Cyprinodon variegatus (sheepshead minnow): 107095430
Help
Entry
107095430 CDS
T06110
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107095430 (fubp1)
03041 Spliceosome [BR:
cvg03041
]
107095430 (fubp1)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107095430 (fubp1)
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107095430 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
107095430
NCBI-ProteinID:
XP_015247010
Ensembl:
ENSCVAG00000014487
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSAMAGMGGPPRSSSEEFKVPDGMVGFIIGRGGEQ
ISRIQQESGCKIQIAPDSGGMPERSVTLTGGPESIQAAKRLLTEIVEKGRPAPAFHHNDG
PGMSVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGDPF
KVQQAKEMVMELIREQGFREQRGEYGSRAGGGDSLDVPVPRFAVGIVIGRNGEMIKKIQN
DTGVRIQFKPDDGTTPERIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGGRGRGRG
QGNWNMGPPGGLQEFSFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNL
KMFTVRGNPQQIDYARQLVEEKIGGPVTPLGGPHGPPGPHGGPGPHGPPGPPGPPGAPMG
PYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYAQYG
QQPQASMTPSSGAPGTAQPNGQGDPQAAGQSGQTDYTKAWEEYYKKMGQQSQPPQDYTKA
WEEYYKKQGQAAPQAAPAAAPAAAQPGGQPDYSAAWAEYYRQQAAYYGTGNPQAMGAAPQ
APQGQ
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagactatagcagcgtggctccgccgtcttctaacgctggtgggggcatgaacgat
gcttttaaagacgctctacagcgagcaagacagatcgcagccaagatcggtggagatggc
gttgcggctcccccgacgaacgagtttggctacggaggccagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgatcaaccagaaacaaagaaagta
gctacaaatgacgctttttcagccatggcaggaatgggtggcccaccaaggtcatcgtct
gaggaatttaaggttccagatggaatggttggattcattattggaagaggcggcgagcag
atatcccggattcagcaggagtctgggtgtaaaatacagattgctcctgacagtgggggc
atgcctgagaggtcggtgacattaacagggggaccggaatcaatccaggctgcaaagaga
cttttgactgagatcgttgaaaagggacgtccagctccagctttccaccacaacgacggt
ccaggaatgtctgttcaagaaatcatggtgcctgcttccaaagccggcctcgtcattggg
aagggtggagagaccatcaaaagccttcaggaacgagctggcgtgaagatggtcatgatc
caagatggaccccagaacacaggcgcagacaagccactccgcatttctggagaccccttt
aaagtccagcaagccaaagagatggtgatggagctgatcagggaacaggggttcagggag
cagaggggcgagtacggttccagggccggaggaggagacagcttagatgttccagtgcca
cgctttgcagttggaattgtcattggcagaaacggagagatgatcaagaaaatccagaac
gacacaggcgtcagaattcagttcaaaccagatgacggcaccacacctgaaaggatagca
cagatcatgggtcctccagatcaggcccaacatgcggcagagatcatttcggatctgctg
agaagcgtacaggctggaggtcccccaggacatgggggtggcagaggacgcggtcgtggg
cagggcaattggaatatggggccccctggtggtctgcaggagttctctttcacagtccca
accatgaagactggcctcattattggaaaaggaggcgagacaatcaaggggatcagccag
cagtcaggggccaggattgagctgcagaggaatcccccaccaaatgccgaccccaactta
aagatgttcacagtcagagggaaccctcaacagatcgactacgccaggcagctggtggag
gagaaaattgggggtccagttactccattggggggtccacatggtcctccaggtccacat
gggggaccaggtccacacggtccccctggaccaccaggaccccctggcgctccaatggga
ccgtacaatcctggaccttacaaccaagggcccccaggaccacatggcccccctgctcct
tatcagcctcaaggatggggtaacggttatccccactggcagcagggacagcctgatcca
aataaagcagcagccgatgccaatgcagcagcatgggcggcttactatgctcaatacggc
cagcagccacaggcctccatgactccatccagtggagctccaggcacagctcaacccaac
ggtcaaggtgacccacaggctgcaggtcagagtggacagacagattacaccaaggcctgg
gaggaatattacaagaaaatgggtcaacagagtcaaccacctcaggactacacgaaagcc
tgggaggagtattacaagaagcaaggtcaagctgctcctcaggcagcaccagcagccgca
ccagcggcggctcagcctggtggccagccagactacagcgccgcctgggcggagtactac
cgccagcaggctgcctactacggcacaggcaaccctcaggcgatgggtgcggcaccacaa
gcccctcagggccagtaa
DBGET
integrated database retrieval system
