Cyprinodon variegatus (sheepshead minnow): 107095544
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Entry
107095544 CDS
T06110
Name
(RefSeq) trichohyalin-like
KO
K16464
centrosomal protein CEP250
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107095544
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107095544
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
107095544
Cilium and associated proteins [BR:
cvg03037
]
Other cilia and associated proteins
Other cilium assembly proteins
107095544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
107095544
NCBI-ProteinID:
XP_015247166
LinkDB
All DBs
Position
Unknown
AA seq
2223 aa
AA seq
DB search
MESDLLIGWPQQKAELEQEVCRLQEELAESRAEKEELESRSRALRERLCQTLNPSLNLSL
HEEEQRRWKTKLREWREREARQALLIHRLQNKVLEYRDRCQHLDLQLQEEQSRLRSSEQR
IRDEHSDSLESALIRLEEEQQRSSSLTDTNALLRHQLSQSEETNQALREDLQKLTADWSR
AVEESERKAADWQREKEGHVGQNQDRLLSVWRSVLDLRRHCHTVRTAADRDLWQLRAEFS
KFSSSLLLSCDSVCSSLRPKPSDLPPPSSSSPPLSSTLVLPSSNSSASPPQLSPSTLGTF
TLGELKEEEVKEKEQTVELKLLQEAEVLQLEQRVEELSRSLQAADGEKEEAKKEVERLRE
SERRLQSVGQAVVRMSRALSRTSSQTLSVSMDAVLSLDLSSLLSVLSQTESTLQWKHEEL
QGAELKLRRLGEEQTALQLRLNQQLEENQQLEENSLRTQQELKKTLDALSREKEASSSLR
LQLEEVQRREEEEKKEKDRLRRDRERLEEKTRQLEAETHRRVEEELLEKVQLSERESKQL
MEIHSLKGALEREQLDRQRAEEEGADVREALQKCRDSLLHLSSSETMLRWEAEEARDALE
KMSALNAALVSDKRDLNKQLLQLEAELSNSQSQMQTVRSEVSVLQRELQGVRSELNLLRT
QSQTDADTIHQLKEQQAELERTLVEKEAQVESLEEERQTAAQQMDESSSQHTLLREELKE
AQEQLQRAQEELKEKERHQEEQQRESRRLQQEQEGLRRHKEELEEELQELRSLSVKLHLQ
LHQQQQQLSQAEVDRCQQNTRLCTRLCTLQRAKDTLQGEIECLRGELQRETARREDEKER
RARTLEEKEELNVEMERLREEVEALRSRSSEQEAEKQEERKTWQEEREALNKELGTRDGA
LEALRRRTEGLTEEVEERQREVERLREEVAERGSKISTMMERRQRAEEEKEKLEEQIKRT
ELQLAEEEEKRREEEMQRDLETEALCERIEKLEEKKKEMEEEMNQLMIEEETWRSRAVED
KEEVKRLRKEISRLQEDREKERRQRERKQEEEKELEERLKEKVGEVELLRVRLNVAQEEK
EEMKEEVEKRERSLERQMSAVREREEEVEKLKERLRLAEEREEEGERERQLVEVRLKQKE
VREENLEALLAETQALLEKEVQEGGGKDRKISSQDRELQEAQVERERAKRRSREKEEACE
QLEEELRRWQQKEEHRGKEATELQKSIRQKQEEVLQLRATLEEKEEELREGERLRRMEEE
RKQMTEEKVKEERRRLEDRLEARMKELKEENDELRRSQEEKRRLVSKLQEIQEEEREELK
GAREQNRRLRDQLKETEEQREEKLRQLEEELRKMKEERRLQQETEKDLHLLEEERRRSRL
RTLEKEKEELQVELVRKDREVTLLREEAQREREELREEVKRKGKEKEEVKERMQEELRAR
EEEWRSKELMSKKNLQNDRQLEEVQQELRRSKKEATLLREELHKEQREKDERQERLRRSE
KEMKALREELERERSKAQEERALRLEVVNEKEELMKTEEIRQELLKSKKEAALLREEVQR
ERKEAQMARSQKVEVEQELSELRKEQKEKEEMFEKEVRSLREEVLRVKEEAHGKLQEELR
SKEVMRKKGQEEWRKLEEVQQELLRSKKELQEELMKEQQKEEKIRDELRKSRAEVSELAV
IAEEVKKEQEQIEEGLRRKEEEVRALKEEVHEAHRRSEKEVSLLQEKVQKEKQELLEELQ
