Cyprinodon variegatus (sheepshead minnow): 107095679
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Entry
107095679 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U-like
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107095679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107095679
Spliceosome [BR:
cvg03041
]
Common components
Common spliceosomal components
hnRNP proteins
107095679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
CPT
AAA_22
AAA_18
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
107095679
NCBI-ProteinID:
XP_015247377
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MSTLNVKKLKVNELKDELKKRNLSDKGLKAELMDRLQAALDEEALAGDSSAAQEGSGDDG
FEQSVEQECIGEGEGMGEEEEGEGPVEESMEANQEEAENEGDGNGVAEDEEMGEGEDGGE
EDDEMDPMLKADVDDMEKIEDGEPGDNAAEGDADKDTNADQKNKKGVKRRREEHGRGYFE
FIEENKYSCASFKSPVPPLEEEDEECDETKVCLDTCRFFFFLPHCPKHKIXLFMEWRRNQ
FVEAVFLIRFQLTEKISVKHISSKNLEINDVQVGWSLSTGTLLLGEEEFSYGYSCKGKKT
TNCVTEDFGETYEENDVICCLIDFEGEEVVISFAKNGGEPAVAFRVLKDCLNGQALFPHV
ICRNCAVEFNFGQMETPYFPQPEGYTFLQQIPVDERVRGLKGPQTKADCEIIVMVGLPGS
GKTTWVKNQVEQNPGKYYILSSDTIVDKMMINSLKRQSKDITKLSAISQRAPLFLGKFIE
IAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVFPSDEEYKKRVQKKVESDGKEV
PEHALLKMKGFYALPEEGESFSEVTYAELPKEDAAKLLEQYKEESKTALPAEKKPNQGSS
TPKRGGNQSGSRGGGARGGGRGGKNQFGRSGQGQRGGGRGNFQNRGNFRGGPGPRGVFSG
FPRGCIPPPIFRGGVPRPGFRRGGGGPLPSLAGAPRGGPMRGNMGPRGGPMSRGGPMNRG
GQMGRGGQMNRGGGGNMNRNANRGPPAHFQQRGGGGRGNFGQKNSNFGNRNSGNFGNRNG
MDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccttaacgtgaagaagctcaaagttaacgagctgaaggacgagctaaagaag
cggaatctgtcggataaggggctgaaggccgagctgatggatcgcctgcaggccgcgttg
gacgaagaggccctcgccggagactcctcggcggctcaggaaggttcgggcgatgatggg
ttcgaacagtcggtggaacaagagtgtataggagagggagagggcatgggagaagaagaa
gaaggcgagggtccggtagaggagagcatggaggcaaaccaggaggaagcggagaatgaa
ggcgacggcaacggcgtcgccgaggacgaagagatgggtgagggggaagacggaggggaa
gaagacgacgaaatggatcccatgctcaaggctgatgtagacgatatggaaaaaatcgaa
gacggtgagcccggagacaacgccgcagagggggatgcggacaaagacacgaatgctgat
cagaagaataagaagggtgttaagagacgccgggaggaacatggaaggggctactttgaa
tttattgaagagaacaaatacagctgcgcctcttttaagtctcctgtaccccccttggag
gaagaagatgaagagtgtgatgagacgaaagtctgcctggatacctgtaggtttttcttt
tttttacctcattgcccaaaacataaaatttaactgtttatggagtggcgtagaaatcag
tttgttgaagccgtttttctcatccgattccagctgacagagaagatttcagtgaagcac
atctccagcaagaacctagagattaatgatgttcaggttggatggtccctgtctactggt
actctgcttctgggtgaggaggagttctcttacggatactcctgcaaagggaagaagacc
accaactgtgtgacagaagactttggtgaaacgtacgaggagaacgacgtcatctgctgc
ctcattgactttgagggtgaggaggtcgttatctcctttgccaagaatggtggagaacca
gctgttgccttcagggtcctcaaagactgtctgaatggccaggctctcttcccacatgtc
atctgtcgcaactgtgctgtggagtttaactttggccagatggagactccgtacttcccc
cagcctgagggctacaccttcctgcagcaaatccctgttgatgagcgagtgcggggcctg
aagggcccccagactaaggctgactgtgagatcattgtgatggttggcctgccgggctca
gggaaaactacctgggtgaagaaccaggttgagcagaaccctgggaaatactacatcctg
agcagcgacaccattgtggataagatgatgattaacagtttgaaacgccagtccaaggat
atcaccaagctgagcgccatttcccaaagagctccacttttcttgggaaaattcattgag
atcgccgctcgcaagaagaggaactacattctggatcatactaacctatctgcacccggc
cagaagaggaagatgtgtttgtttgccgggttccagcgtaaggctgtggtggtcttccct
tcagacgaggagtacaagaaacgagtccagaagaaggtggagagtgacggcaaggaagtt
ccggagcacgctttgctcaaaatgaaaggcttctacgccctgcctgaggaaggagaaagc
ttcagcgaggtcacgtatgccgagctgcccaaggaggacgccgccaagctgctggagcag
tacaaggaggagagcaagacggccctgcctgctgagaagaagcccaaccaaggcagcagc
acccctaagagaggcggtaatcaaagcgggtctcgtggaggcggagctcgtggcggcggc
cggggaggcaagaatcagtttggacgcagtggacagggacagaggggtggcggtcgtgga
aacttccagaacagaggcaacttcagaggaggtcccggcccgcgcggcgtcttcagcggt
ttcccccgtggctgtatacctccaccaatcttcaggggaggggtcccccggcctgggttt
aggcggggcggcggtggtccactccccagcctggccggagccccaagaggtggaccgatg
aggggaaacatgggaccccgaggaggacccatgagcagaggcggtccgatgaacagaggc
ggccaaatgggcagagggggtcagatgaacagaggaggcggaggcaacatgaaccgcaac
gccaacaggggacctcccgcccacttccagcagagaggcggaggaggccgtggaaacttt
ggccagaaaaacagcaactttggcaacaggaacagcggcaactttggcaacaggaacggc
atggacaaggcccaagccttcaaccagagctggcagcaagggttctggaaccagaagcct
tggagccagcagtatcagcctggatattactga
DBGET
integrated database retrieval system
