Cyprinodon variegatus (sheepshead minnow): 107095399
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Entry
107095399 CDS
T06110
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G-like
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107095399
04020 Calcium signaling pathway
107095399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107095399
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107095399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107095399
NCBI-ProteinID:
XP_015246966
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
VPYLHRTSSMQSSRPPSLGHGRTAEHNDCNGKGSPSALSQTNVSQDENTEDENVEEEVSQ
GRLARILRWMEKKQPEWCRQRDTWSLYLFPPESRCRRQCEKIINHKMFDHVVLVIIFLNC
ITIAMERPGISPDSAERIFLMWSDYIFTAIFVAEMTVKIVALGWLFGNNAYLRSSWNILD
GILVMISVVDILVTLFYGKKILGMLRVLRLLRTLRPLRVISRAPGLKLVVETLMSSLKPI
GNIVVICCAFFIIFGILGVQLFKGKFFICQGEDVRNIKNKTACLQAGYEWFHIKYNFDNL
GQALMSLFVLASKDGWVDIMYDGLDAVEEDKQPELNHNPWMLLYFISFLLIVAFFVLNMF
VGVVVENFHKCRRHQEAEENKRREEKRLKRIEKKRRNLLVPGVSWALSDGTLKEAQSKPY
YSDYSPTRLLIHKLCTSHYLDLFITIVIGLNVITMSMEHYDQPKKLTKALKNCNYIFTVI
FVLESVFKLVAFGFHRFFKDKWNQLDLIIVLLSIMGITLEEIQGNASNASNASMPINPTI
IRIMRVLRITRVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFMLLFFIFAALGVQLFGD
LICDESHPCEGLGRYANFKNFGMAFLLLFRVSTGDNWNGIMKDTLRDCSPNNGTCYFKVV
SPIYFVSFVLTAQFVLVNVVIAVLMKHLEESNKEAKEEAELEAELNLEAQMEEAMASRSP
QLNPLASGIDRLSSEDSPFRSSGGGDMEQERQSPINSPTPDITRKSVDSDAEPCSDSQLQ
FVQGRALFDSISLVIQGSMEGELNLMDNLSGSICHFYALPPRPNKHSRDKKPELRKDKVG
RTNSLPNSHMFYPPHPFGPSSPTSAQHVAQSREPQHLAASHRAKSGSRDSVHSQPEKFSQ
QLTISHSHSDSESIPQQPPTGRTLCRQSAVSTDSQEALCSIEQESSEGLTNVAASALPSC
TSSTSRSFSFSHHRQPHLHPALCPVPALLGTPSKPLPHRSVHTQQHDQHCLAFHSTSASS
SSSPHVPPPPLPVRPPQQQQEQVEAALEDQEVSFITCGGLMKNESTAVKDVGGEESGRPC
LRQLKRFHSVDTQGRSTLLPRPRPYSWLDDPRRHSLEVCSVGDPYPQRTATSTSSGSISQ
SDNLLIPAKAPLPSPRHKKKMSPPCISIDPPDELETQSGLYPSLGGMALGGLGMPPPLPS
RDTCLRRRAPSNESKDSIDLGLGEVSVQDGGSPNPNPSSKLLTLPSFSLEKTSSEH
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
gtgccctacctgcaccgcacatccagcatgcagagctccagacccccttccctgggccat
ggccgaactgcagaacacaacgactgtaatgggaagggatctccatcagccctcagccag
actaatgtctctcaagacgaaaacactgaagacgagaatgtggaggaggaggtcagccag
ggacgtttggccaggatacttcgatggatggagaaaaagcagccagaatggtgtcggcag
agagatacatggtccctctacctgttccccccggagtccagatgccgcaggcaatgtgaa
aagatcatcaaccataaaatgtttgaccatgttgtgctggtcatcatttttctcaactgc
atcaccatcgccatggagaggcctggcatcagtcctgacagtgcggagcggatcttcctg
atgtggtctgactacatctttacagcgatatttgtggcagagatgaccgtaaagatcgtg
gctcttggttggttatttgggaacaacgcctacctgaggagcagctggaacattctggat
gggatattggtgatgatttctgttgttgacatcctggtgactcttttctatggaaaaaaa
atcttgggcatgctccgagtgctgaggctgctgaggacgctcaggccgctccgcgtgatc
agcagagccccaggactgaagctggtggtggagaccctgatgtcatcgcttaagccaatc
ggcaacattgtggtgatctgctgtgccttcttcattatctttggaatccttggagtacag
cttttcaagggaaagttctttatttgccaaggggaggatgtgaggaacattaaaaacaag
actgcctgtttacaagccgggtacgagtggttccacatcaagtacaacttcgacaacctg
gggcaggctttgatgtctctttttgtacttgcttcaaaagacggatgggtggatatcatg