KRRDEVKDLQEEVKEERQRREEVQDDLKGVQQNMEVMEESLTSLKSQVLDLSRSRERARK
EVKEKEEESQQMREGLRVALEEMTTLKALLQDSHNEGERLRSALAQKKEDMEKIREENKQ
AAKEEVEELRARVKGLEKRRKEVVEELERRREAEGRWRSQVEELEKGQEVLHIEIQTLRS
RREEEDREWRSKMEEKEEEARRRIQESQEELRRLTALMEEQKAQMDGLRRRNVQTGEDEE
EQEEEEEQVSSEKEQLRKELQKKESEFYMLTQRNKELEEERDRFRLALERTEAAMIGYRQ
RANLRTGSNPEEAVEDRLLVLQRLVAELELDQMRMKKKNSHLEQQKDKLKRARDALKDTL
RQVEEDRWRLRQQLSLGSGSQVCLVGQASENSTEVERLRHQVTELEDQLSQLRLSLAVDQ
MQRAEFIEQSSRNSQWLLSLRHDLNDSLAAVSSHPIPAVLESETQRLDRSLREEELRMSL
SQS
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggacctgctgattggctggccgcagcagaaggcggagctggagcaggaggtg
tgccgtctgcaggaggagctggcggagagccgagcagagaaggaggagctggagtccagg
agcagagctctgagggagcggctttgccagactctgaatccttctctgaacctctccctg
cacgaggaggagcagaggaggtggaaaaccaagctgagggagtggagggagagggaggcc
aggcaggcgctgctgatccaccgtctgcagaacaaggtgttggagtacagagatcgctgt
cagcatctggatctgcagctgcaggaggaacagtccaggctacggagctctgagcagaga
atcagagatgaacacagcgactccctggagagcgccctcatcaggctggaggaggaacag
cagaggtcttccagcctcaccgacaccaacgctctcctccgtcaccagctcagccaatca
gaggagacgaaccaggcgctgagagaggacctccagaagctgactgctgattggtccaga
gccgtggaggagtcggagcgcaaagcggctgattggcagagagagaaggagggtcatgtg
ggtcagaaccaggaccgcctcctgtcagtctggaggtctgtgctggatctgaggcgacac
tgtcacacagtgagaacagccgctgacagggatctctggcagctcagagcagagttctcc
aagttctcatcatctctcctcctcagctgtgactccgtctgctcctcactgaggcccaaa
ccctctgaccttcctcctccctcctcctcctctcctcctctatcctctactctcgttctc
ccttcttccaactcctcagcttctccccctcagctctctccctccacactgggaaccttc
accttaggagagctgaaagaggaggaggtgaaagagaaggagcaaacagtggagttaaag
ctgctccaggaggcggaggtgttgcagctggaacaaagggttgaggagctgagtcgctcc
ctgcaggctgcagacggagagaaggaggaggccaaaaaggaggtggagaggctgagggag
tcagagaggaggctgcagtcagtgggtcaggctgtggtcaggatgtccagggccctgagc
aggaccagcagtcagaccctgagcgtctccatggacgccgtcctcagcctggacctgtcc
tccctgctgtcagtcctgtctcagaccgagagcaccctccagtggaagcatgaggagctg
cagggggcggagctaaagctgcgtcggctcggcgaggagcaaaccgccctgcagctccga
ctgaaccagcagcttgaggagaaccagcagctggaggagaacagcctgagaacgcagcag
gagctgaagaagacgctagacgctctgagcagggagaaggaggcgtccagctccctgcgt
ctgcagctggaggaggtgcagaggagagaggaggaggagaagaaggagaaggacagactg
aggagagacagagaacgactggaggagaaaactcgacagctggaggctgaaacacacaga
cgggtggaggaggagctcctggagaaagtccagctgtcagagagagaaagcaaacagttg
atggagatccacagcctgaagggggcgctggagagggagcagctggacaggcagagagca
gaagaagaaggtgctgatgtcagagaggctctgcagaagtgcagggacagcctgctgcat
ctctcctcctcagagacgatgttgaggtgggaggcagaggaggcgcgggacgccctggag
aaaatgtcggctctgaacgccgctctggtttcagacaaacgagatctgaacaaacagctg
ctgcagctggaggcggagctatccaacagccaatcacaaatgcagacggtgaggtcagag
