Cyprinodon variegatus (sheepshead minnow): 107095449
Help
Entry
107095449 CDS
T06110
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107095449 (ascc3)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107095449 (ascc3)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
107095449 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
Motif
Other DBs
NCBI-GeneID:
107095449
NCBI-ProteinID:
XP_015247038
Ensembl:
ENSCVAG00000013014
LinkDB
All DBs
Position
Unknown
AA seq
2201 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKKEDPVEQLYDLKTKRLKRQELFAREGLTWQKIVHFCSEHQDK
AASQELKSLLQAAKQIVGADHGQEAIECAAVFLFETFHNKDHVGTEETRAIKQMFGPFPS
SAAEASCACVARLVAPLGDSRVEDFIQTQSSRHSAQRGSSFGRNIAFSYDFYSLDPLEDL
QESERVEQHFINFLSNQQSGNKSTGEDEVAHSGTRSGSGDGSVLQREVEKYLEGGNMISS
NPEELCTSLFEMLASQRSDDELQNELFELLGPEGLEMISVLLQRRTGIVDAFLSVPDERT
VYAPDVSRKVSGEMSKPAYGCQVTIQSEKEKQMMKIYRREEKREKKRAKGGDDSDFSEVG
VTFDPKEMRAQREQALLNARYEPVLTRERVYERIRYPNVYDSYAEATKAPAFVGGARLLL
PEGIHRENNKMFEEVEIPPSEPMAVGFQERPVYISELDEVGQLVFKGMKRLNRIQSIVFE
TAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKIVYVAPMKALAAE
MTNYFSKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQIV
RLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVAAFLHVNP
YIGLFFFDSRFRPVPLGQTFVGIKTTNKIQQLHDMEEVCYNKVLQQIKAGHQVMVFVHAR
NATVRTAFSLIEMAKNRGEICFFQPDQGPEYGQCEKQIQRSRNKQMREMFPEGFGIHHAG
MLRSDRSLMESSFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGTFVDLGILD
VMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLGSLADNLNAEVSLQ
TSSHISPFKWRSYSYLDMLRKAKPWLNVGGCCVDSWVSPQMDPALELYRKELVVECGRKL
DKARMIRFEERTGYFASTDLGRTASHFYIRYNTIETFNELFNSQRTEADILSIVSKAEEF
DQLKVRDEEMEELDMMLSSYCHLAAAGGAENSYGKVNILLQTYISRGEVDSFSLISDLSY
VAQNAARIVRALFEIALRKRWPAMTYRLLKLCKVIDKRLWDFAHPLRQFPTLSTSVLNRL
EEKRLTVDKLKEMRKDEIGHMLHHVNIGLTVKQCVHQIPALTMEASIQPITRTVLRVRLL
ITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVTKEPQHIVFTIPIFE
PLPSQYYIKAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNREFESL
YKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNKYPSSKVVYIAPL
KALVRERMEDWKVRIEEKLGKRVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQNR
SYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANARDLAD
WLGIQQVGMFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIF
VSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEAIIATVRDSNLKLTLAFGIGMHHA
GLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVDYPIT
DVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDHLNAEIAA
GTISSKQDAMDYITWTYFFRRLVMNPSYYNLEDVSHDSINKYLSGLVANSLRDLECSYCI
EIKEDDQAVEPLTYGRIASYYYLKHPTIRMFKEQLRAELTADELLTVLTDAEEYAELPVR
HNEDQLNSQLAQQLPLQVNPHSFDSPHTKTHLLLQAHFSHAQLPCSDYTTDTKTVLDNAI
RVCQAMLDVAANEGWLITALSICNLVQMIVQGRWLHDSSLLTLPHVEQHHLYLFRKWAVK
RGRSDAEGFSGAVEGLPELIAACSGKESVFSAIVSQEFTPSQTQQAWSFLSHLPVLEVQM
SVKGWWEQSQEQTERPLPAGGANLREESSWLDVHADQEYVLQVALRRINLGQQRRKQDSK
AQAPRFPKAKDEGWFLVMGEVDRKELLAVKRVGYVRNHTAVSVAFYTPEKTGKCIYTLYV
MSDSYLGLDQQYDIHLNVTPASISAQVNTEVVDSVSGLSLS
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccacgtctgacaggagctctccgctccttctctaatgtcagtaagaaggag
gatcctgttgaacagctttatgacctgaagacaaagagactgaagcgacaggagctgttt
gccagggaggggctgacctggcagaagattgtccacttctgctctgaacatcaggacaaa
gctgccagtcaggaactgaagagcctgcttcaggcagccaaacagattgttggtgcagat
cacggtcaggaagccatcgaatgtgctgctgtctttctgtttgagacctttcataacaaa