tatgatggcctcgatgctgtagaggaggacaaacaaccagagctgaaccacaacccatgg
atgctgctctacttcatctctttcctcctgattgtggcctttttcgtgctcaacatgttc
gtgggtgtggtggtggaaaactttcacaaatgtcggcgtcaccaggaggcagaggagaac
aagcgcagggaggagaagagactgaaacgaatagagaaaaagagacggaatttattggtt
cctggtgtgagttgggccctttctgacggcacactgaaagaagctcagagtaagccttac
tactcggattactcccccactcggctgctcatccacaagctgtgcaccagccattacctg
gacctcttcatcaccattgtcataggcctgaacgtcatcaccatgtctatggagcactac
gatcaaccgaagaaacttactaaagcactgaagaactgcaactacatcttcaccgttatt
ttcgttctggaatcagtcttcaagctggtggcattcggatttcatcgcttcttcaaggac
aagtggaaccagctggacctcatcattgtgctgctgtccatcatgggcatcactctggag
gagattcagggcaacgcctcaaacgcctccaacgcctcaatgcccatcaaccccaccatt
attcgcatcatgagagtgctgaggatcacaagagtgctgaagctcctaaagatggcggtt
ggaatgagagctctgctggacaccgttatgcaagctttgcctcaggtggggaatctgggt
ctcctcttcatgctcctcttcttcatctttgctgcgttgggagtgcaactatttggcgac
ctgatctgtgatgagagccatccatgtgagggtctgggtcgctacgctaattttaaaaac
tttgggatggcatttctgctgctcttcagagtttcgactggcgacaactggaacggcatt
atgaaggacactctgagggactgttcaccaaacaatgggacgtgttacttcaaagtggtc
tctcccatctatttcgtctcctttgtcttgactgcccagtttgtcctggtcaatgtggtc
atcgctgttctgatgaagcacttagaggagagcaataaagaggccaaagaggaggcagag
ctcgaggctgagttgaatctggaggcacaaatggaggaggcaatggcatcaagatcgccc
cagctcaaccccttagcctctggcatagacagattgagctcggaggattccccgttcagg
tcatctggaggaggagacatggagcaggaaaggcaaagtcctatcaactctcccactcct
gatataaccagaaaatctgtagacagcgatgcagaaccttgctcagactcacagctgcag
tttgtgcaggggagagcactttttgactcaatctccctggtcatccagggctctatggag
ggagagctgaatttgatggacaacctgtccggctcgatctgccacttctacgcgctgccc
cccaggcccaacaagcacagcagagacaaaaagcccgagctaagaaaggacaaagtgggg
cgcactaattctctgcccaacagccacatgttctaccccccacacccctttggcccctcc
tctccaacttcagcacagcatgtagcacagtcaagagagccccagcacttagcggctagt
cacagggccaaatcaggctccagagactcggtgcattcacagccggagaagttttcccag
cagctgaccatctcccacagccactcagactctgaaagcattccacaacaacctccaaca
ggacgcacactctgtcgacagtctgcagtgtccactgattctcaggaggccctttgttcc
attgaacaagagagtagtgaaggacttacgaatgttgcagcttcggccctaccttcatgc
acctcctccacctctcgctccttctctttctcgcatcatcgccagcctcatctgcatcca
gcgctctgccctgtacctgccctactgggtaccccctctaaacctttgcctcaccgcagc
gtgcacactcagcaacatgaccagcactgcctggccttccactccacatctgcatcttct
tcctcatccccccatgtgcctcctccccccttacctgtcaggccaccgcagcagcaacaa
gagcaggtggaggcagctttggaggatcaagaagtttccttcatcacctgtggaggactt
atgaaaaatgaaagcacagccgtgaaggatgtgggcggcgaggaaagtgggagaccatgt
ttgaggcagctgaagaggttccacagtgttgacacacagggccgtagcaccctcctgccc
cgcccacgcccttactcctggctggacgatccacgccgccactctttagaagtatgctca
gtgggggacccctacccacagcgcactgcaacctccacttcttctggctccatatcccag
tctgacaacctgctgattcccgccaaggcccccctgccttccccccgacacaagaagaaa
atgagcccaccctgcatatctattgacccacctgatgaacttgaaacccagtctggcctg
tacccaagcctcggtggcatggcactggggggattaggaatgccccctcctttgcccagc
agggacacatgtctgagaagaagagcaccctctaacgagtccaaggactcgatcgacctg
ggactgggagaggtctcagtccaggatgggggctcgccaaatcccaatcctagctccaag
ctattgactcttcccagtttctccttggagaaaacaagctccgagcactga
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