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKMSWMDNFFHYLRVVNVSASTKSDFINILKGSFLRSPEYQHFTEDIIFSKN
RETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFLIGIMPLVF
VPSNLTYTLFKCSLLTAGCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREEIECIEVRENPDHVTNV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcgagccggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttccttctactggctcggcttattcgttagcagg
caccccgtcttcttcctcaccgtccccgcggtgctcaccatcatcttcggatccaccgtg
ctgagccgtttcaagcctgagcgggacctggaggtgctggtcgccccgactcacagcctg
gccaagatcgagcgcagcctcgccaacagtctgttccccgtcgaccagtctaagcacaag
ctgtactcggatctgcacacgccgggcagatatggtagactgatcctgctggccaagtcc
gggggtaacatcctggagctggccgaccaggtcctgcaggtccacaagcaggtgctggag
ctgcgcgtcacctacaaggggttcaactacaccttcgggcacctgtgcgtgctgagccac
agggacaagcgctgcctgctggatgatatcatcaccatcttccaggacatccagcaggct
gtgctctccaacagcaccttccacaaggtgcccctcagctacccgaacaccactttaaag
aatggacgtttgtcctttattggacaccaacttggaggggtgtccttctcaaccaacagc
agggaccagcaggtcaagtttgcccgggccatccagatcacatactacctccgtaaccat
ggtcccgtggtccaggatgtcattgcggagcgctgggaaaatgagttctgcgctcttgtt
actagactgtccacagctgagccgccgcacccaaccgaccagctactcatccagtcactc
acctccttcagcctgtggcaggactttcaccagactggtgtgctgtcgaagggggaggtg
ctggtcagcctggttctggttctcctagctgccaccatctccagctctatgagggactgc
ctaagaggaaagccttttcttggccttttgggtgtgctgaccatttgcatcgccaacgtg
acagctgcagggatcttcttcatatcggatgggaaattcaattccacgctgctggggatt
ccgttcttcgctatgggtcatggaaccaaaggggtgtttgaacttctggcagggtggagg
agaacaagggaaaacctgccattcaaggagcgtgtggctgacgcctttgcagatgtgatg
gtgtgctacaccatgacgagctcactctacatcatcacctttggcatgggagctagccct
ttcaccaacattgagtctgtgaaaatcttctgccagagcatgtgtgttgccatcttggtc
aactacttttatgttttttctttttatggctcttgcttggtgtttgctggacagctcgag
cagaaccgataccacagtgttttctgttgtaagatcccgtcagtagaatatttggaccgc
cagccgacttggtttaaaaccatgatgagtgacggccatgacctgtccacgcaccatgac
agtgtgccataccaaaatcacttcatccagcacttcctacgtgaacattacactgagtgg
attaccaacacatatgtgaaaccttttgtggtcattctatatctcatctatgcttctttt
tccttcatgggatgtttacagatcagtgatgggtcgaatatagtgaacctgctggccagt
aattcaccaagcgtttcgtttgctgctacccagcagaagtactttagtaattacagccct
gtaattgggttttatatctatgagcctattgagtattggaactccactgtgcaggagcac
ctaaagactctaagccatggcttcaacaagatgtcctggatggacaactttttccattac
ctccgggtagtgaatgtcagtgcatcaactaagagtgactttatcaacatcctgaagggt
tctttcttgcgcagtccagagtaccagcactttacagaggacataatcttctctaaaaac
cgcgaaactgacgagtacgacatcatcgcctcacggatgtacttggtggcacggaccaca
gagaagaagagggaagaggtggtggagctcttggaaaaacttcgtcccttgatgctaatc
aacagcatcaaattcattgccttcaatcccacatttgtgttcatggaccgctacagttcc
tctgtcatctcaccaatcttgacctcaggcttcagcgtacttaccatccttattcttaca
ttcttcctagtcattaaccctttgggaaacttctggctcattctcacggttacgtccgtg
gagctgggtgttttgggattgatgaccctctggaatgttggcatggacagcatctcaatc
ctgtgccttatttatacactcaacttcgctatggatcactgtgcaccacacctgtacact
tttgtgttggccactgagcacaccaggacgcagtgcatcaagctggcactggaggagcac
ggggcggcgatcctgcagaacacatcctgctttttgatcgggatcatgcctctggtgttt
gtgccttccaatctgacctacacgctgttcaagtgctccctactcacggcgggatgcacc
ctgctgcactgtttcgtcatcttgcccgtattcctgactttctttccaccatccaaaaag
aggcacaagaaaaaaaagagggcaaagcggaaagagcgggagagggaacgagagagggag
agggaaagagaggagatagagtgcattgaagtcagggaaaatcctgatcatgtgacaaat
gtttga
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