gtgagcgtcctgcagagggagcttcagggcgtgaggagtgagctgaacctgctgagaact
cagtcacagacagacgcagacaccatccatcagctgaaggagcagcaggcagagctggag
agaaccctggtggagaaggaggcccaggtggagtccctggaggaggagaggcagacggca
gcccagcagatggacgagagctcctcccaacacaccctgctgagggaggagctgaaggag
gcgcaggaacagctgcagagggcacaggaggagctgaaagagaaggagagacatcaggag
gagcagcagagggagagcaggaggctgcagcaagaacaggaagggctgaggagacacaag
gaggagctggaggaggagctacaggagctcaggtctctgtcggtgaagctccacctgcag
ctccatcagcagcagcagcagctgtcccaggcagaggtggacagatgtcagcagaacacg
cgcctctgcacgcgcctctgcacgctgcagcgggccaaagacaccctgcagggtgagatc
gagtgtctgagaggagaactacagcgagaaacggcaagaagagaagacgagaaggaaagg
agggcaagaaccctggaggagaaggaggagttgaatgtagaaatggagcgactgagggag
gaggtggaggcgctgcggagcagaagttctgagcaggaggcagagaagcaggaggagagg
aaaacctggcaggaagagagagaagctctgaacaaagaactggggactagggacggagcg
ctggaggccctgaggaggcgcactgaaggtctgacagaggaggtggaggagagacagaga
gaggtggagaggctgagggaggaggtggcggagagagggagcaaaatcagcaccatgatg
gagagaaggcagcgagcagaggaggagaaggagaaactggaggagcaaataaagaggaca
gagctccaactggcagaggaggaggagaagaggagagaggaggagatgcagagggattta
gaaacagaggcgctctgtgagcggatcgagaagttagaggaaaaaaagaaagaaatggag
gaggagatgaaccagctgatgattgaggaggagacatggagatctagagctgtggaggac
aaggaggaggtgaagagactgaggaaggagatctccaggttacaagaagacagagagaag
gagaggagacagagggagagaaaacaggaggaagagaaggagctagaagagaggctgaag
gagaaggtgggggaggtagagctgctaagagtgaggctgaatgtggcccaggaggagaag
gaggagatgaaggaggaggtggaaaagagggagcgcagcctggagcgacagatgagtgct
gttagggagagagaggaggaggtggaaaagctgaaggagcgtctgaggctggcagaggag
cgagaggaggaaggagagcgggagcggcagctagtggaggtcagactgaagcagaaggag
gtgcgggaggagaacctggaggcactgctggcagaaactcaggcgctcctggagaaggag
gtacaagagggaggaggaaaagacagaaaaatctcctcccaggacagggagttgcaggag
gctcaggttgagagagaaagagcaaagaggaggtccagagagaaggaggaggcctgtgag
cagctcgaggaggagctaaggaggtggcagcaaaaggaagagcatcgtgggaaggaggcg
acagagctccagaagagcattaggcagaaacaagaggaggtgctgcagttgagggccaca
ctggaggagaaggaggaggagctgagggaaggagaaaggctgagaagaatggaggaggag
agaaagcaaatgactgaggagaaagtgaaggaggagaggaggaggttagaggacaggctg
gaagcaagaatgaaagagctgaaggaggaaaacgatgagctgaggaggagtcaggaggag
aagagacgactggtcagcaaactgcaggagatacaggaggaggaaagagaggagctgaag
ggagcgagggagcaaaataggaggctgagggaccagctgaaagagacggaggagcagaga
gaggagaaactgagacaactggaggaggaactgaggaaaatgaaggaggagagaaggctg
caacaggaaacagagaaagatctccacctcctggaggaggaaagaaggaggtccaggctg
aggacgttagagaaggagaaggaagaactgcaggtggagctggtaagaaaggacagggag
gtgacactccttagagaggaagcacagagggagagagaggagctcagagaggaggtgaaa
agaaagggaaaggagaaggaggaggtcaaagaaaggatgcaggaggaactgagagctaga
