Cyprinodon variegatus (sheepshead minnow): 107095999
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Entry
107095999 CDS
T06110
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107095999 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107095999 (dcp1b)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107095999 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
107095999 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
107095999
NCBI-ProteinID:
XP_015247920
Ensembl:
ENSCVAG00000015026
UniProt:
A0A3Q2D2Y0
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSSPASSSCLSTKGLDISLSALQRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEGTL
FIYTRLASPRHGFTIMNRLSVENLTEPITKDLDFQLQDPFLLYRNARLVIYGIWFYDKQD
CQHIAQKMRSLTQQEQILAQSHGGSISPAAAAGGGGGGGGGGGGVGLVGGNNETKAVDII
QMLTKARSEYHKSASEPKEIGGSSVLCGNPNLIKPIPVKPTTQVSEGAEALLGSEHQHHH
ALKSEVPPVARPPVARTLTYEDSVNSGRNAAPTGGVDTGVKLIDGEDSGNAPHQLPNQIQ
HCPAIAKLMQGPRGAAGAGGVLQTLSESPENRLCDNGVLFQHHHPHLHHHHHHQQLLTHH
HHQEQHHHHDPIKRFLQGHPPPPLATSFTFPGSQALHQIPHLASQAAQVDSVSRSHLEAQ
QGQQLLLSLVKLQTEIQQRGQADPAATGTGLSSQMQSVVSPHELLQKLQLVQQEQSLTPH
EHHRTHPHPGLAPRFHGSSQNQSTGSTFGSAPTQISGVQDQKIEPQFQIISPQRIPATVA
PTLLLSPSVFSQAKPSSRPPAVAPDSRSATSTLHKPSLPEEVTALSKSQLQAALLHLIQS
DSSFLDSIYEAYVSRFANGSSSKY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccagctagcagtagctgtctttctactaaaggactggacataagtctgtct
gccctgcagagacaagacccctacataaacaacattgtggacgtggccagccaggtcgcc
ctgtatacctataataacagggcgaatgagtgggaaaagacagaagtggagggcactttg
tttatttacacaagattggcatctcccaggcatggtttcacgataatgaaccgtcttagt
gttgagaatctgacagagcccatcacaaaagacttggacttccagctgcaggatcctttc
ctcctttaccggaatgcacgattggttatttatgggatctggttctacgataagcaggac
tgtcaacatattgcgcaaaagatgcggagtttgacccagcaggagcagatcctggctcag
tctcacggtggatccatatcaccagcagcagcagcaggaggaggaggaggaggaggagga
ggcggaggaggtgttggtttagttgggggaaataatgagaccaaagcggttgacatcatt
cagatgttgactaaggcacgatcagaataccacaagtctgcctcagagccaaaggagatt
ggaggcagcagtgttctttgtggaaaccctaacctcattaaaccaattccagttaaacca
accacccaggtcagtgaaggtgcagaagctctgttaggctctgaacatcaacatcaccac
gctcttaaatctgaagttcctcctgttgcccgcccacccgttgcacgcactctgacctac
gaggattcagtcaactctggcaggaatgccgcccccacaggtggtgtagacacaggagtc
aagctgatagatggggaagacagtgggaacgcgccacatcagctgccgaaccaaatccaa
cactgtccggccattgcaaagctcatgcagggaccaaggggggcagcaggagctggtggc
gtactacaaacactgtctgagtcccccgagaaccggttgtgtgataacggagtgctgttc
caacaccaccacccccacctccaccatcatcaccatcaccagcagctcctcacccatcac
caccaccaggagcagcaccaccaccatgatccaataaagagattcctgcagggccatcca
cctcctccacttgccacttctttcaccttccctggttctcaggctttgcaccagatccct
catctcgcctcccaggctgcccaagtggattctgtctcacggtcccacctggaagcacaa
caaggtcagcagctgctcctcagcctggtgaagttacagacagaaatacagcagagaggg
caggcagatcctgctgctacaggaacaggtctgtcatcccagatgcaaagtgtggtttct
cctcacgagctcctccagaaactccagctggtccagcaggaacagagcctgactcctcat
gaacatcatcggactcatcctcatccaggactagcgcctcgatttcatggatccagtcag
aatcaaagtacaggctcaacctttggctcagccccaacccagatttcaggtgtccaagat
caaaaaattgagccacaatttcagatcatctccccccagcggatacctgccacagtggcc
cccactctgctcctctctcccagtgtgttctctcaggcaaagcccagcagcaggccgccg
gctgttgctccagacagccgctctgcaacctcaaccttacacaaaccctcactgccagag
gaggtcacagctctctctaaaagccagcttcaagcagcactgctgcatctgattcagtct
gacagctcattcctggactccatctatgaagcatacgtcagccgctttgctaacggctcc
agcagcaagtactga
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