Cyprinodon variegatus (sheepshead minnow): 107095786
Help
Entry
107095786 CDS
T06110
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107095786 (chd1l)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107095786 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
AAA_22
SWI2_SNF2
Selenoprotein_S
DUF7230
End_beta_propel
Motif
Other DBs
NCBI-GeneID:
107095786
NCBI-ProteinID:
XP_015247566
Ensembl:
ENSCVAG00000002595
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MSDLLEKIKNKIAEKEKTALSQSDLQKFGLTGIQLRSYQLDGVQWLSQSLKHQQGCILGD
EMGLGKTCQTISLLVYMFGALGKKGPFLVLSPLSVMENWRKELESFAPSLTLLSYKGDKE
RRAEIQRETNTQAFHVLLTTYELCLKDASFLKRWSWQVLVVDEAHRLKNQNSLLHQTLTE
FTVGFRLLLTGTPIQNNLKELYSLLSFIQPNIFTPNETDSFVSSYSNLKSQPALASELQS
VLEPFLLRRVKSEVALDLPKKTELVVYHGMSALQKKYYKASLMKDYEAFANEQGSQNRML
NILMNLRKCVDHPYLFDGVEPEPFQIGEHLIEASGKLCILDSILAFLHKGGHRVLLFSQM
KRMLDILQDYMEYRGYSYERLDGSVRGEERNLAVKNFSSQDIFVFLLSTKAGGVGLNLTA
ADTAIFVDTDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAVSKLQLTNT
VIEEGRFSLMDQAQSAAAGLKLSEILKFGVDKLLSSDESSIEEVKLEKILGPSREGQWVD
DDEELSPLRVDEEEMEKGSDSEEQNHMYVFEGKDYSKDPSSEDQKSFDRLLEEQMAEFKK
AAGEGRALRQKAGVLLPVALAIPARKRKPLTEAELELRRQRRQEAAAKKAKMMEDKKKEQ
QEEKHRKKMAWWESCGYRSLCLQPVDSEEEERNEDEEDDSSVCSTDSNTTDICYVLGDVT
HPHTAKGDAVIVHCVDDSGRWGRGGLFTALELRSDEPRKQYELAGRMKDLELGNVFLFPI
DDKQSRMNGRDQLALIVAQQRDKANNLSGILLSALEEGLKRIYSAAKRDGASVHLPRIGH
STKGFNWYGTERLIRKHLASRGIPTFIYYHSRIVKKTASPQVPNTSTAASKAPLLSSGGP
DDEAETEAPGPSNPQHSFSPAELPSFMKGVRVFFYNISASQRKKLARYLMTYDGDEEDIM
SEEVTHIVAEVENHIQKQELQELLRQYQQAVPVKKTWLESCFSKQQKVNTLHFQHQF
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttattggagaaaataaaaaacaaaatagcagagaaagaaaaaacggcttta
agtcagagcgacctgcagaagtttggtttaacagggatccagctgagatcctaccagctg
gacggggtgcagtggctgagccagagcctcaaacaccagcagggatgcatcctgggagat
gagatgggtttgggtaaaacctgccagacaatctctttgctggtttacatgtttggagct
ctgggaaagaaaggcccgtttttggtgctcagcccactctctgtcatggagaactggaga
aaggagctggagagctttgccccgtctctgactctgctgagctacaagggagacaaggag
agacgggctgagattcagagggagacgaacacacaagccttccatgttctgctcaccaca
tacgagctgtgtctcaaagatgcttcattcttgaagaggtggagctggcaggtgcttgtc
gtagacgaagctcaccggctgaagaaccaaaactctttgttacaccaaaccctgaccgag
tttaccgttggtttcagactcctgctcacagggactcccatccagaacaacctgaaggag
ctctactccctgctgagcttcattcaacccaacatcttcacgcccaacgagaccgacagc
tttgtcagctcttactccaatctaaaaagccagcctgctctggcttcagagcttcaaagc
gtcttggagccttttctgctccgtagagtgaagtcagaggtggctttggatctgcccaag