gaccatgttggcaccgaggagacccgcgccatcaagcagatgttcggccccttcccgtct
tccgctgccgaagcctcctgcgcttgcgtggctcggctggtggcgccgctcggtgactcc
agagtggaagacttcatccaaacccagagttctcgtcacagcgcccagagaggctcctcc
tttggacgcaacatcgccttctcctatgacttttattcacttgacccactggaagacctt
caggagtctgagagagtggagcaacactttatcaactttctcagtaatcagcagagcgga
aataagtccaccggtgaagatgaagtcgcccactctggaacacgttctggctctggggat
ggatctgtccttcaaagagaagtggagaaatacctggaaggagggaacatgatttcgtcc
aacccagaggagttgtgcacctccttgtttgagatgctggcctcccagaggagtgatgat
gagctgcagaacgagctttttgaactgctgggaccggagggcctggagatgatctccgtc
ctgctacagcgcaggacagggatcgtggacgccttcctctccgttccagatgaaaggact
gtttacgctccagatgtgagcagaaaggtcagcggcgaaatgagcaagcctgcctacggc
tgccaggtgaccatccaatccgagaaggagaaacaaatgatgaaaatttaccgccgagaa
gaaaagcgagagaaaaagagagccaaaggaggcgatgatagtgacttctcagaggttggg
gtaacctttgaccccaaagagatgagagctcagcgagagcaggccctgctgaatgcacgc
tacgaacccgtcctcaccagagaaagagtctatgaacggatccgataccccaacgtctac
gacagctatgcagaagcaacgaaagcaccggccttcgttggaggagccaggctgctgtta
ccagagggaatccacagagaaaacaataagatgtttgaggaggtggagatcccccccagt
gaacccatggctgtcggcttccaggagcggcccgtctacatctccgaactggatgaggtg
ggacagctggtgtttaagggaatgaagcgtctgaacaggatccagtccatagtgtttgag
acggcctacaacaccaacgaaaaccttctgatctgcgctcccactggtgccggcaagacc
aacatcgccatgctgacggtcctgcatgagatccgtcagcacctgcagcccggtggcgtc
atcaaaaaggacgaattcaagatagtgtacgtggctccaatgaaggccttagcagctgag
atgactaattacttcagtaagcgtctggaacccctgggcatcactgttaaagaactcacc
ggagacatgcagttaaccaaaggagagatccttcgaacacagatgttggtgaccacgccg
gagaagtgggacgtggtgaccaggaaaagcgtcggcgacgtggcgctctctcagattgtc
cgtctcctgatcctggatgaagtccaccttctgcatgaagaccgagggccggtgctggag
agcctggtggcgaggaccatcagacaggtggagtcgacccagagcatgatccggatcctg
gggctgtccgccactctgccaaactacctggacgtggccgccttcctgcacgtcaacccc
tacatcggcctgttcttcttcgacagccgcttcagacccgtgcctctcggacaaaccttc
gttggcatcaagaccaccaacaagatccagcagctccatgacatggaagaggtttgttac
aacaaagtcctgcagcagatcaaagccggtcatcaggtcatggtgttcgttcacgcccgc
aatgccacagtgaggacagcgttcagcttgatagagatggccaagaacagaggagaaatc
tgcttcttccagccggaccagggcccagagtacggccagtgtgaaaaacagatccaacgc
tccagaaacaagcagatgagggaaatgttcccagaaggctttgggatccaccacgctggc
atgctacgctctgaccgcagtctgatggagagcagcttctccaaaggccacctgaaggtg
ctggtctgcaccgccaccctggcctggggggtcaacctgccggcccacgccgtcatcatc
aagggaactcagatctatgatgcaaagcgtggcactttcgtggatctgggaatcctggac
gtcatgcagatctttggccgagcgggtcgacctcagttcgacaaatacggcgagggaacc
atcatcaccacccacgacaagctgagccactacctgaccctgctcacccagcagaacccc
atcgagagtcagttcctgggcagcctggccgacaacctgaacgctgaggtcagtctgcag
accagctctcacatttcaccctttaaatggagaagctattcatacctggacatgctgagg
aaagcgaagccttggctgaatgttggtggatgttgtgttgattcctgggtttctcctcag
atggatccggctctggagctctacaggaaggagctggtggtggagtgcggccggaagctg
gacaaggccaggatgatccgctttgaggagcgcaccggctacttcgcctccacggacctg
ggcaggaccgccagccacttctacatcagatacaacaccatagagacgttcaacgaactt
tttaactctcagaggactgaagcagacatcctgagcatcgtgtccaaagcagaggagttt
gatcagctgaaggtccgcgatgaagagatggaggagctggacatgatgctgtcgagctac
tgccacctcgcagcagcagggggggcggagaacagctacggcaaagtcaacatcctgctg
cagacctacatcagccggggagaggtggacagcttctcgctcatctctgacctctcctac
gtggctcagaacgcggctcggatcgtccgggcgttgttcgagatcgccctgaggaagcgc
tggcccgccatgacctaccgcctgctgaaactctgcaaggtgatcgacaagcggctgtgg
gacttcgcccacccgctccgccagttccccaccctgagcaccagcgtcctcaaccgcttg
gaggagaagaggctgactgtggacaaactgaaggagatgaggaaggatgagattggccac