gaggaggagtggaggtcaaaggagctgatgagcaagaaaaatttgcagaatgacaggcaa
ctggaggaggtccagcaggagctaaggaggagcaaaaaggaagcgactctcctcagagag
gagctccacaaggagcaaagagaaaaggatgagaggcaggagcggctgaggaggtctgag
aaagagatgaaagcgctcagagaggagttggagagagagcggagcaaggcacaggaggag
agagctctgagactggaggtagtaaatgaaaaagaggagttaatgaagacggaggagatc
cgccaggagctgctgaagagcaaaaaggaggcagctctcctgagagaggaggtgcagagg
gaaaggaaggaggcacagatggctaggagtcagaaagtggaggtagaacaggagctttct
gaactgagaaaggagcaaaaggaaaaggaggagatgtttgaaaaggaggtaaggtctctc
agagaggaggtgctcagagtgaaggaggaggcccatgggaagctgcaggaggaactcagg
tctaaggaggtaatgaggaagaaggggcaagaggagtggaggaagttggaggaggtccag
caggagttactgaggagcaaaaaggagctccaagaggagctgatgaaggagcaacaaaag
gaggaaaagatccgcgatgaactgaggaagagtagggcggaggttagcgagctggcagtc
attgctgaggaggtgaaaaaggaacaggagcagatagaggaggggctacgaaggaaagag
gaggaggtaagggctctaaaagaggaggtgcatgaggctcacaggaggagtgagaaggag
gtgtctctccttcaagagaaggttcaaaaggaaaaacaggagctcctggaggagctgcag
aagaggagagatgaggtcaaagaccttcaggaggaggtgaaggaggagcgccagaggagg
gaggaggtgcaagacgacttgaaaggtgttcagcaaaacatggaggtgatggaggagagc
ctgacctccctgaagagtcaggtgttggatctgagccgcagccgggagcgagcacgaaag
gaggtgaaggagaaggaggaggagagccagcagatgagagaaggcctaagggtggccctg
gaggagatgactactctgaaggctctccttcaggacagccacaacgagggggagcgtctg
aggagcgcgctggcccagaagaaggaggacatggagaaaatcagagaggagaacaagcag
gcggctaaggaggaggtggaggagctgagggccagagtcaaaggtctggagaagagaagg
aaggaggtggtggaggagctggagaggaggagggaggctgaggggaggtggaggagtcaa
gtggaagagttggagaaagggcaggaggttctgcacatagagatccagacactaaggagt
agacgggaggaggaagacagagagtggaggtccaagatggaggagaaggaggaggaggca
aggaggaggatccaggagagtcaagaagagctgagaaggttgacagcattgatggaggag
cagaaagctcagatggatggactgaggaggagaaacgtccagacaggagaggatgaggag
gagcaagaggaagaggaggagcaggtttcctctgagaaggagcagctgaggaaggagctg
caaaagaaagagtctgagttctacatgctgacgcagaggaacaaggagctggaggaggag
cgggaccggttccgattggctctggagcggacagaggccgccatgattggctacaggcag
cgagcaaacctcaggactggttctaacccagaggaggctgtggaggacagactgctggtc
ctgcagcgactggtggctgaactggagctcgaccagatgaggatgaagaagaagaattcc
cacctggaacagcagaaagacaagctgaagagggccagagatgcactgaaggacacactg
agacaggtggaggaggatcgatggaggctcaggcagcagctctccctcggctctgggtcc
caggtgtgtttggttggtcaggcgtctgagaactccaccgaggtcgagcggctgagacac
caggtgacagagctggaggaccagttgagtcagctgcgtctctcattggctgtggaccag
atgcagagggcggagtttattgagcagtcgtccagaaacagccaatggctgctctctctg
cggcacgacctcaacgattcgctggctgccgtctccagccatccaatcccagccgttctg
gagtctgaaacgcagcgattggaccgcagcctgagggaggaggagcttaggatgtctctg
agccaatcataa
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integrated database retrieval system