aagacggagctggtggtgtaccacggcatgtccgctttgcagaagaaatactacaaggcc
agtcttatgaaagattacgaggcatttgcaaatgaacaaggcagccagaacaggatgctg
aacatcttaatgaatttgagaaagtgtgtcgaccacccgtatctgtttgatggggtggaa
ccagagccctttcagatcggggaacatctcatagaagccagcggaaaactgtgcatccta
gacagcatcctggccttcctgcacaaagggggccaccgtgtcctgttgttctctcaaatg
aagcggatgctggatattctccaggactatatggagtacagaggctacagctacgagcgt
ctggacgggtccgttcgaggggaggaacgaaacctcgctgtgaagaacttcagcagccag
gatatctttgtgtttttactcagcactaaagcaggtggcgttggcctcaacctcacagct
gctgacacagctatattcgtggataccgacttcaatcctcagaacgaccttcaggctgca
gctcgctgtcatcggattggccagaacaggcccgtgaaagtcatccgcctcctcgccaga
gacaccgtggaggagatcatgtactccagagccgtctctaagctgcagctcaccaacacc
gtcatcgaagagggacgcttctccctgatggatcaggctcagtcggctgcagcaggcctg
aagctgagtgagatcttgaagtttggagtagataagcttttatcatctgatgagagctcg
atagaggaggtaaagctggagaagatcctcggcccgtcgagggagggtcagtgggtggac
gatgacgaggaattatctccactgagagtagatgaagaggagatggagaaggggtctgat
tctgaggagcagaatcacatgtacgtctttgaagggaaagactacagcaaggacccgagc
tcagaggaccagaagagcttcgatcggctgctggaagagcagatggccgagtttaagaag
gcagcaggagagggacgagctctgcgccaaaaagccggagttttgctcccggttgcctta
gcgattccagcaagaaagaggaaacctctcaccgaggcagagctggagctcagacggcaa
aggaggcaggaggctgcagccaagaaagccaaaatgatggaggacaaaaagaaggagcag
caagaggaaaagcacagaaaaaaaatggcctggtgggagtcttgcggctataggtcgctt
tgcctgcagcctgtggacagtgaagaagaggagaggaacgaagatgaagaggacgacagc
agtgtttgctccacagactcaaacactacggatatctgctatgttcttggggacgttacc
catccccacactgctaagggagatgctgttattgtccactgtgttgatgactcgggccga
tggggcagaggaggcctctttacagcactggagttgaggtcagatgaaccacgaaagcag
tacgagttggcaggaaggatgaaagatttggagctaggaaatgtgttcctcttccccatc
gatgacaagcagtcgagaatgaacggcagagatcagctagccctgatagtggcgcagcag
agagacaaagccaacaacctgtctgggatcctccttagtgctttggaagaaggactgaag
aggatttactctgcagccaagagagacggtgccagcgttcatcttcctcgcatcggtcac
tccaccaaaggtttcaactggtatggcacagagaggctcatcagaaagcacctagcttcc
aggggcatccccactttcatatattatcacagcagaatcgtcaagaaaacagcttcacct
caggtgcctaatacatcaaccgctgcctctaaagcacctttattgagctcaggcgggcca
gatgatgaggcggaaacagaggccccaggaccctcaaatccacaacatagcttcagcccg
gcagagctccccagcttcatgaagggggtcagagtatttttctacaacatttctgcatca
caacggaagaagctggcccgctaccttatgacgtatgatggagatgaggaagacattatg
agtgaagaggtcacccacattgttgcagaggtggagaaccacatccagaaacaggagctt
caggagcttctccgtcagtaccagcaagctgttcccgtgaagaagacctggctggagtcc
tgcttctccaaacaacaaaaagtcaacactctgcactttcaacatcagttctaa
DBGET
integrated database retrieval system