atgctgcaccatgtcaacatcggactgaccgtcaagcagtgcgtccaccagatccccgcc
ctcaccatggaggccagcatccagccaatcacacgcaccgtgctacgcgtgcgcctcctc
attactcctgacttccgctggaacgaccaggtccacgggtctgtgggggagccttggtgg
ctgtgggtggaggatcccatcaacgatcacatctaccactcagagtacttccttctgcag
aagaagcaggtggtgaccaaagagcctcagcacatcgtcttcaccatccccatctttgag
ccgctgccctcgcagtactacatcaaggcggtgtcagaccgctggctgggcgctgaggct
gtgtgcatcatcaacttccagaacctcattctacctgagaggcaccccccacacaccgaa
ctgctggacctgcagccgctacctgtgaccgctctggggaaccgcgagtttgagagcctc
tacaagttcacccacttcaaccccatccagacgcagatcttccacaccctctaccacacc
gacaccaacgtcctgctgggggcgccaacaggctccgggaaaaccatcgcagctgagctg
gccatgttccgcgtcttcaacaagtatccgtcctctaaggtggtctacatcgctcctttg
aaggctctggtgagggagaggatggaagactggaaggtccggattgaggagaaactgggg
aagagagtggtggagctgacgggggacgtgactccggacatgagggccatagcacaagct
gacctcatcgtcacaacgccggagaaatgggacggagtgagcaggagctggcagaaccgg
agctacgtccagaaggtggccattctcatcatcgatgagatccacctgctgggtgaggac
cgaggccccgtgttggaggtcattgtctccaggaccaacttcatctcctcccacacctct
aagagcgtcagagtggtgggtctgtccacggctctggccaacgctcgggacctggctgac
tggctgggaatccaacaggtgggaatgtttaacttccgtccctctgtgcgtcccgtcccg
ctggaagttcacatccatggtttcccaggacagcactactgtccccgcatggccagcatg
aacaagccgaccttccaagcaatccgcagtcactcacccgccaagccggtgctgattttt
gtgtcgtccagaaggcagacccgtctaacagctctggatctaatcgcctacctggccaca
gaggacaaccctaagcagtggctgcaccaggatgagagagagatagaggccatcatcgcc
actgtgagggactccaacctgaagctgaccctggcctttgggatcggcatgcaccacgca
ggccttcatgagagggacaggaagacagtggaggagctgtttgtcaactgtaagattcag
gttctgattgccaccagtactctggcatggggagtaaactttcccgctcacctggtggtc
gtcaagggaaccgaatactacgacgggaaatccagacgctacgtggactatcccatcaca
gatgtgctgcagatgatggggcgagctggacgtcctcagtttgatgaccagggcaaagcc
gttatcctggtccatgacatcaagaaggatttctacaagaagtttctctatgaaccgttc
cctgtagagtccagcctcctcagcgtgctgtcagaccatctgaacgctgaaatcgctgct
ggaaccatctcctccaagcaggatgccatggattacatcacatggacctacttcttcaga
cggctggtgatgaaccccagttactacaacctggaagacgtcagccatgactccattaac
aaatatctgtccggcttggtggcgaacagcctgcgggacctggaatgctcctactgcata
gagataaaggaggacgatcaggcagtggagcccctgacatacggacgcattgcctcctac
tactacctgaagcatccgaccatccggatgtttaaggagcagctgagggctgagctgacg
gcggatgagctgctaactgtcctcacggatgcagaggagtacgctgagctcccggtcaga
cacaacgaggaccagctcaacagccagctggctcagcagctccctctgcaggtcaacccg
cactccttcgacagtccacacaccaagactcacctgctgctgcaggcgcacttcagccac
gctcagctcccatgcagcgactacaccaccgatacaaagactgttttggacaacgccatc
cgtgtctgccaggccatgctggatgtagctgccaacgagggctggctcatcactgccctc
agtatctgcaacctggtgcagatgatcgtccagggccgctggctgcacgactcgtcctta
ctgacccttcctcacgtggagcagcaccacctctatctgttcaggaagtgggccgttaaa
agaggaaggagtgatgctgagggcttcagcggggcggtggaaggactccctgagctcatt
gccgcttgcagcggtaaagaaagcgttttctccgccatcgtcagccaggagtttactcca
agtcaaacgcagcaggcgtggtccttcctgagtcacctcccggttctggaggtccagatg
agcgtgaagggctggtgggagcagagccaggagcagacggagcgacccctgcctgcaggg
ggcgctaacctgagagaggagagcagctggttggacgtccacgcggatcaggagtacgtc
ctgcaggtggcgctgcggcgcattaatctgggtcagcagaggaggaagcaggacagtaag
gcccaggctcccaggttccccaaggccaaggatgagggctggttcctggtcatgggggaa
gtggatcggaaggagctgctggccgtcaaacgggtcggatacgtccggaatcacacggcc
gtttctgtggccttctacactccagagaagactggaaagtgcatctacacgctgtatgtg
atgagcgacagctacctgggtctggaccagcagtatgacatccacctgaacgtcacgcct
gccagcatctccgcccaggtcaacacagaggtggtggactcagtgagcgggttgtccctc
agctaa
DBGET
integrated database retrieval system
